RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Ggt6Q6PDE7 497 aa19.01■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Cntnap1O54991 1385 aa19.01■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Gpr37l1Q99JG2 481 aa19■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Kank3Q9Z1P7 791 aa19■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Magi1Q6RHR9 1471 aa19■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Pik3c2aQ61194 1686 aa19■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 CltcQ68FD5 1675 aaKnown RBP19■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Zdbf2Q5SS00 2493 aaKnown RBP19■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Knl1Q66JQ7 1612 aa19■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Slc5a4bQ91ZP4 660 aa18.99■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 DroshaQ5HZJ0 1373 aaKnown RBP18.98■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 1700006A11RikB9EHI3 544 aa18.97■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Amigo3Q8C2S7 508 aa18.97■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Pcf11G3X9Z4 1553 aa18.97■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 RictorQ6QI06 1708 aa18.97■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Apba2P98084 750 aa18.96■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Cux1P53564 1515 aa18.95■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 Erich4Q3UNU4 136 aa18.95■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 Iqgap1Q9JKF1 1657 aaKnown RBP18.92■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 Trappc8E9PWG2 1437 aa18.91■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 Kcnn1Q9EQR3 537 aa18.91■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 Robo1O89026 1612 aa18.91■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 Fam208aQ69ZR9 1610 aaKnown RBP18.91■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 3425401B19RikD3Z1D3 1412 aa18.91■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 Trpm1Q2TV84 1622 aa18.9■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 Gimap5Q8BWF2 308 aa18.9■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 Col22a1E9Q7P1 1613 aa18.89■□□□□ 0.62
Hmgb1-202ENSMUST00000093196 Cacnb1Q8R3Z5 597 aa18.89■□□□□ 0.61
Hmgb1-202ENSMUST00000093196 MypopQ8R4U1 393 aa18.89■□□□□ 0.61
Hmgb1-202ENSMUST00000093196 Nrxn3Q6P9K9 1571 aa18.88■□□□□ 0.61
Hmgb1-202ENSMUST00000093196 Nwd1A6H603 1563 aa18.87■□□□□ 0.61
Hmgb1-202ENSMUST00000093196 Dhx30Q99PU8 1217 aaKnown RBP18.87■□□□□ 0.61
Hmgb1-202ENSMUST00000093196 Cfap74Q3UY96 1578 aa18.86■□□□□ 0.61
Hmgb1-202ENSMUST00000093196 Scaf1Q5U4C3 1256 aaKnown RBP18.84■□□□□ 0.61
Hmgb1-202ENSMUST00000093196 Med14A2ABV5 1459 aaKnown RBP18.84■□□□□ 0.61
Hmgb1-202ENSMUST00000093196 Lrp6O88572 1613 aa18.83■□□□□ 0.61
Hmgb1-202ENSMUST00000093196 Siglec1Q62230 1695 aa18.82■□□□□ 0.6
Hmgb1-202ENSMUST00000093196 Robo2Q7TPD3 1470 aa18.82■□□□□ 0.6
Hmgb1-202ENSMUST00000093196 Clcn6O35454 870 aa18.81■□□□□ 0.6
Hmgb1-202ENSMUST00000093196 Arhgap5P97393 1501 aa18.8■□□□□ 0.6
Hmgb1-202ENSMUST00000093196 Qtrt2B8ZXI1 415 aa18.8■□□□□ 0.6
Hmgb1-202ENSMUST00000093196 Znf579Q80VM4 562 aa18.79■□□□□ 0.6
Hmgb1-202ENSMUST00000093196 Pip4p2Q9CZX7 257 aa18.79■□□□□ 0.6
Hmgb1-202ENSMUST00000093196 Ndufv2Q9D6J6 248 aa18.76■□□□□ 0.59
Hmgb1-202ENSMUST00000093196 Dok7Q18PE0 504 aa18.75■□□□□ 0.59
Hmgb1-202ENSMUST00000093196 Brinp3Q499E0 766 aa18.75■□□□□ 0.59
Hmgb1-202ENSMUST00000093196 Cdc42bpgQ80UW5 1551 aa18.75■□□□□ 0.59
Hmgb1-202ENSMUST00000093196 Fyco1Q8VDC1 1437 aa18.74■□□□□ 0.59
Hmgb1-202ENSMUST00000093196 Tulp1Q9Z273 543 aa18.74■□□□□ 0.59
Hmgb1-202ENSMUST00000093196 Mbd5B1AYB6 1498 aa18.73■□□□□ 0.59
Hmgb1-202ENSMUST00000093196 Peg3Q3URU2 1571 aa18.71■□□□□ 0.59
Hmgb1-202ENSMUST00000093196 E9Q0B3 247 aa18.7■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Speer2E9Q9U2 264 aa18.7■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Yy1Q00899 414 aa18.7■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 E2f4Q8R0K9 410 aa18.7■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 TprnA2AI08 749 aaKnown RBP18.69■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Prr29B1ARI9 187 aa18.69■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 UbtfP25976 765 aaKnown RBP18.69■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 VirmaA2AIV2 1811 aaKnown RBP18.69■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Ttll13A4Q9F6 804 aa18.68■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Bclaf1Q8K019 919 aaKnown RBP18.68■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Kcna3P16390 528 aa18.66■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Bcl2l13P59017 434 aa18.66■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Nap1l5Q9JJF0 156 aa18.66■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Ncoa3O09000 1398 aa18.66■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Kif27Q7M6Z4 1394 aa18.66■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Ciz1Q8VEH2 845 aa18.65■□□□□ 0.58
Hmgb1-202ENSMUST00000093196 Arid4bA2CG63 1314 aaKnown RBP18.64■□□□□ 0.57
Hmgb1-202ENSMUST00000093196 Naip6Q9JIB6 1403 aa18.63■□□□□ 0.57
Hmgb1-202ENSMUST00000093196 Fam117aQ7TNF9 451 aa18.62■□□□□ 0.57
Hmgb1-202ENSMUST00000093196 Irx6Q9ER75 438 aa18.62■□□□□ 0.57
Hmgb1-202ENSMUST00000093196 Lmo7E9PYF4 1699 aaKnown RBP18.62■□□□□ 0.57
Hmgb1-202ENSMUST00000093196 Igf2rQ07113 2483 aaKnown RBP18.61■□□□□ 0.57
Hmgb1-202ENSMUST00000093196 Abcc6Q9R1S7 1498 aa18.61■□□□□ 0.57
Hmgb1-202ENSMUST00000093196 Ylpm1Q9R0I7 1386 aaKnown RBP18.61■□□□□ 0.57
Hmgb1-202ENSMUST00000093196 Gli2Q0VGT2 1544 aa18.6■□□□□ 0.57
Hmgb1-202ENSMUST00000093196 Arhgap35Q91YM2 1499 aa18.6■□□□□ 0.57
Hmgb1-202ENSMUST00000093196 Ddx11Q6AXC6 880 aa18.58■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Ccdc6D3YZP9 469 aa18.57■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Os9Q8K2C7 672 aa18.57■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Abcc3B2RX12 1523 aa18.56■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Pdzrn4E9PUZ9 1014 aa18.56■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Socs7Q8VHQ2 579 aa18.55■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Col18a1P39061 1774 aa18.54■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Cdc42bpaQ3UU96 1719 aa18.54■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Asxl1P59598 1514 aa18.54■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Znf518aB2RRF6 1478 aaKnown RBP18.53■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Tox2A2A472 547 aa18.53■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Fhod3Q76LL6 1578 aa18.52■□□□□ 0.56
Hmgb1-202ENSMUST00000093196 Ccnb3Q810T2 1396 aa18.52■□□□□ 0.55
Hmgb1-202ENSMUST00000093196 Pdcd11Q6NS46 1862 aaKnown RBP18.52■□□□□ 0.55
Hmgb1-202ENSMUST00000093196 Chd2E9PZM4 1827 aaKnown RBP18.51■□□□□ 0.55
Hmgb1-202ENSMUST00000093196 Kiaa1551Q5DTW7 1521 aa18.5■□□□□ 0.55
Hmgb1-202ENSMUST00000093196 Znf703P0CL69 594 aa18.5■□□□□ 0.55
Hmgb1-202ENSMUST00000093196 Aebp1Q640N1 1128 aa18.5■□□□□ 0.55
Hmgb1-202ENSMUST00000093196 Dhx57Q6P5D3 1388 aaKnown RBP18.48■□□□□ 0.55
Hmgb1-202ENSMUST00000093196 Clip1Q922J3 1391 aa18.48■□□□□ 0.55
Hmgb1-202ENSMUST00000093196 Pde8bE9Q4S1 865 aa18.48■□□□□ 0.55
Hmgb1-202ENSMUST00000093196 PrimpolQ6P1E7 537 aa18.48■□□□□ 0.55
Hmgb1-202ENSMUST00000093196 Znf526Q8BI66 675 aa18.48■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms