RNA–Protein interactions for RNA: ENSMUST00000040924.7

Ss18-201, Transcript of Protein SSXT, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ss18, Length 3,090 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18-201ENSMUST00000040924 Pabpn1Q8CCS6 302 aaKnown RBP18.71■□□□□ 0.59
Ss18-201ENSMUST00000040924 Spryd3E9Q9B3 442 aa18.7■□□□□ 0.58
Ss18-201ENSMUST00000040924 Dnai1Q8C0M8 701 aa18.7■□□□□ 0.58
Ss18-201ENSMUST00000040924 Mbd5B1AYB6 1498 aa18.7■□□□□ 0.58
Ss18-201ENSMUST00000040924 PtprgQ05909 1442 aa18.7■□□□□ 0.58
Ss18-201ENSMUST00000040924 B4galnt3Q6L8S8 986 aa18.7■□□□□ 0.58
Ss18-201ENSMUST00000040924 Gapvd1Q6PAR5 1458 aa18.69■□□□□ 0.58
Ss18-201ENSMUST00000040924 Ttll13A4Q9F6 804 aa18.68■□□□□ 0.58
Ss18-201ENSMUST00000040924 Slc4a1apE9PX68 744 aa18.68■□□□□ 0.58
Ss18-201ENSMUST00000040924 Naip6Q9JIB6 1403 aa18.68■□□□□ 0.58
Ss18-201ENSMUST00000040924 Pdlim2Q8R1G6 349 aa18.68■□□□□ 0.58
Ss18-201ENSMUST00000040924 PnisrA2AJT4 805 aaKnown RBP18.67■□□□□ 0.58
Ss18-201ENSMUST00000040924 Paxip1Q6NZQ4 1056 aa18.67■□□□□ 0.58
Ss18-201ENSMUST00000040924 Rock2P70336 1388 aa18.67■□□□□ 0.58
Ss18-201ENSMUST00000040924 Gm20521D3Z5F7 333 aa18.66■□□□□ 0.58
Ss18-201ENSMUST00000040924 Adgrl2Q8JZZ7 1487 aa18.66■□□□□ 0.58
Ss18-201ENSMUST00000040924 Rnf17Q99MV7 1640 aa18.65■□□□□ 0.58
Ss18-201ENSMUST00000040924 Atp1b4Q99ME6 356 aa18.65■□□□□ 0.58
Ss18-201ENSMUST00000040924 Usp54Q8BL06 1588 aaKnown RBP18.64■□□□□ 0.57
Ss18-201ENSMUST00000040924 TimelessQ9R1X4 1197 aa18.64■□□□□ 0.57
Ss18-201ENSMUST00000040924 Kidins220E9Q9B7 1793 aa18.64■□□□□ 0.57
Ss18-201ENSMUST00000040924 RalgapbQ8BQZ4 1484 aa18.63■□□□□ 0.57
Ss18-201ENSMUST00000040924 Stard8Q8K031 1019 aa18.63■□□□□ 0.57
Ss18-201ENSMUST00000040924 Ptch1Q61115 1434 aa18.62■□□□□ 0.57
Ss18-201ENSMUST00000040924 Gm156Q58A37 223 aa18.62■□□□□ 0.57
Ss18-201ENSMUST00000040924 Abca8bQ8K440 1620 aa18.62■□□□□ 0.57
Ss18-201ENSMUST00000040924 Zranb1Q7M760 708 aa18.61■□□□□ 0.57
Ss18-201ENSMUST00000040924 Polr3aB2RXC6 1390 aa18.61■□□□□ 0.57
Ss18-201ENSMUST00000040924 Edc4Q3UJB9 1406 aaKnown RBP18.61■□□□□ 0.57
Ss18-201ENSMUST00000040924 Prdm16A2A935 1275 aa18.61■□□□□ 0.57
Ss18-201ENSMUST00000040924 Plekhg5Q66T02 1073 aa18.61■□□□□ 0.57
Ss18-201ENSMUST00000040924 Srcin1Q9QWI6 1250 aa18.61■□□□□ 0.57
Ss18-201ENSMUST00000040924 Dusp27Q148W8 1138 aa18.6■□□□□ 0.57
Ss18-201ENSMUST00000040924 Dbr1Q923B1 550 aa18.6■□□□□ 0.57
Ss18-201ENSMUST00000040924 Phf14Q9D4H9 881 aa18.6■□□□□ 0.57
Ss18-201ENSMUST00000040924 Ppp1r18Q8BQ30 594 aa18.59■□□□□ 0.57
Ss18-201ENSMUST00000040924 PrxO55103 1391 aa18.59■□□□□ 0.57
Ss18-201ENSMUST00000040924 Abcc3B2RX12 1523 aa18.58■□□□□ 0.57
Ss18-201ENSMUST00000040924 Stk26Q99JT2 416 aa18.58■□□□□ 0.56
Ss18-201ENSMUST00000040924 Ttc21bQ0HA38 1315 aa18.57■□□□□ 0.56
Ss18-201ENSMUST00000040924 Srpk2O54781 681 aaKnown RBP18.56■□□□□ 0.56
Ss18-201ENSMUST00000040924 Esx1O88933 382 aa18.56■□□□□ 0.56
Ss18-201ENSMUST00000040924 Irf5P56477 497 aa18.56■□□□□ 0.56
Ss18-201ENSMUST00000040924 Igf1rQ60751 1373 aa18.56■□□□□ 0.56
Ss18-201ENSMUST00000040924 Adamts13Q769J6 1426 aa18.55■□□□□ 0.56
Ss18-201ENSMUST00000040924 Xrn1P97789 1719 aaKnown RBP18.55■□□□□ 0.56
Ss18-201ENSMUST00000040924 ArxO35085 564 aa18.55■□□□□ 0.56
Ss18-201ENSMUST00000040924 Usp40Q8BWR4 1235 aa18.55■□□□□ 0.56
Ss18-201ENSMUST00000040924 ShprhQ7TPQ3 1674 aa18.55■□□□□ 0.56
Ss18-201ENSMUST00000040924 Zfyve16Q80U44 1528 aa18.54■□□□□ 0.56
Ss18-201ENSMUST00000040924 Pdcd11Q6NS46 1862 aaKnown RBP18.53■□□□□ 0.56
Ss18-201ENSMUST00000040924 Cfap74Q3UY96 1578 aa18.53■□□□□ 0.56
Ss18-201ENSMUST00000040924 CrbnQ8C7D2 445 aa18.53■□□□□ 0.56
Ss18-201ENSMUST00000040924 Kif1bQ60575 1816 aaKnown RBP18.52■□□□□ 0.56
Ss18-201ENSMUST00000040924 Ppm1gQ61074 542 aa18.52■□□□□ 0.56
Ss18-201ENSMUST00000040924 Prkrip1Q9CWV6 186 aaKnown RBP18.52■□□□□ 0.56
Ss18-201ENSMUST00000040924 Erbb3Q61526 1339 aa18.52■□□□□ 0.56
Ss18-201ENSMUST00000040924 Col17a1Q07563 1470 aa18.52■□□□□ 0.56
Ss18-201ENSMUST00000040924 Mast1Q9R1L5 1570 aa18.52■□□□□ 0.56
Ss18-201ENSMUST00000040924 Anp32bQ9EST5 272 aaKnown RBP18.52■□□□□ 0.55
Ss18-201ENSMUST00000040924 Apbb1Q9QXJ1 710 aa18.52■□□□□ 0.55
Ss18-201ENSMUST00000040924 NudcO35685 332 aaKnown RBP18.51■□□□□ 0.55
Ss18-201ENSMUST00000040924 Cpsf1Q9EPU4 1441 aaKnown RBP18.51■□□□□ 0.55
Ss18-201ENSMUST00000040924 Kif20aP97329 887 aa18.51■□□□□ 0.55
Ss18-201ENSMUST00000040924 Zscan10Q3URR7 782 aa18.51■□□□□ 0.55
Ss18-201ENSMUST00000040924 Rock1P70335 1354 aa18.51■□□□□ 0.55
Ss18-201ENSMUST00000040924 Abca9Q8K449 1623 aa18.51■□□□□ 0.55
Ss18-201ENSMUST00000040924 Eif2s2Q99L45 331 aaKnown RBP18.5■□□□□ 0.55
Ss18-201ENSMUST00000040924 Iqgap1Q9JKF1 1657 aaKnown RBP18.5■□□□□ 0.55
Ss18-201ENSMUST00000040924 Tulp4Q9JIL5 1547 aa18.49■□□□□ 0.55
Ss18-201ENSMUST00000040924 PogkQ80TC5 607 aa18.49■□□□□ 0.55
Ss18-201ENSMUST00000040924 Neurod2Q62414 383 aa18.48■□□□□ 0.55
Ss18-201ENSMUST00000040924 Tex2Q6ZPJ0 1128 aaKnown RBP18.48■□□□□ 0.55
Ss18-201ENSMUST00000040924 Dcaf11Q91VU6 549 aa18.48■□□□□ 0.55
Ss18-201ENSMUST00000040924 ErbinQ80TH2 1402 aa18.48■□□□□ 0.55
Ss18-201ENSMUST00000040924 Cep170Q6A065 1588 aa18.47■□□□□ 0.55
Ss18-201ENSMUST00000040924 Gtf2e1Q9D0D5 440 aa18.47■□□□□ 0.55
Ss18-201ENSMUST00000040924 Abcc6Q9R1S7 1498 aa18.47■□□□□ 0.55
Ss18-201ENSMUST00000040924 Rrp12Q6P5B0 1295 aaKnown RBP18.46■□□□□ 0.55
Ss18-201ENSMUST00000040924 Nsd2Q8BVE8 1365 aa18.46■□□□□ 0.55
Ss18-201ENSMUST00000040924 Dhx30Q99PU8 1217 aaKnown RBP18.46■□□□□ 0.55
Ss18-201ENSMUST00000040924 Zfp444Q3TDV8 331 aaKnown RBP18.46■□□□□ 0.54
Ss18-201ENSMUST00000040924 Abca6Q8K441 1624 aa18.45■□□□□ 0.54
Ss18-201ENSMUST00000040924 EspnQ9ET47 871 aa18.45■□□□□ 0.54
Ss18-201ENSMUST00000040924 Depdc5P61460 1591 aa18.44■□□□□ 0.54
Ss18-201ENSMUST00000040924 Stag3O70576 1240 aa18.44■□□□□ 0.54
Ss18-201ENSMUST00000040924 Zscan21Q07231 555 aa18.44■□□□□ 0.54
Ss18-201ENSMUST00000040924 Dnajc5gQ8C632 165 aa18.44■□□□□ 0.54
Ss18-201ENSMUST00000040924 Rangap1P46061 589 aaKnown RBP18.43■□□□□ 0.54
Ss18-201ENSMUST00000040924 Puf60Q3UEB3 564 aaKnown RBP18.43■□□□□ 0.54
Ss18-201ENSMUST00000040924 Yeats2Q3TUF7 1407 aa18.43■□□□□ 0.54
Ss18-201ENSMUST00000040924 Tmf1B9EKI3 1091 aa18.43■□□□□ 0.54
Ss18-201ENSMUST00000040924 Nom1Q3UFM5 854 aaKnown RBP18.43■□□□□ 0.54
Ss18-201ENSMUST00000040924 Trim26Q99PN3 545 aa18.43■□□□□ 0.54
Ss18-201ENSMUST00000040924 Fam184bQ0KK56 942 aa18.41■□□□□ 0.54
Ss18-201ENSMUST00000040924 Afap1Q80YS6 731 aa18.41■□□□□ 0.54
Ss18-201ENSMUST00000040924 Fam43aQ8BUP8 424 aa18.41■□□□□ 0.54
Ss18-201ENSMUST00000040924 AatkQ80YE4 1365 aa18.41■□□□□ 0.54
Ss18-201ENSMUST00000040924 Nlrp6Q91WS2 869 aa18.4■□□□□ 0.54
Ss18-201ENSMUST00000040924 Mink1Q9JM52 1308 aa18.4■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms