RNA–Protein interactions for RNA: ENSMUST00000167755.2

Trim9-203, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-203ENSMUST00000167755 Magi3Q9EQJ9 1476 aa11.74□□□□□ -0.53
Trim9-203ENSMUST00000167755 Lmo7E9PYF4 1699 aaKnown RBP11.74□□□□□ -0.53
Trim9-203ENSMUST00000167755 PrkcshO08795 521 aa11.74□□□□□ -0.53
Trim9-203ENSMUST00000167755 Arhgef40Q3UPH7 1517 aa11.74□□□□□ -0.53
Trim9-203ENSMUST00000167755 Zfp444Q3TDV8 331 aaKnown RBP11.74□□□□□ -0.53
Trim9-203ENSMUST00000167755 HnrnpmQ9D0E1 729 aaKnown RBP11.74□□□□□ -0.53
Trim9-203ENSMUST00000167755 Rprd2Q6NXI6 1469 aaKnown RBP11.74□□□□□ -0.53
Trim9-203ENSMUST00000167755 Chmp4bQ9D8B3 224 aaKnown RBP11.73□□□□□ -0.53
Trim9-203ENSMUST00000167755 Stk31Q99MW1 1018 aa11.73□□□□□ -0.53
Trim9-203ENSMUST00000167755 Rock1P70335 1354 aa11.73□□□□□ -0.53
Trim9-203ENSMUST00000167755 Ksr2Q3UVC0 959 aa11.73□□□□□ -0.53
Trim9-203ENSMUST00000167755 Cluap1Q8R3P7 413 aa11.73□□□□□ -0.53
Trim9-203ENSMUST00000167755 Adgrb2Q8CGM1 1561 aa11.72□□□□□ -0.53
Trim9-203ENSMUST00000167755 Nol10Q5RJG1 687 aaKnown RBP11.72□□□□□ -0.53
Trim9-203ENSMUST00000167755 DekQ7TNV0 380 aaKnown RBP11.72□□□□□ -0.53
Trim9-203ENSMUST00000167755 Ncoa1P70365 1447 aa11.72□□□□□ -0.53
Trim9-203ENSMUST00000167755 L3mbtl2P59178 703 aa11.72□□□□□ -0.53
Trim9-203ENSMUST00000167755 Irx3P81067 507 aa11.72□□□□□ -0.53
Trim9-203ENSMUST00000167755 GphnQ8BUV3 769 aaKnown RBP11.71□□□□□ -0.53
Trim9-203ENSMUST00000167755 TatQ8QZR1 454 aa11.7□□□□□ -0.54
Trim9-203ENSMUST00000167755 Atp10dQ8K2X1 1416 aa11.7□□□□□ -0.54
Trim9-203ENSMUST00000167755 Dnajc5P60904 198 aa11.69□□□□□ -0.54
Trim9-203ENSMUST00000167755 Plekhg5Q66T02 1073 aa11.69□□□□□ -0.54
Trim9-203ENSMUST00000167755 Prex2Q3LAC4 1598 aa11.69□□□□□ -0.54
Trim9-203ENSMUST00000167755 PnnO35691 725 aaKnown RBP11.69□□□□□ -0.54
Trim9-203ENSMUST00000167755 Chrna2Q91X60 512 aa11.68□□□□□ -0.54
Trim9-203ENSMUST00000167755 Rfx7F8VPJ6 1459 aa11.68□□□□□ -0.54
Trim9-203ENSMUST00000167755 Shroom2A2ALU4 1481 aa11.68□□□□□ -0.54
Trim9-203ENSMUST00000167755 Trappc8E9PWG2 1437 aa11.68□□□□□ -0.54
Trim9-203ENSMUST00000167755 Sf3b2Q3UJB0 878 aaKnown RBP11.67□□□□□ -0.54
Trim9-203ENSMUST00000167755 Ppp2r1aQ76MZ3 589 aa11.67□□□□□ -0.54
Trim9-203ENSMUST00000167755 GsdmaQ9EST1 446 aa11.66□□□□□ -0.54
Trim9-203ENSMUST00000167755 Spryd3E9Q9B3 442 aa11.66□□□□□ -0.54
Trim9-203ENSMUST00000167755 PrxO55103 1391 aa11.66□□□□□ -0.54
Trim9-203ENSMUST00000167755 Rapgef6Q5NCJ1 1609 aa11.65□□□□□ -0.54
Trim9-203ENSMUST00000167755 Hsp90b1P08113 802 aaKnown RBP11.65□□□□□ -0.54
Trim9-203ENSMUST00000167755 Chmp7Q8R1T1 451 aa11.65□□□□□ -0.54
Trim9-203ENSMUST00000167755 Chmp3Q9CQ10 224 aa11.65□□□□□ -0.54
Trim9-203ENSMUST00000167755 Pik3c2gO70167 1506 aa11.65□□□□□ -0.55
Trim9-203ENSMUST00000167755 Sh3bp5Q9Z131 463 aa11.64□□□□□ -0.55
Trim9-203ENSMUST00000167755 Lmtk2Q3TYD6 1471 aa11.64□□□□□ -0.55
Trim9-203ENSMUST00000167755 Gm10471E9Q1C7 252 aa11.64□□□□□ -0.55
Trim9-203ENSMUST00000167755 CatipB9EKE5 520 aa11.64□□□□□ -0.55
Trim9-203ENSMUST00000167755 Zranb3Q6NZP1 1069 aa11.64□□□□□ -0.55
Trim9-203ENSMUST00000167755 Ccdc30Q8BVF4 654 aa11.63□□□□□ -0.55
Trim9-203ENSMUST00000167755 Ttc21bQ0HA38 1315 aa11.63□□□□□ -0.55
Trim9-203ENSMUST00000167755 Kif16bB1AVY7 1312 aa11.63□□□□□ -0.55
Trim9-203ENSMUST00000167755 Gtf3c3Q3TMP1 882 aa11.62□□□□□ -0.55
Trim9-203ENSMUST00000167755 EspnQ9ET47 871 aa11.62□□□□□ -0.55
Trim9-203ENSMUST00000167755 Pank1Q8K4K6 548 aa11.62□□□□□ -0.55
Trim9-203ENSMUST00000167755 Mbd3Q9Z2D8 285 aaKnown RBP11.62□□□□□ -0.55
Trim9-203ENSMUST00000167755 Peg3Q3URU2 1571 aa11.62□□□□□ -0.55
Trim9-203ENSMUST00000167755 Cdk19Q8BWD8 501 aa11.62□□□□□ -0.55
Trim9-203ENSMUST00000167755 Adcy10Q8C0T9 1614 aa11.62□□□□□ -0.55
Trim9-203ENSMUST00000167755 Apaf1O88879 1249 aa11.61□□□□□ -0.55
Trim9-203ENSMUST00000167755 Sart3Q9JLI8 962 aaKnown RBP11.61□□□□□ -0.55
Trim9-203ENSMUST00000167755 FanciQ8K368 1330 aa11.61□□□□□ -0.55
Trim9-203ENSMUST00000167755 Dnai2A2AC93 623 aa11.61□□□□□ -0.55
Trim9-203ENSMUST00000167755 Fbln2P37889 1221 aa11.61□□□□□ -0.55
Trim9-203ENSMUST00000167755 Rassf8Q8CJ96 419 aa11.6□□□□□ -0.55
Trim9-203ENSMUST00000167755 Mlh3A0A1Y7VMP7 1443 aa11.6□□□□□ -0.55
Trim9-203ENSMUST00000167755 Dmrt2Q8BG36 561 aa11.6□□□□□ -0.55
Trim9-203ENSMUST00000167755 Wdr7Q920I9 1489 aa11.6□□□□□ -0.55
Trim9-203ENSMUST00000167755 GnpatP98192 678 aa11.59□□□□□ -0.55
Trim9-203ENSMUST00000167755 Liat1Q810M6 228 aa11.59□□□□□ -0.55
Trim9-203ENSMUST00000167755 Zpr1Q62384 459 aa11.59□□□□□ -0.55
Trim9-203ENSMUST00000167755 Ccdc60Q8C4J0 545 aa11.59□□□□□ -0.55
Trim9-203ENSMUST00000167755 Ccar1Q8CH18 1146 aaKnown RBP11.59□□□□□ -0.55
Trim9-203ENSMUST00000167755 OvosQ3UU35 1456 aa11.59□□□□□ -0.55
Trim9-203ENSMUST00000167755 Atp7aQ64430 1491 aa11.59□□□□□ -0.55
Trim9-203ENSMUST00000167755 Gm21698A0A087WQP8 267 aa11.59□□□□□ -0.55
Trim9-203ENSMUST00000167755 Gm21671G3UY31 267 aa11.59□□□□□ -0.55
Trim9-203ENSMUST00000167755 Sugp2Q8CH09 1067 aa11.58□□□□□ -0.56
Trim9-203ENSMUST00000167755 HnrnpuQ8VEK3 800 aaKnown RBP11.58□□□□□ -0.56
Trim9-203ENSMUST00000167755 Abca5Q8K448 1642 aa11.58□□□□□ -0.56
Trim9-203ENSMUST00000167755 Nup160Q9Z0W3 1402 aaKnown RBP11.58□□□□□ -0.56
Trim9-203ENSMUST00000167755 Bcl2l13P59017 434 aa11.58□□□□□ -0.56
Trim9-203ENSMUST00000167755 Gapvd1Q6PAR5 1458 aa11.58□□□□□ -0.56
Trim9-203ENSMUST00000167755 Zranb1Q7M760 708 aa11.57□□□□□ -0.56
Trim9-203ENSMUST00000167755 Cc2d1aQ8K1A6 943 aa11.57□□□□□ -0.56
Trim9-203ENSMUST00000167755 Cdk13Q69ZA1 1511 aaKnown RBP11.57□□□□□ -0.56
Trim9-203ENSMUST00000167755 Mug2P28666 1451 aa11.57□□□□□ -0.56
Trim9-203ENSMUST00000167755 Ssh2Q5SW75 1423 aa11.57□□□□□ -0.56
Trim9-203ENSMUST00000167755 Ppm1gQ61074 542 aa11.57□□□□□ -0.56
Trim9-203ENSMUST00000167755 Dnai1Q8C0M8 701 aa11.57□□□□□ -0.56
Trim9-203ENSMUST00000167755 Kdm3bQ6ZPY7 1562 aa11.56□□□□□ -0.56
Trim9-203ENSMUST00000167755 Ttll13A4Q9F6 804 aa11.56□□□□□ -0.56
Trim9-203ENSMUST00000167755 Anapc15P60007 132 aa11.56□□□□□ -0.56
Trim9-203ENSMUST00000167755 Polr3aB2RXC6 1390 aa11.56□□□□□ -0.56
Trim9-203ENSMUST00000167755 Fancd2Q80V62 1450 aa11.56□□□□□ -0.56
Trim9-203ENSMUST00000167755 Acsbg1Q99PU5 721 aa11.56□□□□□ -0.56
Trim9-203ENSMUST00000167755 Nutm1Q8BHP2 1126 aa11.55□□□□□ -0.56
Trim9-203ENSMUST00000167755 Rab3gap2Q8BMG7 1366 aa11.55□□□□□ -0.56
Trim9-203ENSMUST00000167755 Kdm6bQ5NCY0 1641 aa11.55□□□□□ -0.56
Trim9-203ENSMUST00000167755 Map7O88735 730 aa11.55□□□□□ -0.56
Trim9-203ENSMUST00000167755 MpripP97434 1024 aa11.55□□□□□ -0.56
Trim9-203ENSMUST00000167755 Caskin1Q6P9K8 1431 aa11.55□□□□□ -0.56
Trim9-203ENSMUST00000167755 Slc4a10Q5DTL9 1118 aa11.54□□□□□ -0.56
Trim9-203ENSMUST00000167755 Asxl1P59598 1514 aa11.54□□□□□ -0.56
Trim9-203ENSMUST00000167755 Nectin2P32507 530 aa11.54□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms