RNA–Protein interactions for RNA: ENSMUST00000129269.7

Stag1-206, Transcript of Cohesin subunit SA-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag1, Length 6,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-206ENSMUST00000129269 Cnnm1Q0GA42 951 aa17.26■□□□□ 0.35
Stag1-206ENSMUST00000129269 Irx3P81067 507 aa17.26■□□□□ 0.35
Stag1-206ENSMUST00000129269 Fmnl2A2APV2 1086 aa17.25■□□□□ 0.35
Stag1-206ENSMUST00000129269 Ddx11Q6AXC6 880 aa17.25■□□□□ 0.35
Stag1-206ENSMUST00000129269 Ccdc47Q9D024 483 aaKnown RBP17.25■□□□□ 0.35
Stag1-206ENSMUST00000129269 Gm21680A0A0G2JGR8 267 aa17.25■□□□□ 0.35
Stag1-206ENSMUST00000129269 Noc3lQ8VI84 807 aaKnown RBP17.25■□□□□ 0.35
Stag1-206ENSMUST00000129269 MpripP97434 1024 aa17.24■□□□□ 0.35
Stag1-206ENSMUST00000129269 Ccp110Q7TSH4 1004 aa17.24■□□□□ 0.35
Stag1-206ENSMUST00000129269 CadpsQ80TJ1 1355 aa17.24■□□□□ 0.35
Stag1-206ENSMUST00000129269 CrcpO35427 148 aa17.24■□□□□ 0.35
Stag1-206ENSMUST00000129269 Cfdp1O88271 295 aaKnown RBP17.23■□□□□ 0.35
Stag1-206ENSMUST00000129269 Triml2E9PW10 424 aa17.23■□□□□ 0.35
Stag1-206ENSMUST00000129269 NexnQ7TPW1 607 aa17.22■□□□□ 0.35
Stag1-206ENSMUST00000129269 Dennd6aQ8BH65 605 aa17.22■□□□□ 0.35
Stag1-206ENSMUST00000129269 Krt82Q99M74 516 aa17.22■□□□□ 0.35
Stag1-206ENSMUST00000129269 Tceal9Q9DD24 104 aa17.22■□□□□ 0.35
Stag1-206ENSMUST00000129269 Plagl1Q9JLQ4 704 aa17.22■□□□□ 0.35
Stag1-206ENSMUST00000129269 FanciQ8K368 1330 aa17.22■□□□□ 0.35
Stag1-206ENSMUST00000129269 R3hcc1Q8BSI6 488 aa17.21■□□□□ 0.35
Stag1-206ENSMUST00000129269 Tpd52l1O54818 204 aa17.21■□□□□ 0.34
Stag1-206ENSMUST00000129269 Gm21663A0A0G2JE01 267 aa17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 Gm7361D3Z6R1 267 aa17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 5031410I06RikE9Q4E0 267 aa17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 Gm1979E9QAN3 267 aa17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 Gm5862K7N5V5 267 aa17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 Gm10220K7N660 267 aa17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 Plb1Q3TTY0 1478 aa17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 Zscan10Q3URR7 782 aa17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 EspnQ9ET47 871 aa17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 Dapk1Q80YE7 1442 aa17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 PnisrA2AJT4 805 aaKnown RBP17.2■□□□□ 0.34
Stag1-206ENSMUST00000129269 Nectin2P32507 530 aa17.19■□□□□ 0.34
Stag1-206ENSMUST00000129269 Gm7298A0A0N4SVU1 1476 aa17.19■□□□□ 0.34
Stag1-206ENSMUST00000129269 Gnl3lQ6PGG6 577 aaKnown RBP17.19■□□□□ 0.34
Stag1-206ENSMUST00000129269 Ccer1Q9CQL2 403 aa17.19■□□□□ 0.34
Stag1-206ENSMUST00000129269 Mphosph10Q810V0 681 aaKnown RBP17.19■□□□□ 0.34
Stag1-206ENSMUST00000129269 GnpatP98192 678 aa17.18■□□□□ 0.34
Stag1-206ENSMUST00000129269 Polr1aO35134 1717 aaKnown RBP17.18■□□□□ 0.34
Stag1-206ENSMUST00000129269 Esx1O88933 382 aa17.18■□□□□ 0.34
Stag1-206ENSMUST00000129269 Abl1P00520 1123 aa17.18■□□□□ 0.34
Stag1-206ENSMUST00000129269 TefQ9JLC6 301 aa17.18■□□□□ 0.34
Stag1-206ENSMUST00000129269 Nolc1E9Q5C9 702 aaKnown RBP17.18■□□□□ 0.34
Stag1-206ENSMUST00000129269 Gm21969J3QJZ1 289 aa17.17■□□□□ 0.34
Stag1-206ENSMUST00000129269 Fkbp4P30416 458 aa17.17■□□□□ 0.34
Stag1-206ENSMUST00000129269 Paf1Q8K2T8 535 aa17.17■□□□□ 0.34
Stag1-206ENSMUST00000129269 BccipQ9CWI3 316 aa17.17■□□□□ 0.34
Stag1-206ENSMUST00000129269 Bicdl1A0JNT9 577 aa17.17■□□□□ 0.34
Stag1-206ENSMUST00000129269 Ell2Q3UKU1 639 aa17.17■□□□□ 0.34
Stag1-206ENSMUST00000129269 Ccdc141E9Q8Q6 1531 aa17.17■□□□□ 0.34
Stag1-206ENSMUST00000129269 Cc2d2aQ8CFW7 1633 aa17.16■□□□□ 0.34
Stag1-206ENSMUST00000129269 Cdk19Q8BWD8 501 aa17.16■□□□□ 0.34
Stag1-206ENSMUST00000129269 Cd109Q8R422 1442 aa17.16■□□□□ 0.34
Stag1-206ENSMUST00000129269 Ric3Q8BPM6 367 aa17.16■□□□□ 0.34
Stag1-206ENSMUST00000129269 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.15■□□□□ 0.34
Stag1-206ENSMUST00000129269 Plekhd1B2RPU2 505 aa17.15■□□□□ 0.34
Stag1-206ENSMUST00000129269 Gimap6Q8K349 305 aa17.14■□□□□ 0.33
Stag1-206ENSMUST00000129269 Ipo9Q91YE6 1041 aa17.14■□□□□ 0.33
Stag1-206ENSMUST00000129269 HypkQ9CR41 129 aa17.14■□□□□ 0.33
Stag1-206ENSMUST00000129269 Mapk8ip1Q9WVI9 707 aa17.14■□□□□ 0.33
Stag1-206ENSMUST00000129269 Gm973E9Q295 1059 aa17.14■□□□□ 0.33
Stag1-206ENSMUST00000129269 ApobrQ8VBT6 942 aa17.14■□□□□ 0.33
Stag1-206ENSMUST00000129269 Fam50bQ9WTJ8 334 aa17.14■□□□□ 0.33
Stag1-206ENSMUST00000129269 Egfem1Q8C088 590 aa17.13■□□□□ 0.33
Stag1-206ENSMUST00000129269 Nutm1Q8BHP2 1126 aa17.13■□□□□ 0.33
Stag1-206ENSMUST00000129269 Smarce1O54941 411 aaKnown RBP17.13■□□□□ 0.33
Stag1-206ENSMUST00000129269 Rock1P70335 1354 aa17.13■□□□□ 0.33
Stag1-206ENSMUST00000129269 Gimap5Q8BWF2 308 aa17.12■□□□□ 0.33
Stag1-206ENSMUST00000129269 Sv2bQ8BG39 683 aa17.12■□□□□ 0.33
Stag1-206ENSMUST00000129269 Top2aQ01320 1528 aaKnown RBP17.1■□□□□ 0.33
Stag1-206ENSMUST00000129269 Dnai1Q8C0M8 701 aa17.1■□□□□ 0.33
Stag1-206ENSMUST00000129269 Erich6bQ9D4S6 220 aa17.1■□□□□ 0.33
Stag1-206ENSMUST00000129269 Cux1P53564 1515 aa17.1■□□□□ 0.33
Stag1-206ENSMUST00000129269 Ift140E9PY46 1464 aa17.09■□□□□ 0.33
Stag1-206ENSMUST00000129269 Gnai1B2RSH2 354 aa17.09■□□□□ 0.33
Stag1-206ENSMUST00000129269 Strn4P58404 760 aa17.09■□□□□ 0.33
Stag1-206ENSMUST00000129269 Swt1Q9DBQ9 907 aa17.09■□□□□ 0.33
Stag1-206ENSMUST00000129269 Gnai3Q9DC51 354 aa17.09■□□□□ 0.33
Stag1-206ENSMUST00000129269 PogzQ8BZH4 1409 aaKnown RBP17.09■□□□□ 0.33
Stag1-206ENSMUST00000129269 FosbP13346 338 aa17.09■□□□□ 0.33
Stag1-206ENSMUST00000129269 TkfcQ8VC30 578 aa17.08■□□□□ 0.33
Stag1-206ENSMUST00000129269 Neo1P97798 1493 aa17.08■□□□□ 0.32
Stag1-206ENSMUST00000129269 Chmp4cQ9D7F7 232 aa17.08■□□□□ 0.32
Stag1-206ENSMUST00000129269 Rbm25B2RY56 838 aaKnown RBP17.07■□□□□ 0.32
Stag1-206ENSMUST00000129269 Zeb2Q9R0G7 1215 aa17.07■□□□□ 0.32
Stag1-206ENSMUST00000129269 ZgpatQ8VDM1 511 aa17.07■□□□□ 0.32
Stag1-206ENSMUST00000129269 Ipo8Q7TMY7 1010 aa17.07■□□□□ 0.32
Stag1-206ENSMUST00000129269 Cgnl1Q6AW69 1298 aa17.06■□□□□ 0.32
Stag1-206ENSMUST00000129269 Frmpd1A2AKB4 1549 aa17.06■□□□□ 0.32
Stag1-206ENSMUST00000129269 Pde4bB1AWC9 736 aa17.06■□□□□ 0.32
Stag1-206ENSMUST00000129269 UvssaQ9D479 717 aa17.06■□□□□ 0.32
Stag1-206ENSMUST00000129269 Cabp2Q9JLK4 216 aa17.06■□□□□ 0.32
Stag1-206ENSMUST00000129269 Cplx2P84086 134 aa17.05■□□□□ 0.32
Stag1-206ENSMUST00000129269 Dnttip2Q8R2M2 758 aaKnown RBP17.05■□□□□ 0.32
Stag1-206ENSMUST00000129269 Wdr78E9PYY5 807 aa17.05■□□□□ 0.32
Stag1-206ENSMUST00000129269 Ccdc43Q9CR29 222 aaKnown RBP17.05■□□□□ 0.32
Stag1-206ENSMUST00000129269 PtmsQ9D0J8 101 aaKnown RBP17.05■□□□□ 0.32
Stag1-206ENSMUST00000129269 Rapgef4Q9EQZ6 1011 aa17.05■□□□□ 0.32
Stag1-206ENSMUST00000129269 4930572O03RikQ8C5Y0 211 aa17.04■□□□□ 0.32
Stag1-206ENSMUST00000129269 Odf2A3KGV1 830 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms