RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Usp16Q99LG0 825 aa18.57■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Ipo7Q9EPL8 1038 aaKnown RBP18.57■□□□□ 0.56
Atg4d-201ENSMUST00000065005 A0A1L1SQF0 893 aa18.57■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Utp3Q9JI13 469 aaKnown RBP18.57■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Ddrgk1Q80WW9 315 aa18.57■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Gsdma3Q5Y4Y6 464 aa18.56■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Rfx1P48377 963 aa18.56■□□□□ 0.56
Atg4d-201ENSMUST00000065005 WrnO09053 1401 aa18.56■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Wdr78E9PYY5 807 aa18.56■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Zpr1Q62384 459 aa18.56■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Sirt1Q923E4 737 aa18.56■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Ttll5Q8CHB8 1328 aa18.56■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Rnf20Q5DTM8 973 aa18.55■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Atf3Q60765 181 aa18.55■□□□□ 0.56
Atg4d-201ENSMUST00000065005 ErbinQ80TH2 1402 aa18.55■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Bcl2l13P59017 434 aa18.55■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Bicd2Q921C5 820 aa18.55■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Ric3Q8BPM6 367 aa18.55■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Phactr2B1AVP0 632 aa18.54■□□□□ 0.56
Atg4d-201ENSMUST00000065005 VgfQ0VGU4 617 aa18.54■□□□□ 0.56
Atg4d-201ENSMUST00000065005 NexnQ7TPW1 607 aa18.54■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Soga1E1U8D0 1418 aa18.54■□□□□ 0.56
Atg4d-201ENSMUST00000065005 March6Q6ZQ89 909 aa18.54■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Chmp4cQ9D7F7 232 aa18.54■□□□□ 0.56
Atg4d-201ENSMUST00000065005 PhaxQ9JJT9 385 aaKnown RBP18.53■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Cc2d2bA0A286YDU8 1405 aa18.53■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Rapgef2Q8CHG7 1496 aa18.52■□□□□ 0.56
Atg4d-201ENSMUST00000065005 Hmox1P14901 289 aa18.52■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Gsto1O09131 240 aa18.52■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Esx1O88933 382 aa18.52■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Smg6P61406 1418 aaKnown RBP18.51■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Ralbp1Q62172 648 aa18.51■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Sytl4Q9R0Q1 673 aa18.51■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Map7d2A2AG50 781 aa18.5■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Zscan10Q3URR7 782 aa18.5■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Cfdp1O88271 295 aaKnown RBP18.5■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Hook1Q8BIL5 728 aa18.49■□□□□ 0.55
Atg4d-201ENSMUST00000065005 UvssaQ9D479 717 aa18.49■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Nolc1E9Q5C9 702 aaKnown RBP18.48■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Sf3b2Q3UJB0 878 aaKnown RBP18.48■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Glipr1l2Q9CQ35 332 aa18.48■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Smc3Q9CW03 1217 aaKnown RBP18.48■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Samd1D3YXK1 519 aa18.48■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Hdgfl1Q2VPR5 283 aa18.48■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Erc2Q6PH08 957 aa18.48■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Gm10471E9Q1C7 252 aa18.47■□□□□ 0.55
Atg4d-201ENSMUST00000065005 TatQ8QZR1 454 aa18.47■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Ush1cQ9ES64 910 aa18.47■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Gnai1B2RSH2 354 aa18.47■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Gnai3Q9DC51 354 aa18.47■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Nectin2P32507 530 aa18.47■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Dapk1Q80YE7 1442 aa18.46■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Ncoa2Q61026 1462 aa18.46■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Hnrnpul1Q8VDM6 859 aaKnown RBP18.46■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Q9D2X8 372 aa18.46■□□□□ 0.55
Atg4d-201ENSMUST00000065005 Me1P06801 572 aa18.45■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Trim58Q5NCC9 485 aa18.45■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Rbm5Q91YE7 815 aaKnown RBP18.45■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Tdrd9Q14BI7 1383 aa18.45■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Gtf2f1Q3THK3 508 aaKnown RBP18.45■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Taok2Q6ZQ29 1240 aa18.45■□□□□ 0.54
Atg4d-201ENSMUST00000065005 LrpprcQ6PB66 1392 aaKnown RBP18.45■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Abl1P00520 1123 aa18.45■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Mphosph10Q810V0 681 aaKnown RBP18.45■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Klf15Q9EPW2 415 aa18.44■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Fnbp4Q6ZQ03 1031 aa18.44■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Sv2bQ8BG39 683 aa18.44■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Kif4P33174 1231 aa18.44■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Gpatch3Q8BIY1 525 aa18.44■□□□□ 0.54
Atg4d-201ENSMUST00000065005 4933402E13RikQ9D4D2 429 aa18.43■□□□□ 0.54
Atg4d-201ENSMUST00000065005 CftrP26361 1476 aa18.43■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Nutm1Q8BHP2 1126 aa18.43■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Mad1l1Q9WTX8 717 aaKnown RBP18.43■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Rbm25B2RY56 838 aaKnown RBP18.43■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Ak7Q9D2H2 614 aa18.43■□□□□ 0.54
Atg4d-201ENSMUST00000065005 A0A0U1RNP2 1173 aa18.43■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Swt1Q9DBQ9 907 aa18.43■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Jph4Q80WT0 628 aa18.42■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Trim29Q8R2Q0 587 aa18.42■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Gripap1Q8VD04 806 aa18.42■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Ppp4r3bQ922R5 820 aa18.42■□□□□ 0.54
Atg4d-201ENSMUST00000065005 PnisrA2AJT4 805 aaKnown RBP18.41■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Ccdc34Q3UI66 367 aa18.41■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Q9D9H8 365 aa18.41■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Smg7Q5RJH6 1138 aaKnown RBP18.41■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Gnl3lQ6PGG6 577 aaKnown RBP18.41■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Sycp2Q9CUU3 1500 aa18.4■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Stk3Q9JI10 497 aa18.4■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Dhx29Q6PGC1 1365 aaKnown RBP18.4■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Zranb3Q6NZP1 1069 aa18.4■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Znf704Q9ERQ3 566 aa18.4■□□□□ 0.54
Atg4d-201ENSMUST00000065005 Mre11Q61216 706 aa18.39■□□□□ 0.53
Atg4d-201ENSMUST00000065005 Kif16bB1AVY7 1312 aa18.39■□□□□ 0.53
Atg4d-201ENSMUST00000065005 Sycp1Q62209 993 aa18.39■□□□□ 0.53
Atg4d-201ENSMUST00000065005 Atp2b2Q9R0K7 1198 aa18.38■□□□□ 0.53
Atg4d-201ENSMUST00000065005 Evi5lH3BKQ3 813 aa18.37■□□□□ 0.53
Atg4d-201ENSMUST00000065005 Ccdc30Q8BVF4 654 aa18.37■□□□□ 0.53
Atg4d-201ENSMUST00000065005 Cyp46a1Q9WVK8 500 aa18.37■□□□□ 0.53
Atg4d-201ENSMUST00000065005 Cfap99A0A140LIX9 648 aa18.37■□□□□ 0.53
Atg4d-201ENSMUST00000065005 Puf60Q3UEB3 564 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms