RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Tpm4Q6IRU2 248 aa15.61■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Gm21190A0A0G2JGJ6 266 aa15.61■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Cplx1P63040 134 aa15.61■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Polr3gQ6NXY9 223 aa15.61■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Kif4P33174 1231 aa15.6■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Q9D2X8 372 aa15.6■□□□□ 0.09
Gm28043-201ENSMUST00000130871 A0A1L1SQF0 893 aa15.6■□□□□ 0.09
Gm28043-201ENSMUST00000130871 WrnO09053 1401 aa15.6■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Ddx11Q6AXC6 880 aa15.6■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Ric3Q8BPM6 367 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Usp16Q99LG0 825 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Tomm22Q9CPQ3 142 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Gnai1B2RSH2 354 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Gnai3Q9DC51 354 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Gprasp1Q5U4C1 1347 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Smc3Q9CW03 1217 aaKnown RBP15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Rpgrip1lQ8CG73 1264 aa15.59■□□□□ 0.09
Gm28043-201ENSMUST00000130871 Rec8Q8C5S7 591 aa15.58■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Drc7Q6V3W6 876 aa15.58■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Tdrd9Q14BI7 1383 aa15.57■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Cetn4Q8K4K1 168 aa15.57■□□□□ 0.08
Gm28043-201ENSMUST00000130871 KarsQ99MN1 595 aaKnown RBP15.57■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Q8C5K5 320 aa15.56■□□□□ 0.08
Gm28043-201ENSMUST00000130871 PhaxQ9JJT9 385 aaKnown RBP15.56■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Fbxo2Q80UW2 297 aa15.56■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Prkrip1Q9CWV6 186 aaKnown RBP15.56■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Taf3Q5HZG4 932 aa15.56■□□□□ 0.08
Gm28043-201ENSMUST00000130871 ErbinQ80TH2 1402 aa15.55■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Dhx16G3X8X0 1044 aaKnown RBP15.55■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Sycp2Q9CUU3 1500 aa15.55■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Swt1Q9DBQ9 907 aa15.55■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Erc2Q6PH08 957 aa15.55■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Neurod6P48986 337 aa15.54■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Cecr2E9Q2Z1 1453 aa15.54■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Arid4aF8VPQ2 1261 aaKnown RBP15.54■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Pank1Q8K4K6 548 aa15.54■□□□□ 0.08
Gm28043-201ENSMUST00000130871 CrcpO35427 148 aa15.54■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Gsto1O09131 240 aa15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Ccdc34Q3UI66 367 aa15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Cc2d2bA0A286YDU8 1405 aa15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Crybg2B7ZCC2 1516 aa15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Cfdp1O88271 295 aaKnown RBP15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Rbm25B2RY56 838 aaKnown RBP15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Hook1Q8BIL5 728 aa15.53■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Ccdc183A2AJB1 534 aa15.52■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Noc3lQ8VI84 807 aaKnown RBP15.52■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Odf2A3KGV1 830 aaKnown RBP15.52■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Hmgn5Q9JL35 406 aa15.52■□□□□ 0.08
Gm28043-201ENSMUST00000130871 Fyb1O35601 819 aa15.52■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Nectin2P32507 530 aa15.52■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Gsdma3Q5Y4Y6 464 aa15.52■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Dhx29Q6PGC1 1365 aaKnown RBP15.52■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Nsd2Q8BVE8 1365 aa15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 PnisrA2AJT4 805 aaKnown RBP15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Jph4Q80WT0 628 aa15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ccp110Q7TSH4 1004 aa15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Chmp4cQ9D7F7 232 aa15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Cchcr1Q8K2I2 770 aa15.51■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Hmox1P14901 289 aa15.5■□□□□ 0.07
Gm28043-201ENSMUST00000130871 PogkQ80TC5 607 aa15.5■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Gpatch3Q8BIY1 525 aa15.5■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Nek4Q9Z1J2 792 aa15.5■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ankrd36D3Z4K0 1415 aa15.5■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ccdc173A0JLY1 547 aa15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Kif3aP28741 701 aa15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Mad1l1Q9WTX8 717 aaKnown RBP15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Samd1D3YXK1 519 aa15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ttll13A4Q9F6 804 aa15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Sv2bQ8BG39 683 aa15.49■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Dixdc1Q80Y83 711 aa15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 NaspQ99MD9 773 aaKnown RBP15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 NexnQ7TPW1 607 aa15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Nutm1Q8BHP2 1126 aa15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Puf60Q3UEB3 564 aaKnown RBP15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ccdc43Q9CR29 222 aaKnown RBP15.48■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Ppm1fQ8CGA0 452 aa15.47■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Hnrnpul1Q8VDM6 859 aaKnown RBP15.47■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Plekhh1Q80TI1 1356 aa15.47■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Cyp46a1Q9WVK8 500 aa15.47■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Mcm2P97310 904 aa15.47■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Fam193aQ8CGI1 1231 aaKnown RBP15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Atad2bE9Q166 1460 aaKnown RBP15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Cfap99A0A140LIX9 648 aa15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 SkilQ60665 675 aa15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Wdr78E9PYY5 807 aa15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Znhit6Q3UFB2 460 aaKnown RBP15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 Nol12Q8BG17 217 aa15.46■□□□□ 0.07
Gm28043-201ENSMUST00000130871 EzrP26040 586 aaKnown RBP15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ubxn4Q8VCH8 506 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Soga1E1U8D0 1418 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 FanciQ8K368 1330 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 FosbP13346 338 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ttll5Q8CHB8 1328 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Synj1Q8CHC4 1574 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Trim29Q8R2Q0 587 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Atp2b2Q9R0K7 1198 aa15.45■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Pde4cQ3UEI1 686 aa15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Usp48Q3V0C5 1052 aa15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Zrsr2Q62377 462 aaKnown RBP15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Znf710Q3U288 666 aa15.44■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms