RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Rfx1P48377 963 aa18.98■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Jph4Q80WT0 628 aa18.98■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Top2aQ01320 1528 aaKnown RBP18.98■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Gripap1Q8VD04 806 aa18.98■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Prdm16A2A935 1275 aa18.97■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Evc2Q8K1G2 1220 aa18.97■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Tceal9Q9DD24 104 aa18.97■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Rnf20Q5DTM8 973 aa18.97■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 PnisrA2AJT4 805 aaKnown RBP18.96■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Tpm1P58771 284 aa18.96■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 A0A1L1SQF0 893 aa18.95■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Triml2E9PW10 424 aa18.95■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Ccdc183A2AJB1 534 aa18.94■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Mink1Q9JM52 1308 aa18.94■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Swt1Q9DBQ9 907 aa18.94■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Ddx11Q6AXC6 880 aa18.93■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Utp3Q9JI13 469 aaKnown RBP18.93■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Ggt6Q6PDE7 497 aa18.93■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Ift140E9PY46 1464 aa18.93■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Ccdc173A0JLY1 547 aa18.93■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Mcm2P97310 904 aa18.93■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Gm21969J3QJZ1 289 aa18.92■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 PhaxQ9JJT9 385 aaKnown RBP18.92■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Ric3Q8BPM6 367 aa18.92■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Ccdc171E9Q1U1 1324 aa18.91■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Gsto1O09131 240 aa18.91■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Ttll13A4Q9F6 804 aa18.91■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Naip1Q9QWK5 1403 aa18.9■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Hmgn5Q9JL35 406 aa18.9■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Usp16Q99LG0 825 aa18.9■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Tpm2P58774 284 aa18.9■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Ipo7Q9EPL8 1038 aaKnown RBP18.9■□□□□ 0.62
Pcdha9-201ENSMUST00000115659 Erc2Q6PH08 957 aa18.89■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Smc3Q9CW03 1217 aaKnown RBP18.89■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Soga1E1U8D0 1418 aa18.89■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 FanciQ8K368 1330 aa18.89■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 AppP12023 770 aa18.89■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Cchcr1Q8K2I2 770 aa18.89■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Iqgap2Q3UQ44 1575 aa18.88■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 KarsQ99MN1 595 aaKnown RBP18.88■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Q9D2X8 372 aa18.88■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Rbm25B2RY56 838 aaKnown RBP18.88■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Gsdma3Q5Y4Y6 464 aa18.88■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Cc2d1aQ8K1A6 943 aa18.88■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Kif3aP28741 701 aa18.87■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Taf3Q5HZG4 932 aa18.87■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Pank1Q8K4K6 548 aa18.87■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Pak3Q61036 559 aa18.87■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Pde4cQ3UEI1 686 aa18.87■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Tpm4Q6IRU2 248 aa18.87■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Bicd2Q921C5 820 aa18.87■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Phactr2B1AVP0 632 aa18.86■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Q8BT18 775 aa18.86■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Rab3gap2Q8BMG7 1366 aa18.86■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Ppp2r3aB2RXC8 1150 aa18.86■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 ScribQ80U72 1612 aa18.86■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 EzrP26040 586 aaKnown RBP18.86■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Chmp7Q8R1T1 451 aa18.86■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 SkilQ60665 675 aa18.85■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Slc4a2P13808 1237 aaKnown RBP18.85■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Puf60Q3UEB3 564 aaKnown RBP18.85■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Taok2Q6ZQ29 1240 aa18.85■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Gabpb2P81069 414 aa18.85■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 1700010I14RikQ7TPG0 532 aa18.84■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Ccdc34Q3UI66 367 aa18.84■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Hook1Q8BIL5 728 aa18.84■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 NrkQ9R0G8 1455 aa18.84■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Ncapd3Q6ZQK0 1506 aa18.84■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Plekhg5Q66T02 1073 aa18.84■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Myom3A2ABU4 1439 aa18.83■□□□□ 0.61
Pcdha9-201ENSMUST00000115659 Gm21190A0A0G2JGJ6 266 aa18.83■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Ppp2r1aQ76MZ3 589 aa18.83■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Cplx1P63040 134 aa18.82■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Fbxo2Q80UW2 297 aa18.82■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Rec8Q8C5S7 591 aa18.82■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Map3k1P53349 1493 aa18.82■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Pdcl3Q8BVF2 240 aa18.82■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Isy1Q69ZQ2 285 aaKnown RBP18.81■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Zfp444Q3TDV8 331 aaKnown RBP18.81■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Cyp46a1Q9WVK8 500 aa18.81■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Nek4Q9Z1J2 792 aa18.81■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Arhgef5E9Q7D5 1581 aa18.8■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Mical1Q8VDP3 1048 aa18.8■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Washc2Q6PGL7 1334 aa18.8■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Cavin4A2AMM0 362 aa18.8■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Ints3Q7TPD0 1041 aaKnown RBP18.8■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Gpatch3Q8BIY1 525 aa18.8■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Cd109Q8R422 1442 aa18.79■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Hoxa7P02830 229 aa18.78■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 NaspQ99MD9 773 aaKnown RBP18.78■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Sv2bQ8BG39 683 aa18.78■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Ubxn4Q8VCH8 506 aa18.78■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Zkscan2G3X952 960 aa18.78■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Krt82Q99M74 516 aa18.78■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Psma5Q9Z2U1 241 aaKnown RBP18.78■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Kri1Q8VDQ9 704 aaKnown RBP18.77■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Hmox1P14901 289 aa18.77■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Polr3gQ6NXY9 223 aa18.77■□□□□ 0.6
Pcdha9-201ENSMUST00000115659 Q7TT23 1179 aa18.77■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Q8C5K5 320 aa18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 115.2 ms