RNA–Protein interactions for RNA: ENSMUST00000021706.10

Traf3-201, Transcript of TNF receptor-associated factor 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf3, Length 7,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-201ENSMUST00000021706 Chmp4bQ9D8B3 224 aaKnown RBP12.97□□□□□ -0.33
Traf3-201ENSMUST00000021706 Apaf1O88879 1249 aa12.96□□□□□ -0.34
Traf3-201ENSMUST00000021706 Dnttip2Q8R2M2 758 aaKnown RBP12.96□□□□□ -0.34
Traf3-201ENSMUST00000021706 Washc2Q6PGL7 1334 aa12.95□□□□□ -0.34
Traf3-201ENSMUST00000021706 Ppp2r1aQ76MZ3 589 aa12.95□□□□□ -0.34
Traf3-201ENSMUST00000021706 HnrnpuQ8VEK3 800 aaKnown RBP12.95□□□□□ -0.34
Traf3-201ENSMUST00000021706 Eif2s2Q99L45 331 aaKnown RBP12.94□□□□□ -0.34
Traf3-201ENSMUST00000021706 Eif4g1Q6NZJ6 1600 aaKnown RBP12.94□□□□□ -0.34
Traf3-201ENSMUST00000021706 Pes1Q9EQ61 584 aaKnown RBP12.94□□□□□ -0.34
Traf3-201ENSMUST00000021706 Sh3bp5Q9Z131 463 aa12.94□□□□□ -0.34
Traf3-201ENSMUST00000021706 Magi3Q9EQJ9 1476 aa12.94□□□□□ -0.34
Traf3-201ENSMUST00000021706 Kif16bB1AVY7 1312 aa12.93□□□□□ -0.34
Traf3-201ENSMUST00000021706 G3bp1P97855 465 aaKnown RBP12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Chmp4cQ9D7F7 232 aa12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Shroom2A2ALU4 1481 aa12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Rassf8Q8CJ96 419 aa12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Ak7Q9D2H2 614 aa12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Sart3Q9JLI8 962 aaKnown RBP12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Rfx7F8VPJ6 1459 aa12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Plekhg5Q66T02 1073 aa12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Afap1Q80YS6 731 aa12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Stk31Q99MW1 1018 aa12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Erich3F6QRE9 1637 aa12.92□□□□□ -0.34
Traf3-201ENSMUST00000021706 Rprd2Q6NXI6 1469 aaKnown RBP12.91□□□□□ -0.34
Traf3-201ENSMUST00000021706 Pcmtd1P59913 357 aa12.91□□□□□ -0.34
Traf3-201ENSMUST00000021706 Atp2b2Q9R0K7 1198 aa12.91□□□□□ -0.34
Traf3-201ENSMUST00000021706 Prex2Q3LAC4 1598 aa12.91□□□□□ -0.34
Traf3-201ENSMUST00000021706 Trappc8E9PWG2 1437 aa12.9□□□□□ -0.34
Traf3-201ENSMUST00000021706 Mlh3A0A1Y7VMP7 1443 aa12.9□□□□□ -0.34
Traf3-201ENSMUST00000021706 Q8BT18 775 aa12.9□□□□□ -0.34
Traf3-201ENSMUST00000021706 Brpf1B2RRD7 1212 aa12.9□□□□□ -0.35
Traf3-201ENSMUST00000021706 Ap3b2Q9JME5 1082 aa12.9□□□□□ -0.35
Traf3-201ENSMUST00000021706 Erich6bQ9D4S6 220 aa12.89□□□□□ -0.35
Traf3-201ENSMUST00000021706 Atp10dQ8K2X1 1416 aa12.89□□□□□ -0.35
Traf3-201ENSMUST00000021706 Arhgef40Q3UPH7 1517 aa12.89□□□□□ -0.35
Traf3-201ENSMUST00000021706 Gm21190A0A0G2JGJ6 266 aa12.89□□□□□ -0.35
Traf3-201ENSMUST00000021706 KarsQ99MN1 595 aaKnown RBP12.89□□□□□ -0.35
Traf3-201ENSMUST00000021706 Rfx1P48377 963 aa12.89□□□□□ -0.35
Traf3-201ENSMUST00000021706 Rapgef6Q5NCJ1 1609 aa12.89□□□□□ -0.35
Traf3-201ENSMUST00000021706 Triml2E9PW10 424 aa12.88□□□□□ -0.35
Traf3-201ENSMUST00000021706 Slc4a10Q5DTL9 1118 aa12.88□□□□□ -0.35
Traf3-201ENSMUST00000021706 Casc1Q6TDU8 730 aa12.88□□□□□ -0.35
Traf3-201ENSMUST00000021706 Adgrb2Q8CGM1 1561 aa12.88□□□□□ -0.35
Traf3-201ENSMUST00000021706 Ttll13A4Q9F6 804 aa12.88□□□□□ -0.35
Traf3-201ENSMUST00000021706 Ralbp1Q62172 648 aa12.87□□□□□ -0.35
Traf3-201ENSMUST00000021706 Gsto1O09131 240 aa12.87□□□□□ -0.35
Traf3-201ENSMUST00000021706 PrxO55103 1391 aa12.87□□□□□ -0.35
Traf3-201ENSMUST00000021706 Usp16Q99LG0 825 aa12.87□□□□□ -0.35
Traf3-201ENSMUST00000021706 MccE9PWI3 1003 aa12.87□□□□□ -0.35
Traf3-201ENSMUST00000021706 Unc13aQ4KUS2 1712 aa12.86□□□□□ -0.35
Traf3-201ENSMUST00000021706 Ttc21bQ0HA38 1315 aa12.86□□□□□ -0.35
Traf3-201ENSMUST00000021706 Ncoa1P70365 1447 aa12.86□□□□□ -0.35
Traf3-201ENSMUST00000021706 L3mbtl2P59178 703 aa12.85□□□□□ -0.35
Traf3-201ENSMUST00000021706 Fancd2Q80V62 1450 aa12.85□□□□□ -0.35
Traf3-201ENSMUST00000021706 Caskin1Q6P9K8 1431 aa12.85□□□□□ -0.35
Traf3-201ENSMUST00000021706 AU015836B2RUM3 263 aa12.85□□□□□ -0.35
Traf3-201ENSMUST00000021706 Rbm25B2RY56 838 aaKnown RBP12.85□□□□□ -0.35
Traf3-201ENSMUST00000021706 Trim58Q5NCC9 485 aa12.85□□□□□ -0.35
Traf3-201ENSMUST00000021706 CgnP59242 1191 aa12.84□□□□□ -0.35
Traf3-201ENSMUST00000021706 Ggt6Q6PDE7 497 aa12.84□□□□□ -0.35
Traf3-201ENSMUST00000021706 Lmo7E9PYF4 1699 aaKnown RBP12.84□□□□□ -0.35
Traf3-201ENSMUST00000021706 Igf1rQ60751 1373 aa12.84□□□□□ -0.35
Traf3-201ENSMUST00000021706 Stk11ipQ3TAA7 1072 aa12.84□□□□□ -0.35
Traf3-201ENSMUST00000021706 SlkO54988 1233 aa12.83□□□□□ -0.35
Traf3-201ENSMUST00000021706 Ylpm1Q9R0I7 1386 aaKnown RBP12.83□□□□□ -0.36
Traf3-201ENSMUST00000021706 Bcl2l13P59017 434 aa12.83□□□□□ -0.36
Traf3-201ENSMUST00000021706 Pik3c2gO70167 1506 aa12.83□□□□□ -0.36
Traf3-201ENSMUST00000021706 Zfp777B9EKF4 885 aa12.83□□□□□ -0.36
Traf3-201ENSMUST00000021706 Rsph4aQ8BYM7 716 aa12.83□□□□□ -0.36
Traf3-201ENSMUST00000021706 Chmp3Q9CQ10 224 aa12.83□□□□□ -0.36
Traf3-201ENSMUST00000021706 MecomP14404 1042 aa12.82□□□□□ -0.36
Traf3-201ENSMUST00000021706 Nup160Q9Z0W3 1402 aaKnown RBP12.82□□□□□ -0.36
Traf3-201ENSMUST00000021706 Rab3gap2Q8BMG7 1366 aa12.81□□□□□ -0.36
Traf3-201ENSMUST00000021706 Prkrip1Q9CWV6 186 aaKnown RBP12.81□□□□□ -0.36
Traf3-201ENSMUST00000021706 MpripP97434 1024 aa12.81□□□□□ -0.36
Traf3-201ENSMUST00000021706 Ythdc2B2RR83 1445 aaKnown RBP12.81□□□□□ -0.36
Traf3-201ENSMUST00000021706 Ubap1lG3UW59 384 aa12.8□□□□□ -0.36
Traf3-201ENSMUST00000021706 Ric3Q8BPM6 367 aa12.8□□□□□ -0.36
Traf3-201ENSMUST00000021706 Eif4g2Q62448 906 aaKnown RBP12.8□□□□□ -0.36
Traf3-201ENSMUST00000021706 Atp7aQ64430 1491 aa12.8□□□□□ -0.36
Traf3-201ENSMUST00000021706 Adcy10Q8C0T9 1614 aa12.8□□□□□ -0.36
Traf3-201ENSMUST00000021706 Lmtk2Q3TYD6 1471 aa12.79□□□□□ -0.36
Traf3-201ENSMUST00000021706 Polr3aB2RXC6 1390 aa12.79□□□□□ -0.36
Traf3-201ENSMUST00000021706 CrebrfQ8CDG5 640 aaKnown RBP12.79□□□□□ -0.36
Traf3-201ENSMUST00000021706 Tnnt2P50752 301 aa12.79□□□□□ -0.36
Traf3-201ENSMUST00000021706 Iffo2Q8R2V2 512 aa12.78□□□□□ -0.36
Traf3-201ENSMUST00000021706 Atxn3Q9CVD2 355 aa12.78□□□□□ -0.36
Traf3-201ENSMUST00000021706 Asxl1P59598 1514 aa12.78□□□□□ -0.36
Traf3-201ENSMUST00000021706 Ssh2Q5SW75 1423 aa12.78□□□□□ -0.36
Traf3-201ENSMUST00000021706 Tspyl2Q7TQI8 677 aa12.78□□□□□ -0.36
Traf3-201ENSMUST00000021706 Plekhh1Q80TI1 1356 aa12.78□□□□□ -0.36
Traf3-201ENSMUST00000021706 Cabp2Q9JLK4 216 aa12.77□□□□□ -0.36
Traf3-201ENSMUST00000021706 Cdk19Q8BWD8 501 aa12.77□□□□□ -0.36
Traf3-201ENSMUST00000021706 Peg3Q3URU2 1571 aa12.77□□□□□ -0.37
Traf3-201ENSMUST00000021706 Swt1Q9DBQ9 907 aa12.77□□□□□ -0.37
Traf3-201ENSMUST00000021706 Zranb1Q7M760 708 aa12.77□□□□□ -0.37
Traf3-201ENSMUST00000021706 AI481877A2ALV5 1481 aa12.77□□□□□ -0.37
Traf3-201ENSMUST00000021706 Znf326O88291 580 aa12.77□□□□□ -0.37
Traf3-201ENSMUST00000021706 Mapkbp1Q6NS57 1503 aa12.76□□□□□ -0.37
Traf3-201ENSMUST00000021706 Dusp27Q148W8 1138 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms