RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Psme1P97371 249 aa11.48□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Fmr1nbQ80ZA7 238 aa11.48□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Fmn1Q05860 1466 aa11.48□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Arhgef12Q8R4H2 1543 aaKnown RBP11.47□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Neo1P97798 1493 aa11.47□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Map3k4O08648 1597 aa11.46□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Ccdc96Q9CR92 584 aa11.46□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Ppfia1B2RXQ2 1266 aa11.45□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Pxylp1Q8BHA9 480 aa11.45□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Abcc2Q8VI47 1543 aa11.45□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Abca16E9PWJ7 1678 aa11.44□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Evx2P49749 475 aa11.44□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Nob1Q8BW10 403 aa11.43□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Gm14025A2AP89 1413 aa11.43□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Brpf1B2RRD7 1212 aa11.42□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Klra4Q60651 263 aa11.42□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Hecw2Q6I6G8 1578 aa11.41□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Brwd3A2AHJ4 1799 aa11.41□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Ercc6l2Q9JIM3 1537 aa11.4□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Phox2bO35690 314 aa11.4□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Rem2Q8VEL9 341 aa11.4□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Pcdhgb4Q91XX6 912 aa11.4□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 SynmQ70IV5 1561 aa11.4□□□□□ -0.58
Ccdc47-202ENSMUST00000106865 Depdc5P61460 1591 aa11.39□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 Fndc1E9Q043 1732 aa11.38□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 Mfsd10Q9D2V8 456 aaKnown RBP11.38□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 Eif4g1Q6NZJ6 1600 aaKnown RBP11.37□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 TchhA0A0B4J1F9 1599 aa11.37□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 Col9a1Q05722 921 aa11.36□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 PxdnQ3UQ28 1475 aa11.36□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 Ttll13A4Q9F6 804 aa11.35□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 Prpmp5E9PXN1 296 aa11.35□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 Zfyve16Q80U44 1528 aa11.35□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 WizO88286 1684 aaKnown RBP11.34□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 Gm20503G3UZK1 150 aa11.34□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 EdaraddQ8VHX2 208 aa11.34□□□□□ -0.59
Ccdc47-202ENSMUST00000106865 Slx4Q6P1D7 1565 aa11.33□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Cyb5rlB1AS42 316 aa11.33□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Rgs9O54828 675 aa11.33□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 OplahQ8K010 1288 aa11.33□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Adamts12Q811B3 1600 aa11.33□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Acin1Q9JIX8 1338 aaKnown RBP11.33□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 NppbP40753 121 aa11.32□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Fkbp15Q6P9Q6 1216 aaKnown RBP11.32□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Lrrc9Q8CDN9 1456 aa11.32□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 NrkQ9R0G8 1455 aa11.32□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Cngb1E1AZ71 1325 aa11.31□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Pbx2O35984 430 aa11.3□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Scarf1Q5ND28 820 aa11.3□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Rhox13F6YCR7 232 aa11.29□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Fbxo41Q6NS60 873 aa11.29□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Kdm6bQ5NCY0 1641 aa11.28□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 ArxO35085 564 aa11.28□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Rbm46P86049 533 aa11.28□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 MarsQ68FL6 902 aaKnown RBP11.28□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Recql4Q75NR7 1216 aaKnown RBP11.28□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 Themis2Q91YX0 663 aa11.28□□□□□ -0.6
Ccdc47-202ENSMUST00000106865 AW822073A0A0N4SUK1 652 aa11.27□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Gm11939A2A592 99 aa11.27□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Arhgap27A2AB59 869 aa11.27□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 MetrnQ8C1Q4 291 aa11.27□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Kcnv2Q8CFS6 562 aa11.27□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Atf4Q06507 349 aa11.26□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Ano8Q6PB70 1060 aa11.26□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Rccd1Q8BTU7 377 aa11.26□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Znf354bQ9QXT9 601 aa11.26□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 SmapQ9R0P4 181 aaKnown RBP11.26□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 OatP29758 439 aa11.25□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 MlecQ6ZQI3 291 aaKnown RBP11.25□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Os9Q8K2C7 672 aa11.25□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Shroom4Q1W617 1475 aa11.25□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Znf608Q56A10 1511 aa11.25□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 TsksO54887 585 aa11.24□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Gpc1Q9QZF2 557 aa11.23□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Rnf17Q99MV7 1640 aa11.23□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 UbtfP25976 765 aaKnown RBP11.22□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Clcn1Q64347 994 aa11.22□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Dixdc1Q80Y83 711 aa11.22□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 AglF8VPN4 1532 aa11.21□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Trbv21A0A0A6YX06 97 aa11.21□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Arid3cA6PWV5 409 aa11.21□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Wdr44Q6NVE8 915 aa11.21□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Q9CQ90 155 aa11.21□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Ms4a4cQ9D3F6 226 aa11.21□□□□□ -0.61
Ccdc47-202ENSMUST00000106865 Hmx1O70218 332 aa11.2□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Cyp8b1O88962 500 aa11.2□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Ccdc102aQ3TMW1 549 aa11.2□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Speer3W4VSP1 261 aa11.2□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Abca5Q8K448 1642 aa11.2□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Dsg2O55111 1122 aa11.19□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Kdm5bQ80Y84 1544 aa11.19□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Smpd1Q04519 627 aa11.18□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Rad21Q61550 635 aaKnown RBP11.18□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Neurod2Q62414 383 aa11.18□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Emid1Q91VF5 444 aa11.18□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Wdr7Q920I9 1489 aa11.18□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Cul7Q8VE73 1689 aa11.17□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Rrbp1Q99PL5 1605 aaKnown RBP11.17□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Large2Q5XPT3 690 aa11.17□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Kcnc4Q8R1C0 628 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms