RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Swt1Q9DBQ9 907 aa20.58■□□□□ 0.88
Cux1-206ENSMUST00000176172 Gprasp1Q5U4C1 1347 aa20.57■□□□□ 0.88
Cux1-206ENSMUST00000176172 Fyb1O35601 819 aa20.57■□□□□ 0.88
Cux1-206ENSMUST00000176172 Usp16Q99LG0 825 aa20.57■□□□□ 0.88
Cux1-206ENSMUST00000176172 Ak7Q9D2H2 614 aa20.57■□□□□ 0.88
Cux1-206ENSMUST00000176172 Becn1O88597 448 aa20.56■□□□□ 0.88
Cux1-206ENSMUST00000176172 Naip1Q9QWK5 1403 aa20.56■□□□□ 0.88
Cux1-206ENSMUST00000176172 Ift140E9PY46 1464 aa20.56■□□□□ 0.88
Cux1-206ENSMUST00000176172 Gsdma3Q5Y4Y6 464 aa20.55■□□□□ 0.88
Cux1-206ENSMUST00000176172 Tpd52l1O54818 204 aa20.55■□□□□ 0.88
Cux1-206ENSMUST00000176172 Sh3bgrQ9WUZ7 214 aa20.55■□□□□ 0.88
Cux1-206ENSMUST00000176172 Atp2b2Q9R0K7 1198 aa20.55■□□□□ 0.88
Cux1-206ENSMUST00000176172 Ric3Q8BPM6 367 aa20.54■□□□□ 0.88
Cux1-206ENSMUST00000176172 Prkrip1Q9CWV6 186 aaKnown RBP20.54■□□□□ 0.88
Cux1-206ENSMUST00000176172 KinQ8K339 391 aa20.54■□□□□ 0.88
Cux1-206ENSMUST00000176172 Zfp644E9QA22 1323 aa20.54■□□□□ 0.88
Cux1-206ENSMUST00000176172 Kiaa0754Q69ZZ9 979 aa20.54■□□□□ 0.88
Cux1-206ENSMUST00000176172 Cetn4Q8K4K1 168 aa20.53■□□□□ 0.88
Cux1-206ENSMUST00000176172 Rad54l2Q99NG0 1466 aa20.53■□□□□ 0.88
Cux1-206ENSMUST00000176172 VgfQ0VGU4 617 aa20.53■□□□□ 0.88
Cux1-206ENSMUST00000176172 Tpm3P21107 285 aaKnown RBP20.52■□□□□ 0.88
Cux1-206ENSMUST00000176172 Rnf20Q5DTM8 973 aa20.52■□□□□ 0.88
Cux1-206ENSMUST00000176172 Trim30aP15533 496 aa20.52■□□□□ 0.87
Cux1-206ENSMUST00000176172 Gm21969J3QJZ1 289 aa20.51■□□□□ 0.87
Cux1-206ENSMUST00000176172 Rfx1P48377 963 aa20.51■□□□□ 0.87
Cux1-206ENSMUST00000176172 Rabep1O35551 862 aa20.5■□□□□ 0.87
Cux1-206ENSMUST00000176172 Evc2Q8K1G2 1220 aa20.5■□□□□ 0.87
Cux1-206ENSMUST00000176172 NrkQ9R0G8 1455 aa20.5■□□□□ 0.87
Cux1-206ENSMUST00000176172 Rbm25B2RY56 838 aaKnown RBP20.5■□□□□ 0.87
Cux1-206ENSMUST00000176172 Eif2s2Q99L45 331 aaKnown RBP20.5■□□□□ 0.87
Cux1-206ENSMUST00000176172 Srek1Q8BZX4 494 aaKnown RBP20.49■□□□□ 0.87
Cux1-206ENSMUST00000176172 Q9D9H8 365 aa20.49■□□□□ 0.87
Cux1-206ENSMUST00000176172 Q9D2X8 372 aa20.48■□□□□ 0.87
Cux1-206ENSMUST00000176172 Cd109Q8R422 1442 aa20.48■□□□□ 0.87
Cux1-206ENSMUST00000176172 Plekhh1Q80TI1 1356 aa20.48■□□□□ 0.87
Cux1-206ENSMUST00000176172 Ush1cQ9ES64 910 aa20.48■□□□□ 0.87
Cux1-206ENSMUST00000176172 Duox2A2AQ99 1517 aa20.47■□□□□ 0.87
Cux1-206ENSMUST00000176172 Arhgap31A6X8Z5 1425 aa20.47■□□□□ 0.87
Cux1-206ENSMUST00000176172 Urb2E9Q7L1 1524 aaKnown RBP20.47■□□□□ 0.87
Cux1-206ENSMUST00000176172 Gpatch11Q3UFS4 262 aa20.47■□□□□ 0.87
Cux1-206ENSMUST00000176172 Q8C5K5 320 aa20.47■□□□□ 0.87
Cux1-206ENSMUST00000176172 Ddx11Q6AXC6 880 aa20.46■□□□□ 0.87
Cux1-206ENSMUST00000176172 Pank1Q8K4K6 548 aa20.46■□□□□ 0.87
Cux1-206ENSMUST00000176172 TatQ8QZR1 454 aa20.46■□□□□ 0.87
Cux1-206ENSMUST00000176172 PhaxQ9JJT9 385 aaKnown RBP20.46■□□□□ 0.87
Cux1-206ENSMUST00000176172 Ttll5Q8CHB8 1328 aa20.46■□□□□ 0.87
Cux1-206ENSMUST00000176172 Erc2Q6PH08 957 aa20.45■□□□□ 0.87
Cux1-206ENSMUST00000176172 Cfdp1O88271 295 aaKnown RBP20.45■□□□□ 0.86
Cux1-206ENSMUST00000176172 Map3k5O35099 1380 aa20.45■□□□□ 0.86
Cux1-206ENSMUST00000176172 Znf710Q3U288 666 aa20.44■□□□□ 0.86
Cux1-206ENSMUST00000176172 Myom3A2ABU4 1439 aa20.44■□□□□ 0.86
Cux1-206ENSMUST00000176172 Ccdc171E9Q1U1 1324 aa20.44■□□□□ 0.86
Cux1-206ENSMUST00000176172 Phactr2B1AVP0 632 aa20.43■□□□□ 0.86
Cux1-206ENSMUST00000176172 Cavin4A2AMM0 362 aa20.43■□□□□ 0.86
Cux1-206ENSMUST00000176172 Ppp2r1aQ76MZ3 589 aa20.43■□□□□ 0.86
Cux1-206ENSMUST00000176172 Mical1Q8VDP3 1048 aa20.43■□□□□ 0.86
Cux1-206ENSMUST00000176172 Sv2bQ8BG39 683 aa20.42■□□□□ 0.86
Cux1-206ENSMUST00000176172 KarsQ99MN1 595 aaKnown RBP20.42■□□□□ 0.86
Cux1-206ENSMUST00000176172 Fam163aQ8CAA5 168 aa20.42■□□□□ 0.86
Cux1-206ENSMUST00000176172 Tpm1P58771 284 aa20.42■□□□□ 0.86
Cux1-206ENSMUST00000176172 Rab3gap2Q8BMG7 1366 aa20.42■□□□□ 0.86
Cux1-206ENSMUST00000176172 Q7TT23 1179 aa20.41■□□□□ 0.86
Cux1-206ENSMUST00000176172 Nectin2P32507 530 aa20.41■□□□□ 0.86
Cux1-206ENSMUST00000176172 Mcm2P97310 904 aa20.41■□□□□ 0.86
Cux1-206ENSMUST00000176172 Krt82Q99M74 516 aa20.41■□□□□ 0.86
Cux1-206ENSMUST00000176172 Map3k1P53349 1493 aa20.41■□□□□ 0.86
Cux1-206ENSMUST00000176172 Cplx1P63040 134 aa20.4■□□□□ 0.86
Cux1-206ENSMUST00000176172 Smc3Q9CW03 1217 aaKnown RBP20.4■□□□□ 0.86
Cux1-206ENSMUST00000176172 Arhgef5E9Q7D5 1581 aa20.4■□□□□ 0.86
Cux1-206ENSMUST00000176172 Ccdc183A2AJB1 534 aa20.4■□□□□ 0.86
Cux1-206ENSMUST00000176172 NexnQ7TPW1 607 aa20.4■□□□□ 0.86
Cux1-206ENSMUST00000176172 Fgd6Q69ZL1 1399 aa20.4■□□□□ 0.86
Cux1-206ENSMUST00000176172 A0A1L1SQF0 893 aa20.39■□□□□ 0.86
Cux1-206ENSMUST00000176172 Slc4a2P13808 1237 aaKnown RBP20.39■□□□□ 0.85
Cux1-206ENSMUST00000176172 Neurod6P48986 337 aa20.39■□□□□ 0.85
Cux1-206ENSMUST00000176172 Utp3Q9JI13 469 aaKnown RBP20.38■□□□□ 0.85
Cux1-206ENSMUST00000176172 Gm7298A0A0N4SVU1 1476 aa20.38■□□□□ 0.85
Cux1-206ENSMUST00000176172 Gripap1Q8VD04 806 aa20.38■□□□□ 0.85
Cux1-206ENSMUST00000176172 Bicd2Q921C5 820 aa20.38■□□□□ 0.85
Cux1-206ENSMUST00000176172 Arhgap5P97393 1501 aa20.38■□□□□ 0.85
Cux1-206ENSMUST00000176172 CrcpO35427 148 aa20.37■□□□□ 0.85
Cux1-206ENSMUST00000176172 SkilQ60665 675 aa20.37■□□□□ 0.85
Cux1-206ENSMUST00000176172 HypkQ9CR41 129 aa20.37■□□□□ 0.85
Cux1-206ENSMUST00000176172 Kif4P33174 1231 aa20.37■□□□□ 0.85
Cux1-206ENSMUST00000176172 Gnl3lQ6PGG6 577 aaKnown RBP20.37■□□□□ 0.85
Cux1-206ENSMUST00000176172 Ipo7Q9EPL8 1038 aaKnown RBP20.37■□□□□ 0.85
Cux1-206ENSMUST00000176172 Dhx16G3X8X0 1044 aaKnown RBP20.37■□□□□ 0.85
Cux1-206ENSMUST00000176172 Kri1Q8VDQ9 704 aaKnown RBP20.37■□□□□ 0.85
Cux1-206ENSMUST00000176172 Ttll13A4Q9F6 804 aa20.36■□□□□ 0.85
Cux1-206ENSMUST00000176172 Cchcr1Q8K2I2 770 aa20.36■□□□□ 0.85
Cux1-206ENSMUST00000176172 BccipQ9CWI3 316 aa20.36■□□□□ 0.85
Cux1-206ENSMUST00000176172 Vps53Q8CCB4 832 aa20.36■□□□□ 0.85
Cux1-206ENSMUST00000176172 PogzQ8BZH4 1409 aaKnown RBP20.36■□□□□ 0.85
Cux1-206ENSMUST00000176172 Tpm2P58774 284 aa20.35■□□□□ 0.85
Cux1-206ENSMUST00000176172 Zfp444Q3TDV8 331 aaKnown RBP20.35■□□□□ 0.85
Cux1-206ENSMUST00000176172 Arap1Q4LDD4 1452 aa20.35■□□□□ 0.85
Cux1-206ENSMUST00000176172 Plekhg5Q66T02 1073 aa20.35■□□□□ 0.85
Cux1-206ENSMUST00000176172 Atf3Q60765 181 aa20.35■□□□□ 0.85
Cux1-206ENSMUST00000176172 Nek4Q9Z1J2 792 aa20.35■□□□□ 0.85
Cux1-206ENSMUST00000176172 Cyp46a1Q9WVK8 500 aa20.34■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms