RNA–Protein interactions for RNA: ENSMUST00000113889.8

Gtf3c5-202, Transcript of General transcription factor 3C polypeptide 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Gtf3c5, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5-202ENSMUST00000113889 Atp10aO54827 1508 aa18.4■□□□□ 0.54
Gtf3c5-202ENSMUST00000113889 Abca8aQ8K442 1620 aa18.4■□□□□ 0.54
Gtf3c5-202ENSMUST00000113889 AatkQ80YE4 1365 aa18.4■□□□□ 0.54
Gtf3c5-202ENSMUST00000113889 Tmf1B9EKI3 1091 aa18.39■□□□□ 0.54
Gtf3c5-202ENSMUST00000113889 Plch2A2AP18 1501 aa18.39■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Fan1Q69ZT1 1020 aa18.39■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Pola1P33609 1465 aa18.39■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Anp32bQ9EST5 272 aaKnown RBP18.38■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Ttbk1Q6PCN3 1308 aa18.38■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 AglF8VPN4 1532 aa18.37■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Myo3aQ8K3H5 1613 aa18.37■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Sbno1Q689Z5 1390 aa18.36■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Zscan21Q07231 555 aa18.36■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Srpk2O54781 681 aaKnown RBP18.36■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Adgrb3Q80ZF8 1522 aa18.35■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Dip2cE9PWR4 1557 aa18.35■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Rims1Q99NE5 1463 aa18.35■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Cep152A2AUM9 1736 aaKnown RBP18.34■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 L3mbtl2P59178 703 aa18.34■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Usp40Q8BWR4 1235 aa18.34■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Cdc42bpgQ80UW5 1551 aa18.34■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Gm16486A0A1D5RMD1 1434 aa18.34■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Depdc5P61460 1591 aa18.34■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Clasp1Q80TV8 1535 aaKnown RBP18.33■□□□□ 0.53
Gtf3c5-202ENSMUST00000113889 Gtf2e1Q9D0D5 440 aa18.33■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 RereQ80TZ9 1558 aa18.32■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Fam184bQ0KK56 942 aa18.32■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Ehbp1l1Q99MS7 1716 aa18.31■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Nolc1E9Q5C9 702 aaKnown RBP18.31■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Anp32aO35381 247 aa18.31■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Trpm1Q2TV84 1622 aa18.31■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 AdgbG3UZ78 1657 aa18.3■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Itsn2Q9Z0R6 1659 aa18.3■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Yeats2Q3TUF7 1407 aa18.3■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Fam71e1A1L3C1 212 aa18.29■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Cdk5rap2Q8K389 1822 aa18.29■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Tex14Q7M6U3 1450 aa18.28■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Zfp444Q3TDV8 331 aaKnown RBP18.28■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Efcab6Q6P1E8 1516 aa18.28■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Mak16Q8BGS0 296 aaKnown RBP18.27■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Nphp4P59240 1425 aa18.27■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Puf60Q3UEB3 564 aaKnown RBP18.27■□□□□ 0.52
Gtf3c5-202ENSMUST00000113889 Adgrl3Q80TS3 1537 aa18.27■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Prdm2A2A7B5 1709 aaKnown RBP18.27■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 AU022751B1B0V2 589 aa18.26■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Ppp2r1aQ76MZ3 589 aa18.26■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Myom2Q14BI5 1463 aa18.26■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Zmym4A2A791 1549 aaKnown RBP18.26■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Rad21Q61550 635 aaKnown RBP18.26■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Tecpr2Q3UH45 1423 aa18.25■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Ino80Q6ZPV2 1559 aa18.25■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Ppp4r2Q0VGB7 417 aa18.24■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Erbb3Q61526 1339 aa18.24■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Kiaa0556Q8C753 1610 aa18.23■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Stard8Q8K031 1019 aa18.23■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Akap12Q9WTQ5 1684 aa18.23■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Esx1O88933 382 aa18.22■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Wdr43Q6ZQL4 677 aaKnown RBP18.22■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Rab3gap2Q8BMG7 1366 aa18.21■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Talpid3E9PV87 1520 aa18.21■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Cnga1P29974 684 aa18.21■□□□□ 0.51
Gtf3c5-202ENSMUST00000113889 Cul9Q80TT8 1865 aa18.21■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Prdm10Q3UTQ7 1184 aa18.2■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 DnmbpQ6TXD4 1580 aa18.2■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Kif7B7ZNG0 1348 aa18.2■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Ppp1r18Q8BQ30 594 aa18.19■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Kank1E9Q238 1360 aa18.19■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Kcnh8P59111 1102 aa18.18■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Dcaf11Q91VU6 549 aa18.18■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Arid4bA2CG63 1314 aaKnown RBP18.18■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Knl1Q66JQ7 1612 aa18.18■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Uggt1Q6P5E4 1551 aa18.18■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Kdm5aQ3UXZ9 1690 aa18.18■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Sipa1l1Q8C0T5 1782 aa18.18■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Cfap65Q3V0B4 1847 aa18.17■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Stag3O70576 1240 aa18.16■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Mroh1E0CZ22 1640 aa18.16■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 CrbnQ8C7D2 445 aa18.15■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Skint5A7XUY5 1461 aa18.14■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Lrrc7Q80TE7 1490 aa18.14■□□□□ 0.5
Gtf3c5-202ENSMUST00000113889 Plxnc1Q9QZC2 1574 aa18.14■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 PalldQ9ET54 1408 aa18.13■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Adamts7Q68SA9 1657 aa18.12■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Myom1Q62234 1667 aaKnown RBP18.11■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Synj2Q9D2G5 1434 aa18.1■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Kif16bB1AVY7 1312 aa18.1■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Slc4a3P16283 1227 aa18.1■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Ttc37F8VPK0 1563 aa18.1■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Atf7ipQ7TT18 1306 aa18.1■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Nlrp6Q91WS2 869 aa18.1■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Stk26Q99JT2 416 aa18.09■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Hecw2Q6I6G8 1578 aa18.08■□□□□ 0.49
Gtf3c5-202ENSMUST00000113889 Prrc2bQ7TPM1 1486 aaKnown RBP18.08■□□□□ 0.48
Gtf3c5-202ENSMUST00000113889 Supt16hQ920B9 1047 aa18.08■□□□□ 0.48
Gtf3c5-202ENSMUST00000113889 Atp1b4Q99ME6 356 aa18.08■□□□□ 0.48
Gtf3c5-202ENSMUST00000113889 Slc52a2Q9D8F3 450 aa18.08■□□□□ 0.48
Gtf3c5-202ENSMUST00000113889 Afap1Q80YS6 731 aa18.07■□□□□ 0.48
Gtf3c5-202ENSMUST00000113889 IqubQ8CDK3 788 aa18.07■□□□□ 0.48
Gtf3c5-202ENSMUST00000113889 Ahdc1Q6PAL7 1594 aaKnown RBP18.07■□□□□ 0.48
Gtf3c5-202ENSMUST00000113889 Gprasp1Q5U4C1 1347 aa18.06■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms