RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 CrebrfQ8CDG5 640 aaKnown RBP21.86■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Mcm2P97310 904 aa21.86■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Srek1Q8BZX4 494 aaKnown RBP21.86■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Ccdc47Q9D024 483 aaKnown RBP21.86■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Gnai1B2RSH2 354 aa21.85■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Gnai3Q9DC51 354 aa21.85■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Tiam1Q60610 1591 aa21.85■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Rfx1P48377 963 aa21.85■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Ccdc171E9Q1U1 1324 aa21.84■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Myom3A2ABU4 1439 aa21.84■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Ppp2r3aB2RXC8 1150 aa21.84■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Rab3gap2Q8BMG7 1366 aa21.84■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Tpm3P21107 285 aaKnown RBP21.83■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Sh3bgrQ9WUZ7 214 aa21.83■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Gpatch11Q3UFS4 262 aa21.83■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 HdgfP51859 237 aaKnown RBP21.83■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 MyclP10166 368 aa21.82■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Hmgn5Q9JL35 406 aa21.81■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 EzrP26040 586 aaKnown RBP21.81■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Tpm2P58774 284 aa21.8■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Jph4Q80WT0 628 aa21.79■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Pknox2Q8BG99 474 aa21.79■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 1700010I14RikQ7TPG0 532 aa21.79■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Swt1Q9DBQ9 907 aa21.79■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Zfp444Q3TDV8 331 aaKnown RBP21.79■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Slc4a10Q5DTL9 1118 aa21.79■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Rrp9Q91WM3 475 aaKnown RBP21.78■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Taok2Q6ZQ29 1240 aa21.78■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Taf3Q5HZG4 932 aa21.78■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Pibf1E9Q6K3 756 aa21.77■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Tpd52l1O54818 204 aa21.77■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 Rnf20Q5DTM8 973 aa21.77■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 KarsQ99MN1 595 aaKnown RBP21.77■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 A0A1L1SQF0 893 aa21.77■■□□□ 1.08
Col4a3bp-202ENSMUST00000109444 SkilQ60665 675 aa21.77■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Utp3Q9JI13 469 aaKnown RBP21.77■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Fbxo2Q80UW2 297 aa21.76■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Ppp2r1aQ76MZ3 589 aa21.76■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Ap3b2Q9JME5 1082 aa21.76■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Hoxa7P02830 229 aa21.76■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Kif3aP28741 701 aa21.76■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Phf14Q9D4H9 881 aa21.75■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Cchcr1Q8K2I2 770 aa21.75■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Pank1Q8K4K6 548 aa21.75■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Tpm1P58771 284 aa21.74■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Ddx11Q6AXC6 880 aa21.74■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Evc2Q8K1G2 1220 aa21.74■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Tceal9Q9DD24 104 aa21.74■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Il16O54824 1322 aa21.74■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Chmp3Q9CQ10 224 aa21.73■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Cplx2P84086 134 aa21.73■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Mroh2bQ7M6Y6 1581 aa21.73■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Triml2E9PW10 424 aa21.73■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Pak3Q61036 559 aa21.72■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Ric3Q8BPM6 367 aa21.72■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Rbm25B2RY56 838 aaKnown RBP21.72■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Shq1Q7TMX5 569 aa21.72■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 PhaxQ9JJT9 385 aaKnown RBP21.72■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Smc4Q8CG47 1286 aa21.71■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Smc3Q9CW03 1217 aaKnown RBP21.71■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 FanciQ8K368 1330 aa21.71■■□□□ 1.07
Col4a3bp-202ENSMUST00000109444 Sox12Q04890 314 aa21.7■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Pde4cQ3UEI1 686 aa21.7■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Cd109Q8R422 1442 aa21.7■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Gsto1O09131 240 aa21.7■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Ccdc34Q3UI66 367 aa21.69■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Erc2Q6PH08 957 aa21.69■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Usp16Q99LG0 825 aa21.68■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Grin2bQ01097 1482 aa21.68■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Q9D2X8 372 aa21.68■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Q7TT23 1179 aa21.67■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Mink1Q9JM52 1308 aa21.66■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Cavin4A2AMM0 362 aa21.65■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Puf60Q3UEB3 564 aaKnown RBP21.65■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Ints3Q7TPD0 1041 aaKnown RBP21.65■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Tnpo1Q8BFY9 898 aaKnown RBP21.65■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Duox2A2AQ99 1517 aa21.65■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Senp3Q9EP97 568 aaKnown RBP21.65■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Nek4Q9Z1J2 792 aa21.65■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Cabp4Q8VHC5 271 aa21.65■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Ecm2Q5FW85 670 aa21.65■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 AnlnQ8K298 1121 aaKnown RBP21.65■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 PrkcshO08795 521 aa21.64■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Bicd2Q921C5 820 aa21.64■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Soga1E1U8D0 1418 aa21.64■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Phactr2B1AVP0 632 aa21.64■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Ipo7Q9EPL8 1038 aaKnown RBP21.64■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Cyp46a1Q9WVK8 500 aa21.64■■□□□ 1.06
Col4a3bp-202ENSMUST00000109444 Gtf2a1Q99PM3 378 aa21.64■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 Hook1Q8BIL5 728 aa21.64■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 Zfp644E9QA22 1323 aa21.63■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 Gcc1Q9D4H2 778 aa21.63■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 AqrQ8CFQ3 1481 aaKnown RBP21.63■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 Gsdma3Q5Y4Y6 464 aa21.63■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 Zkscan1Q8BGS3 561 aaKnown RBP21.63■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 Top2bQ64511 1612 aa21.63■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 Zkscan2G3X952 960 aa21.62■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 Ubxn4Q8VCH8 506 aa21.62■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 NaspQ99MD9 773 aaKnown RBP21.62■■□□□ 1.05
Col4a3bp-202ENSMUST00000109444 Gm7298A0A0N4SVU1 1476 aa21.62■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms