RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Znf428Q8C1M2 176 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Iqgap2Q3UQ44 1575 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Fkbp4P30416 458 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Stk3Q9JI10 497 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 ErbinQ80TH2 1402 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Cald1E9QA15 768 aaKnown RBP10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Ncbp3Q8BZR9 615 aaKnown RBP10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Cc2d2aQ8CFW7 1633 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Hmox1P14901 289 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Cabp2Q9JLK4 216 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Vps53Q8CCB4 832 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 BccipQ9CWI3 316 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Map7d2A2AG50 781 aa10.85□□□□□ -0.67
Ttc28-201ENSMUST00000040111 RdxP26043 583 aaKnown RBP10.85□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Sf3b2Q3UJB0 878 aaKnown RBP10.84□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Atf3Q60765 181 aa10.84□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Smarca2Q6DIC0 1577 aa10.84□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Dhx16G3X8X0 1044 aaKnown RBP10.84□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Babam1Q3UI43 333 aa10.84□□□□□ -0.67
Ttc28-201ENSMUST00000040111 HnrnpmQ9D0E1 729 aaKnown RBP10.84□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Abl1P00520 1123 aa10.84□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Chmp7Q8R1T1 451 aa10.84□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Strn4P58404 760 aa10.83□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Rbm5Q91YE7 815 aaKnown RBP10.83□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Trim30aP15533 496 aa10.83□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Ipo8Q7TMY7 1010 aa10.83□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Ggnbp2Q5SV77 696 aa10.83□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Ric3Q8BPM6 367 aa10.83□□□□□ -0.68
Ttc28-201ENSMUST00000040111 HdgfP51859 237 aaKnown RBP10.83□□□□□ -0.68
Ttc28-201ENSMUST00000040111 TatQ8QZR1 454 aa10.82□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Zranb1Q7M760 708 aa10.82□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Mphosph10Q810V0 681 aaKnown RBP10.82□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Ccdc96Q9CR92 584 aa10.82□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Cdca7Q9D0M2 382 aa10.82□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Aplp1Q03157 653 aa10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Tpm3-rs7D3Z2H9 248 aa10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Ccdc30Q8BVF4 654 aa10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Sirt1Q923E4 737 aa10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Gm21698A0A087WQP8 267 aa10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Phactr2B1AVP0 632 aa10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Gm21671G3UY31 267 aa10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Cfdp1O88271 295 aaKnown RBP10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Eva1cP58659 440 aa10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Gsto1O09131 240 aa10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Hdgfl1Q2VPR5 283 aa10.81□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Arhgap31A6X8Z5 1425 aa10.8□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Bicdl1A0JNT9 577 aa10.8□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Cdk19Q8BWD8 501 aa10.8□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Fbxo2Q80UW2 297 aa10.79□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Smg6P61406 1418 aaKnown RBP10.79□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Arhgap5P97393 1501 aa10.79□□□□□ -0.68
Ttc28-201ENSMUST00000040111 PtprkP35822 1457 aa10.79□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Rock1P70335 1354 aa10.79□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Map3k13Q1HKZ5 959 aa10.79□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Eif4g2Q62448 906 aaKnown RBP10.79□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Q8C5K5 320 aa10.79□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Rbm25B2RY56 838 aaKnown RBP10.79□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Tceal9Q9DD24 104 aa10.78□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Cnnm1Q0GA42 951 aa10.78□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Cyb5rlB1AS42 316 aa10.78□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Zpr1Q62384 459 aa10.78□□□□□ -0.68
Ttc28-201ENSMUST00000040111 VgfQ0VGU4 617 aa10.78□□□□□ -0.68
Ttc28-201ENSMUST00000040111 GnpatP98192 678 aa10.78□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Becn1O88597 448 aa10.78□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Fam50bQ9WTJ8 334 aa10.78□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Q9D2X8 372 aa10.77□□□□□ -0.68
Ttc28-201ENSMUST00000040111 Ak7Q9D2H2 614 aa10.77□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Gigyf1Q99MR1 1044 aaKnown RBP10.77□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Plcd4Q8K3R3 807 aa10.76□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Arid4aF8VPQ2 1261 aaKnown RBP10.76□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Ylpm1Q9R0I7 1386 aaKnown RBP10.76□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Ppp2r1aQ76MZ3 589 aa10.76□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Duox2A2AQ99 1517 aa10.76□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Ccer1Q9CQL2 403 aa10.76□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Kif16bB1AVY7 1312 aa10.75□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Mcm10Q0VBD2 885 aa10.74□□□□□ -0.69
Ttc28-201ENSMUST00000040111 MycnP03966 462 aaKnown RBP10.74□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Dennd6aQ8BH65 605 aa10.74□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Ell2Q3UKU1 639 aa10.74□□□□□ -0.69
Ttc28-201ENSMUST00000040111 PalmQ9Z0P4 383 aa10.74□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Slc4a2P13808 1237 aaKnown RBP10.73□□□□□ -0.69
Ttc28-201ENSMUST00000040111 KarsQ99MN1 595 aaKnown RBP10.73□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Speer4bQ9D9F7 267 aa10.73□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Ddrgk1Q80WW9 315 aa10.73□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Cd109Q8R422 1442 aa10.73□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Plb1Q3TTY0 1478 aa10.73□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Cttnbp2B9EJA2 1648 aa10.73□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Ftsj3Q9DBE9 838 aaKnown RBP10.73□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Dmrt2Q8BG36 561 aa10.73□□□□□ -0.69
Ttc28-201ENSMUST00000040111 UacaQ8CGB3 1411 aa10.72□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Tpd52l1O54818 204 aa10.72□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Arap1Q4LDD4 1452 aa10.72□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Gm7298A0A0N4SVU1 1476 aa10.72□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Ccp110Q7TSH4 1004 aa10.72□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Fam193aQ8CGI1 1231 aaKnown RBP10.72□□□□□ -0.69
Ttc28-201ENSMUST00000040111 A0A0U1RNP2 1173 aa10.72□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Zfp444Q3TDV8 331 aaKnown RBP10.72□□□□□ -0.69
Ttc28-201ENSMUST00000040111 4933402E13RikQ9D4D2 429 aa10.72□□□□□ -0.69
Ttc28-201ENSMUST00000040111 R3hcc1Q8BSI6 488 aa10.71□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Ush1cQ9ES64 910 aa10.71□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 121.7 ms