RNA–Protein interactions for RNA: ENSMUST00000163559.7

Ccr9-202, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-202ENSMUST00000163559 Usp54Q8BL06 1588 aaKnown RBP20.32■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Gapvd1Q6PAR5 1458 aa20.32■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Prkrip1Q9CWV6 186 aaKnown RBP20.31■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Nsd2Q8BVE8 1365 aa20.31■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Cfap74Q3UY96 1578 aa20.3■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Ttll13A4Q9F6 804 aa20.29■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Tubgcp6G5E8P0 1769 aa20.29■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Ecm2Q5FW85 670 aa20.29■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Lemd3Q9WU40 921 aa20.29■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Abcc6Q9R1S7 1498 aa20.28■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Cep170Q6A065 1588 aa20.28■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Rab3gap2Q8BMG7 1366 aa20.28■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Plch2A2AP18 1501 aa20.27■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Abcc3B2RX12 1523 aa20.27■□□□□ 0.84
Ccr9-202ENSMUST00000163559 Ppip5k1A2ARP1 1436 aa20.26■□□□□ 0.83
Ccr9-202ENSMUST00000163559 NhsB1AV60 1647 aa20.26■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Setd1aE9PYH6 1716 aa20.26■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Ttc21bQ0HA38 1315 aa20.25■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Polr3glQ8R0C0 218 aa20.25■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Rwdd1Q9CQK7 243 aa20.25■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Gm16486A0A1D5RMD1 1434 aa20.25■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Kif1bQ60575 1816 aaKnown RBP20.25■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Tex14Q7M6U3 1450 aa20.25■□□□□ 0.83
Ccr9-202ENSMUST00000163559 ShprhQ7TPQ3 1674 aa20.24■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Pdcd11Q6NS46 1862 aaKnown RBP20.24■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Gas2l2Q5SSG4 860 aa20.24■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Trim26Q99PN3 545 aa20.24■□□□□ 0.83
Ccr9-202ENSMUST00000163559 ErbinQ80TH2 1402 aa20.23■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Chd1P40201 1711 aa20.22■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Robo2Q7TPD3 1470 aa20.22■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Ccdc30Q8BVF4 654 aa20.21■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Hdac5Q9Z2V6 1113 aa20.21■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Ythdc2B2RR83 1445 aaKnown RBP20.21■□□□□ 0.83
Ccr9-202ENSMUST00000163559 Kidins220E9Q9B7 1793 aa20.2■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Rangap1P46061 589 aaKnown RBP20.2■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Golga2Q921M4 999 aa20.19■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Ccdc27Q3V036 639 aa20.19■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Abca8bQ8K440 1620 aa20.19■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Stag3O70576 1240 aa20.19■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Ylpm1Q9R0I7 1386 aaKnown RBP20.18■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Puf60Q3UEB3 564 aaKnown RBP20.18■□□□□ 0.82
Ccr9-202ENSMUST00000163559 ArxO35085 564 aa20.17■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Tspyl2Q7TQI8 677 aa20.17■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Chmp5Q9D7S9 219 aa20.17■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Atp1b4Q99ME6 356 aa20.16■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Armcx1Q9CX83 456 aa20.16■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Sbno1Q689Z5 1390 aa20.16■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Zranb1Q7M760 708 aa20.16■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Atxn3Q9CVD2 355 aa20.16■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Hecw1Q8K4P8 1604 aa20.15■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Xrn1P97789 1719 aaKnown RBP20.15■□□□□ 0.82
Ccr9-202ENSMUST00000163559 CanxP35564 591 aaKnown RBP20.15■□□□□ 0.82
Ccr9-202ENSMUST00000163559 4930567H17RikQ3V0K5 233 aa20.14■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Stk26Q99JT2 416 aa20.14■□□□□ 0.82
Ccr9-202ENSMUST00000163559 Pank1Q8K4K6 548 aa20.13■□□□□ 0.81
Ccr9-202ENSMUST00000163559 Neurl4Q5NCX5 1563 aa20.12■□□□□ 0.81
Ccr9-202ENSMUST00000163559 Plekhh1Q80TI1 1356 aa20.12■□□□□ 0.81
Ccr9-202ENSMUST00000163559 AatkQ80YE4 1365 aa20.11■□□□□ 0.81
Ccr9-202ENSMUST00000163559 Myo3aQ8K3H5 1613 aa20.1■□□□□ 0.81
Ccr9-202ENSMUST00000163559 Usp19Q3UJD6 1360 aa20.1■□□□□ 0.81
Ccr9-202ENSMUST00000163559 Igf1rQ60751 1373 aa20.09■□□□□ 0.81
Ccr9-202ENSMUST00000163559 Arid4bA2CG63 1314 aaKnown RBP20.08■□□□□ 0.81
Ccr9-202ENSMUST00000163559 PtprtQ99M80 1454 aa20.08■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Mink1Q9JM52 1308 aa20.08■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Trim30dE9PWL0 497 aa20.08■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Apaf1O88879 1249 aa20.08■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Iqcf3Q9D498 203 aa20.07■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Abca6Q8K441 1624 aa20.07■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Kdm2bQ6P1G2 1309 aa20.07■□□□□ 0.8
Ccr9-202ENSMUST00000163559 DaxxO35613 739 aa20.07■□□□□ 0.8
Ccr9-202ENSMUST00000163559 EspnQ9ET47 871 aa20.07■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Kiaa1107Q80TK0 1369 aa20.06■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Col17a1Q07563 1470 aa20.06■□□□□ 0.8
Ccr9-202ENSMUST00000163559 P2rx7Q9Z1M0 595 aa20.04■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Mbd3Q9Z2D8 285 aaKnown RBP20.04■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Nos1Q9Z0J4 1429 aa20.03■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Atf7ipQ7TT18 1306 aa20.03■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Pola1P33609 1465 aa20.03■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Sart3Q9JLI8 962 aaKnown RBP20.03■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Myo5cE9Q1F5 1742 aa20.03■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Kiaa1210E9Q0C6 1637 aa20.03■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Zfyve16Q80U44 1528 aa20.03■□□□□ 0.8
Ccr9-202ENSMUST00000163559 TnikP83510 1323 aa20.02■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Uggt2E9Q4X2 1504 aa20.02■□□□□ 0.8
Ccr9-202ENSMUST00000163559 Abca17E9PX95 1733 aa20.02■□□□□ 0.8
Ccr9-202ENSMUST00000163559 AU022751B1B0V2 589 aa20.01■□□□□ 0.79
Ccr9-202ENSMUST00000163559 U2af1Q9D883 239 aaKnown RBP20.01■□□□□ 0.79
Ccr9-202ENSMUST00000163559 Ptch1Q61115 1434 aa20.01■□□□□ 0.79
Ccr9-202ENSMUST00000163559 Uspl1Q3ULM6 1089 aa20■□□□□ 0.79
Ccr9-202ENSMUST00000163559 Senp3Q9EP97 568 aaKnown RBP20■□□□□ 0.79
Ccr9-202ENSMUST00000163559 AnkarA2RT91 1465 aa20■□□□□ 0.79
Ccr9-202ENSMUST00000163559 GsdmaQ9EST1 446 aa20■□□□□ 0.79
Ccr9-202ENSMUST00000163559 Exosc9Q9JHI7 438 aaKnown RBP20■□□□□ 0.79
Ccr9-202ENSMUST00000163559 PrkcshO08795 521 aa19.99■□□□□ 0.79
Ccr9-202ENSMUST00000163559 Abca9Q8K449 1623 aa19.99■□□□□ 0.79
Ccr9-202ENSMUST00000163559 NudcO35685 332 aaKnown RBP19.98■□□□□ 0.79
Ccr9-202ENSMUST00000163559 IqubQ8CDK3 788 aa19.98■□□□□ 0.79
Ccr9-202ENSMUST00000163559 4933416C03RikQ3V063 378 aa19.98■□□□□ 0.79
Ccr9-202ENSMUST00000163559 Kdm5aQ3UXZ9 1690 aa19.98■□□□□ 0.79
Ccr9-202ENSMUST00000163559 Ksr2Q3UVC0 959 aa19.97■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms