RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 ErbinQ80TH2 1402 aa23.52■■□□□ 1.36
Ubb-201ENSMUST00000019649 Rpgrip1Q9EPQ2 1331 aa23.51■■□□□ 1.35
Ubb-201ENSMUST00000019649 Med1Q925J9 1575 aa23.51■■□□□ 1.35
Ubb-201ENSMUST00000019649 PzpQ61838 1495 aa23.51■■□□□ 1.35
Ubb-201ENSMUST00000019649 Ccer2J3QPU5 274 aa23.5■■□□□ 1.35
Ubb-201ENSMUST00000019649 Stk24Q99KH8 431 aa23.5■■□□□ 1.35
Ubb-201ENSMUST00000019649 Myo3aQ8K3H5 1613 aa23.5■■□□□ 1.35
Ubb-201ENSMUST00000019649 Tubgcp6G5E8P0 1769 aa23.49■■□□□ 1.35
Ubb-201ENSMUST00000019649 Setd1aE9PYH6 1716 aa23.49■■□□□ 1.35
Ubb-201ENSMUST00000019649 Prrc2bQ7TPM1 1486 aaKnown RBP23.48■■□□□ 1.35
Ubb-201ENSMUST00000019649 Fbxo41Q6NS60 873 aa23.46■■□□□ 1.35
Ubb-201ENSMUST00000019649 Dhx9O70133 1380 aaKnown RBP23.45■■□□□ 1.35
Ubb-201ENSMUST00000019649 Hdac5Q9Z2V6 1113 aa23.44■■□□□ 1.34
Ubb-201ENSMUST00000019649 Rprd2Q6NXI6 1469 aaKnown RBP23.43■■□□□ 1.34
Ubb-201ENSMUST00000019649 Sall3Q62255 1320 aa23.43■■□□□ 1.34
Ubb-201ENSMUST00000019649 PalldQ9ET54 1408 aa23.43■■□□□ 1.34
Ubb-201ENSMUST00000019649 AatkQ80YE4 1365 aa23.42■■□□□ 1.34
Ubb-201ENSMUST00000019649 Dot1lQ6XZL8 1540 aa23.42■■□□□ 1.34
Ubb-201ENSMUST00000019649 Psme1P97371 249 aa23.41■■□□□ 1.34
Ubb-201ENSMUST00000019649 Pkd2O35245 966 aa23.4■■□□□ 1.34
Ubb-201ENSMUST00000019649 P3h3Q8CG70 732 aa23.4■■□□□ 1.34
Ubb-201ENSMUST00000019649 Ppip5k1A2ARP1 1436 aa23.4■■□□□ 1.34
Ubb-201ENSMUST00000019649 Thsd7aQ69ZU6 1645 aa23.39■■□□□ 1.33
Ubb-201ENSMUST00000019649 Gm13695A2AK44 830 aa23.38■■□□□ 1.33
Ubb-201ENSMUST00000019649 Arhgef28P97433 1693 aa23.38■■□□□ 1.33
Ubb-201ENSMUST00000019649 Myom1Q62234 1667 aaKnown RBP23.36■■□□□ 1.33
Ubb-201ENSMUST00000019649 Slit3Q9WVB4 1523 aa23.36■■□□□ 1.33
Ubb-201ENSMUST00000019649 Plxnc1Q9QZC2 1574 aa23.34■■□□□ 1.33
Ubb-201ENSMUST00000019649 Iqsec2Q5DU25 1478 aa23.34■■□□□ 1.33
Ubb-201ENSMUST00000019649 IghaA0A0A6YXW6 389 aa23.34■■□□□ 1.33
Ubb-201ENSMUST00000019649 Mier1Q5UAK0 511 aa23.3■■□□□ 1.32
Ubb-201ENSMUST00000019649 Ankrd36D3Z4K0 1415 aa23.27■■□□□ 1.32
Ubb-201ENSMUST00000019649 AU022751B1B0V2 589 aa23.27■■□□□ 1.32
Ubb-201ENSMUST00000019649 Rock1P70335 1354 aa23.26■■□□□ 1.31
Ubb-201ENSMUST00000019649 Asxl2Q8BZ32 1370 aa23.24■■□□□ 1.31
Ubb-201ENSMUST00000019649 Washc2Q6PGL7 1334 aa23.23■■□□□ 1.31
Ubb-201ENSMUST00000019649 Mroh3A0A1D5RM54 893 aa23.23■■□□□ 1.31
Ubb-201ENSMUST00000019649 Hspa1lP16627 641 aa23.22■■□□□ 1.31
Ubb-201ENSMUST00000019649 Col18a1P39061 1774 aa23.22■■□□□ 1.31
Ubb-201ENSMUST00000019649 Arap3Q8R5G7 1538 aa23.21■■□□□ 1.31
Ubb-201ENSMUST00000019649 Rims1Q99NE5 1463 aa23.21■■□□□ 1.31
Ubb-201ENSMUST00000019649 Tulp4Q9JIL5 1547 aa23.2■■□□□ 1.3
Ubb-201ENSMUST00000019649 MaddQ80U28 1577 aa23.2■■□□□ 1.3
Ubb-201ENSMUST00000019649 Pik3r4Q8VD65 1358 aa23.2■■□□□ 1.3
Ubb-201ENSMUST00000019649 Atp1b4Q99ME6 356 aa23.18■■□□□ 1.3
Ubb-201ENSMUST00000019649 Tns3Q5SSZ5 1440 aa23.17■■□□□ 1.3
Ubb-201ENSMUST00000019649 Q9D9H8 365 aa23.16■■□□□ 1.3
Ubb-201ENSMUST00000019649 Usp47Q8BY87 1376 aa23.16■■□□□ 1.3
Ubb-201ENSMUST00000019649 Mbd5B1AYB6 1498 aa23.16■■□□□ 1.3
Ubb-201ENSMUST00000019649 Shq1Q7TMX5 569 aa23.14■■□□□ 1.29
Ubb-201ENSMUST00000019649 Unc13bQ9Z1N9 1602 aa23.13■■□□□ 1.29
Ubb-201ENSMUST00000019649 Cdk13Q69ZA1 1511 aaKnown RBP23.13■■□□□ 1.29
Ubb-201ENSMUST00000019649 Adamts13Q769J6 1426 aa23.13■■□□□ 1.29
Ubb-201ENSMUST00000019649 DnmbpQ6TXD4 1580 aa23.11■■□□□ 1.29
Ubb-201ENSMUST00000019649 Amigo3Q8C2S7 508 aa23.11■■□□□ 1.29
Ubb-201ENSMUST00000019649 Eid3Q3V124 375 aa23.1■■□□□ 1.29
Ubb-201ENSMUST00000019649 Cep152A2AUM9 1736 aaKnown RBP23.1■■□□□ 1.29
Ubb-201ENSMUST00000019649 Bcl11bQ99PV8 884 aa23.09■■□□□ 1.29
Ubb-201ENSMUST00000019649 Cps1Q8C196 1500 aa23.08■■□□□ 1.28
Ubb-201ENSMUST00000019649 Ecm2Q5FW85 670 aa23.07■■□□□ 1.28
Ubb-201ENSMUST00000019649 Ift172Q6VH22 1749 aa23.06■■□□□ 1.28
Ubb-201ENSMUST00000019649 Slc52a2Q9D8F3 450 aa23.06■■□□□ 1.28
Ubb-201ENSMUST00000019649 Rgl3Q3UYI5 709 aa23.05■■□□□ 1.28
Ubb-201ENSMUST00000019649 Brinp3Q499E0 766 aa23.02■■□□□ 1.28
Ubb-201ENSMUST00000019649 Slain2Q8CI08 581 aa23.02■■□□□ 1.28
Ubb-201ENSMUST00000019649 Col14a1Q80X19 1797 aa23.02■■□□□ 1.28
Ubb-201ENSMUST00000019649 Cdk5rap2Q8K389 1822 aa23.01■■□□□ 1.27
Ubb-201ENSMUST00000019649 Ifit1bl1D3Z6F0 470 aa23■■□□□ 1.27
Ubb-201ENSMUST00000019649 Nwd1A6H603 1563 aa23■■□□□ 1.27
Ubb-201ENSMUST00000019649 HnrnpmQ9D0E1 729 aaKnown RBP22.99■■□□□ 1.27
Ubb-201ENSMUST00000019649 Hspa5P20029 655 aaKnown RBP22.98■■□□□ 1.27
Ubb-201ENSMUST00000019649 Evi5lH3BKQ3 813 aa22.98■■□□□ 1.27
Ubb-201ENSMUST00000019649 NalcnQ8BXR5 1738 aa22.97■■□□□ 1.27
Ubb-201ENSMUST00000019649 Srpk2O54781 681 aaKnown RBP22.97■■□□□ 1.27
Ubb-201ENSMUST00000019649 Pik3c2aQ61194 1686 aa22.96■■□□□ 1.27
Ubb-201ENSMUST00000019649 Tmem94Q7TSH8 1360 aa22.96■■□□□ 1.27
Ubb-201ENSMUST00000019649 Kif20bQ80WE4 1774 aaKnown RBP22.96■■□□□ 1.27
Ubb-201ENSMUST00000019649 Kdm2aP59997 1161 aa22.95■■□□□ 1.26
Ubb-201ENSMUST00000019649 Itsn2Q9Z0R6 1659 aa22.94■■□□□ 1.26
Ubb-201ENSMUST00000019649 Lrrc7Q80TE7 1490 aa22.94■■□□□ 1.26
Ubb-201ENSMUST00000019649 Fan1Q69ZT1 1020 aa22.92■■□□□ 1.26
Ubb-201ENSMUST00000019649 Sipa1l1Q8C0T5 1782 aa22.92■■□□□ 1.26
Ubb-201ENSMUST00000019649 Utp14aQ640M1 767 aaKnown RBP22.91■■□□□ 1.26
Ubb-201ENSMUST00000019649 Os9Q8K2C7 672 aa22.91■■□□□ 1.26
Ubb-201ENSMUST00000019649 Rreb1Q3UH06 1700 aaKnown RBP22.9■■□□□ 1.26
Ubb-201ENSMUST00000019649 Puf60Q3UEB3 564 aaKnown RBP22.9■■□□□ 1.26
Ubb-201ENSMUST00000019649 D430041D05RikF6ZGR6 1678 aa22.89■■□□□ 1.26
Ubb-201ENSMUST00000019649 C3P01027 1663 aa22.89■■□□□ 1.26
Ubb-201ENSMUST00000019649 Tom1O88746 492 aa22.89■■□□□ 1.25
Ubb-201ENSMUST00000019649 Cep170bQ80U49 1574 aa22.89■■□□□ 1.25
Ubb-201ENSMUST00000019649 Plekhg1F6S200 1446 aa22.89■■□□□ 1.25
Ubb-201ENSMUST00000019649 Usp32F8VPZ3 1604 aa22.88■■□□□ 1.25
Ubb-201ENSMUST00000019649 Grwd1Q810D6 446 aaKnown RBP22.88■■□□□ 1.25
Ubb-201ENSMUST00000019649 Stk26Q99JT2 416 aa22.88■■□□□ 1.25
Ubb-201ENSMUST00000019649 Dapk1Q80YE7 1442 aa22.88■■□□□ 1.25
Ubb-201ENSMUST00000019649 Gm20521D3Z5F7 333 aa22.87■■□□□ 1.25
Ubb-201ENSMUST00000019649 NefmP08553 848 aa22.87■■□□□ 1.25
Ubb-201ENSMUST00000019649 Gimap5Q8BWF2 308 aa22.86■■□□□ 1.25
Ubb-201ENSMUST00000019649 Polr3aB2RXC6 1390 aa22.85■■□□□ 1.25
Ubb-201ENSMUST00000019649 Atf3Q60765 181 aa22.85■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms