RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeastyeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USV1YPL230W YKE4P40544 346 aa2.78□□□□□ -1.96
USV1YPL230W MRPL49P40858 161 aaPredicted RBP2.78□□□□□ -1.96
USV1YPL230W MIG2P53035 382 aa2.78□□□□□ -1.96
USV1YPL230W ALG9P53868 555 aaKnown RBP2.78□□□□□ -1.96
USV1YPL230W YNL184CP53876 108 aa2.78□□□□□ -1.96
USV1YPL230W LPP1Q04396 274 aa2.78□□□□□ -1.96
USV1YPL230W TDA8Q6B2U8 126 aa2.78□□□□□ -1.96
USV1YPL230W IGO2Q9P305 131 aa2.78□□□□□ -1.96
USV1YPL230W HIS3P06633 220 aa2.77□□□□□ -1.97
USV1YPL230W DSF1P0CX08 502 aa2.77□□□□□ -1.97
USV1YPL230W YNR073CP0CX09 502 aa2.77□□□□□ -1.97
USV1YPL230W SNF4P12904 322 aa2.77□□□□□ -1.97
USV1YPL230W FIG1P38224 298 aa2.77□□□□□ -1.97
USV1YPL230W HMF1P40037 129 aaKnown RBP2.77□□□□□ -1.97
USV1YPL230W ECO1P43605 281 aa2.77□□□□□ -1.97
USV1YPL230W NUP49Q02199 472 aa2.77□□□□□ -1.97
USV1YPL230W RSM10Q03201 203 aa2.77□□□□□ -1.97
USV1YPL230W YLR053CQ12026 108 aa2.77□□□□□ -1.97
USV1YPL230W NSL1Q12143 216 aa2.77□□□□□ -1.97
USV1YPL230W TRX3P25372 127 aa2.76□□□□□ -1.97
USV1YPL230W AHC2P25649 128 aa2.76□□□□□ -1.97
USV1YPL230W SEC17P32602 292 aa2.76□□□□□ -1.97
USV1YPL230W PTM1P32857 523 aa2.76□□□□□ -1.97
USV1YPL230W POP4P38336 279 aa2.76□□□□□ -1.97
USV1YPL230W LSM4P40070 187 aaKnown RBP2.76□□□□□ -1.97
USV1YPL230W YOL160WQ08321 113 aa2.76□□□□□ -1.97
USV1YPL230W YOR283WQ12040 230 aaKnown RBP2.76□□□□□ -1.97
USV1YPL230W SIR2P06700 562 aa2.75□□□□□ -1.97
USV1YPL230W ARO7P32178 256 aa2.75□□□□□ -1.97
USV1YPL230W TKL2P33315 681 aa2.75□□□□□ -1.97
USV1YPL230W YIL059CP40520 121 aa2.75□□□□□ -1.97
USV1YPL230W PLP1Q04004 230 aa2.75□□□□□ -1.97
USV1YPL230W PEX12Q04370 399 aa2.75□□□□□ -1.97
USV1YPL230W YPR063CQ12160 140 aa2.75□□□□□ -1.97
USV1YPL230W PSF1Q12488 208 aa2.75□□□□□ -1.97
USV1YPL230W YHR214C-EQ8TGK0 99 aa2.75□□□□□ -1.97
USV1YPL230W FAB1P34756 2278 aa2.74□□□□□ -1.97
USV1YPL230W MBF1O14467 151 aaKnown RBP2.74□□□□□ -1.97
USV1YPL230W DPM1P14020 267 aaKnown RBP2.74□□□□□ -1.97
USV1YPL230W ATG22P25568 528 aa2.74□□□□□ -1.97
USV1YPL230W MEI4P29467 408 aa2.74□□□□□ -1.97
USV1YPL230W ACP1P32463 125 aa2.74□□□□□ -1.97
USV1YPL230W DER1P38307 211 aa2.74□□□□□ -1.97
USV1YPL230W YGP1P38616 354 aaKnown RBP2.74□□□□□ -1.97
USV1YPL230W NVJ1P38881 321 aa2.74□□□□□ -1.97
USV1YPL230W YAR068WP39564 161 aa2.74□□□□□ -1.97
USV1YPL230W EDC3P39998 551 aaKnown RBP2.74□□□□□ -1.97
USV1YPL230W PFS2P42841 465 aaKnown RBP2.74□□□□□ -1.97
USV1YPL230W YDR249CQ03787 373 aa2.74□□□□□ -1.97
USV1YPL230W HPT1Q04178 221 aaKnown RBP2.74□□□□□ -1.97
USV1YPL230W YLR031WQ07978 186 aa2.74□□□□□ -1.97
USV1YPL230W BBP1Q12365 385 aa2.74□□□□□ -1.97
USV1YPL230W RDI1Q12434 202 aa2.74□□□□□ -1.97
USV1YPL230W REP2P03872 296 aa2.73□□□□□ -1.97
USV1YPL230W Q0255P03881 472 aa2.73□□□□□ -1.97
USV1YPL230W RPL9AP05738 191 aaKnown RBP2.73□□□□□ -1.97
USV1YPL230W CMD1P06787 147 aaKnown RBP2.73□□□□□ -1.97
USV1YPL230W RAD10P06838 210 aa2.73□□□□□ -1.97
USV1YPL230W RPS23AP0CX29 145 aaKnown RBP2.73□□□□□ -1.97
USV1YPL230W RPS23BP0CX30 145 aa2.73□□□□□ -1.97
USV1YPL230W CCA1P21269 546 aa2.73□□□□□ -1.97
USV1YPL230W YCR090CP25654 182 aaKnown RBP2.73□□□□□ -1.97
USV1YPL230W SKG1P36169 355 aa2.73□□□□□ -1.97
USV1YPL230W YHR125WP38831 101 aa2.73□□□□□ -1.97
USV1YPL230W YER076CP40049 302 aa2.73□□□□□ -1.97
USV1YPL230W GLE2P40066 365 aa2.73□□□□□ -1.97
USV1YPL230W TIF34P40217 347 aaKnown RBP2.73□□□□□ -1.97
USV1YPL230W ARC15P40518 154 aaRIP-Chip data2.73□□□□□ -1.97not detected
USV1YPL230W YIR035CP40579 254 aa2.73□□□□□ -1.97
USV1YPL230W BUD13P46947 266 aaPredicted RBP2.73□□□□□ -1.97
USV1YPL230W RPL9BP51401 191 aaKnown RBP2.73□□□□□ -1.97
USV1YPL230W COS6P53344 381 aa2.73□□□□□ -1.97
USV1YPL230W RRP17Q04031 235 aaPredicted RBP2.73□□□□□ -1.97
USV1YPL230W ATG39Q06159 398 aa2.73□□□□□ -1.97
USV1YPL230W YPR170W-BP0C5R9 85 aa2.72□□□□□ -1.97
USV1YPL230W YLR156WP0CE96 114 aa2.72□□□□□ -1.97
USV1YPL230W YLR159WP0CE97 114 aa2.72□□□□□ -1.97
USV1YPL230W YLR161WP0CE98 114 aa2.72□□□□□ -1.97
USV1YPL230W RPB3P16370 318 aaKnown RBP2.72□□□□□ -1.97
USV1YPL230W PET9P18239 318 aaKnown RBP2.72□□□□□ -1.97
USV1YPL230W MRPS28P21771 286 aa2.72□□□□□ -1.97
USV1YPL230W SEC14P24280 304 aaKnown RBP2.72□□□□□ -1.97
USV1YPL230W AGA2P32781 87 aa2.72□□□□□ -1.97
USV1YPL230W UTP30P36144 274 aaKnown RBP2.72□□□□□ -1.97
USV1YPL230W FKS1P38631 1876 aaKnown RBP2.72□□□□□ -1.97
USV1YPL230W MED6P38782 295 aa2.72□□□□□ -1.97
USV1YPL230W AST2P39945 430 aaKnown RBP2.72□□□□□ -1.97
USV1YPL230W LSM1P47017 172 aaKnown RBP2.72□□□□□ -1.97
USV1YPL230W YGR026WP53217 278 aa2.72□□□□□ -1.97
USV1YPL230W PGA1P53896 198 aa2.72□□□□□ -1.97
USV1YPL230W GAS3Q03655 524 aa2.72□□□□□ -1.97
USV1YPL230W AIM34Q03673 198 aa2.72□□□□□ -1.97
USV1YPL230W SUE1Q06524 206 aa2.72□□□□□ -1.97
USV1YPL230W IES4Q08561 116 aa2.72□□□□□ -1.97
USV1YPL230W YOR268CQ08734 132 aa2.72□□□□□ -1.97
USV1YPL230W YPL162CQ12042 273 aa2.72□□□□□ -1.97
USV1YPL230W MPD1Q12404 318 aaKnown RBP2.72□□□□□ -1.97
USV1YPL230W YDL012CQ12489 107 aa2.72□□□□□ -1.97
USV1YPL230W RPS28BP0C0X0 67 aaKnown RBP2.71□□□□□ -1.98
USV1YPL230W RPS24AP0CX31 135 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms