RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Q7TT23 1179 aa17.09■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Prex1Q69ZK0 1650 aa17.09■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Arid4bA2CG63 1314 aaKnown RBP17.09■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Lemd3Q9WU40 921 aa17.09■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Srcin1Q9QWI6 1250 aa17.08■□□□□ 0.33
Rnf4-201ENSMUST00000030992 Tmf1B9EKI3 1091 aa17.08■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Ppp4r2Q0VGB7 417 aa17.08■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Rims1Q99NE5 1463 aa17.07■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Mak16Q8BGS0 296 aaKnown RBP17.07■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Erbb3Q61526 1339 aa17.06■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Depdc5P61460 1591 aa17.06■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Adgrb3Q80ZF8 1522 aa17.05■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Erich6D3Z6S9 713 aa17.05■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Zfp444Q3TDV8 331 aaKnown RBP17.05■□□□□ 0.32
Rnf4-201ENSMUST00000030992 ErbinQ80TH2 1402 aa17.05■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Ehbp1l1Q99MS7 1716 aa17.05■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Supt16hQ920B9 1047 aa17.04■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Cdk5rap2Q8K389 1822 aa17.04■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Arid3cA6PWV5 409 aa17.04■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Atp10aO54827 1508 aa17.04■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Prdm2A2A7B5 1709 aaKnown RBP17.04■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Myo3aQ8K3H5 1613 aa17.03■□□□□ 0.32
Rnf4-201ENSMUST00000030992 OvosQ3UU35 1456 aa17.02■□□□□ 0.32
Rnf4-201ENSMUST00000030992 Kdm2aP59997 1161 aa17.02■□□□□ 0.32
Rnf4-201ENSMUST00000030992 AatkQ80YE4 1365 aa17.02■□□□□ 0.32
Rnf4-201ENSMUST00000030992 AglF8VPN4 1532 aa17.02■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Mink1Q9JM52 1308 aa17.02■□□□□ 0.31
Rnf4-201ENSMUST00000030992 DnmbpQ6TXD4 1580 aa17.01■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Clasp1Q80TV8 1535 aaKnown RBP17.01■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Akap12Q9WTQ5 1684 aa17.01■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Col17a1Q07563 1470 aa17.01■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Myom2Q14BI5 1463 aa17.01■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Slc4a1apE9PX68 744 aa17■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Nphp4P59240 1425 aa17■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Tecpr2Q3UH45 1423 aa17■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Sipa1l1Q8C0T5 1782 aa17■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Efcab6Q6P1E8 1516 aa17■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Fam184bQ0KK56 942 aa17■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Cdc42bpgQ80UW5 1551 aa17■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Stard8Q8K031 1019 aa16.98■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Kdm5aQ3UXZ9 1690 aa16.98■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Gli2Q0VGT2 1544 aa16.98■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Ppp2r1aQ76MZ3 589 aa16.98■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Atf7ipQ7TT18 1306 aa16.98■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Rab3gap2Q8BMG7 1366 aa16.97■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Ino80Q6ZPV2 1559 aa16.97■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Gm20521D3Z5F7 333 aa16.97■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Liat1Q810M6 228 aa16.97■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Pelp1Q9DBD5 1123 aaKnown RBP16.96■□□□□ 0.31
Rnf4-201ENSMUST00000030992 Ttc41Q692V3 1318 aa16.95■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Upf2A2AT37 1269 aaKnown RBP16.95■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Stk24Q99KH8 431 aa16.95■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Uggt1Q6P5E4 1551 aa16.95■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Talpid3E9PV87 1520 aa16.94■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Gtf2e1Q9D0D5 440 aa16.94■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Ptch1Q61115 1434 aa16.94■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Kiaa0556Q8C753 1610 aa16.94■□□□□ 0.3
Rnf4-201ENSMUST00000030992 AdgbG3UZ78 1657 aa16.93■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Kcnh8P59111 1102 aa16.93■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Myom1Q62234 1667 aaKnown RBP16.93■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Usp40Q8BWR4 1235 aa16.92■□□□□ 0.3
Rnf4-201ENSMUST00000030992 RereQ80TZ9 1558 aa16.92■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Srpk2O54781 681 aaKnown RBP16.91■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Dip2cE9PWR4 1557 aa16.91■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Fan1Q69ZT1 1020 aa16.91■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Plxnc1Q9QZC2 1574 aa16.9■□□□□ 0.3
Rnf4-201ENSMUST00000030992 Esx1O88933 382 aa16.9■□□□□ 0.3
Rnf4-201ENSMUST00000030992 TnikP83510 1323 aa16.89■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Gprasp1Q5U4C1 1347 aa16.89■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Os9Q8K2C7 672 aa16.88■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Ift172Q6VH22 1749 aa16.88■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Ak9G3UYQ4 1894 aa16.88■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Kif16bB1AVY7 1312 aa16.88■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Rtl5Q5DTT4 599 aa16.87■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Pabpn1Q8CCS6 302 aaKnown RBP16.87■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Mroh1E0CZ22 1640 aa16.86■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Rad21Q61550 635 aaKnown RBP16.86■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Kif7B7ZNG0 1348 aa16.86■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Puf60Q3UEB3 564 aaKnown RBP16.85■□□□□ 0.29
Rnf4-201ENSMUST00000030992 MaddQ80U28 1577 aa16.85■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Adamts7Q68SA9 1657 aa16.85■□□□□ 0.29
Rnf4-201ENSMUST00000030992 AU022751B1B0V2 589 aa16.85■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Tcerg1Q8CGF7 1100 aaKnown RBP16.85■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Prkrip1Q9CWV6 186 aaKnown RBP16.85■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Pak3Q61036 559 aa16.84■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Egfem1Q8C088 590 aa16.84■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Slc4a3P16283 1227 aa16.83■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Cul9Q80TT8 1865 aa16.83■□□□□ 0.29
Rnf4-201ENSMUST00000030992 Usp19Q3UJD6 1360 aa16.83■□□□□ 0.28
Rnf4-201ENSMUST00000030992 PalldQ9ET54 1408 aa16.82■□□□□ 0.28
Rnf4-201ENSMUST00000030992 Knl1Q66JQ7 1612 aa16.82■□□□□ 0.28
Rnf4-201ENSMUST00000030992 KdrP35918 1367 aa16.82■□□□□ 0.28
Rnf4-201ENSMUST00000030992 Skint5A7XUY5 1461 aa16.81■□□□□ 0.28
Rnf4-201ENSMUST00000030992 Gm156Q58A37 223 aa16.81■□□□□ 0.28
Rnf4-201ENSMUST00000030992 CrbnQ8C7D2 445 aa16.81■□□□□ 0.28
Rnf4-201ENSMUST00000030992 Lrrc7Q80TE7 1490 aa16.8■□□□□ 0.28
Rnf4-201ENSMUST00000030992 Dcaf11Q91VU6 549 aa16.79■□□□□ 0.28
Rnf4-201ENSMUST00000030992 Ttc37F8VPK0 1563 aa16.79■□□□□ 0.28
Rnf4-201ENSMUST00000030992 Adgrl3Q80TS3 1537 aa16.79■□□□□ 0.28
Rnf4-201ENSMUST00000030992 Kiaa1107Q80TK0 1369 aa16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms