RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C GAT3Q07928 141 aa3.41□□□□□ -1.86
SNF8YPL002C IRC25Q07951 179 aa3.41□□□□□ -1.86
SNF8YPL002C YKL018C-AQ3E7A7 99 aa3.41□□□□□ -1.86
SNF8YPL002C YPT6Q99260 215 aa3.41□□□□□ -1.86
SNF8YPL002C THP2O13539 261 aaKnown RBP3.4□□□□□ -1.87
SNF8YPL002C YOR304C-AO14468 76 aa3.4□□□□□ -1.87
SNF8YPL002C RPL25P04456 142 aaKnown RBP3.4□□□□□ -1.87
SNF8YPL002C ECT1P33412 323 aa3.4□□□□□ -1.87
SNF8YPL002C UPS2P35200 230 aa3.4□□□□□ -1.87
SNF8YPL002C RIB5P38145 238 aa3.4□□□□□ -1.87
SNF8YPL002C FMP23P38231 175 aa3.4□□□□□ -1.87
SNF8YPL002C TRM5P38793 499 aa3.4□□□□□ -1.87
SNF8YPL002C ISC1P40015 477 aaKnown RBP3.4□□□□□ -1.87
SNF8YPL002C FMP33P46998 180 aa3.4□□□□□ -1.87
SNF8YPL002C YIP5P53108 310 aa3.4□□□□□ -1.87
SNF8YPL002C ARL3Q02804 198 aa3.4□□□□□ -1.87
SNF8YPL002C FIN1Q03898 291 aa3.4□□□□□ -1.87
SNF8YPL002C NEJ1Q06148 342 aa3.4□□□□□ -1.87
SNF8YPL002C ZEO1Q08245 113 aa3.4□□□□□ -1.87
SNF8YPL002C YPL199CQ08954 240 aa3.4□□□□□ -1.87
SNF8YPL002C USB1Q12208 290 aaKnown RBP3.4□□□□□ -1.87
SNF8YPL002C TPT1Q12272 230 aaKnown RBP3.4□□□□□ -1.87
SNF8YPL002C NCA2Q12374 616 aa3.4□□□□□ -1.87
SNF8YPL002C HTB1P02293 131 aaKnown RBP3.39□□□□□ -1.87
SNF8YPL002C HTB2P02294 131 aa3.39□□□□□ -1.87
SNF8YPL002C MSW1P04803 379 aa3.39□□□□□ -1.87
SNF8YPL002C YBR121C-AP0C5L4 52 aa3.39□□□□□ -1.87
SNF8YPL002C NFT1P0CE68 1218 aa3.39□□□□□ -1.87
SNF8YPL002C EXO70P19658 623 aa3.39□□□□□ -1.87
SNF8YPL002C UBC8P28263 218 aa3.39□□□□□ -1.87
SNF8YPL002C NDC1P32500 655 aa3.39□□□□□ -1.87
SNF8YPL002C CBT1P36038 271 aaPredicted RBP3.39□□□□□ -1.87
SNF8YPL002C PRS4P38063 326 aaPredicted RBP3.39□□□□□ -1.87
SNF8YPL002C SBE22P38814 852 aa3.39□□□□□ -1.87
SNF8YPL002C GVP36P40531 326 aaKnown RBP3.39□□□□□ -1.87
SNF8YPL002C AIM24P47127 394 aa3.39□□□□□ -1.87
SNF8YPL002C YGR149WP48236 432 aa3.39□□□□□ -1.87
SNF8YPL002C CWC23P52868 283 aaPredicted RBP3.39□□□□□ -1.87
SNF8YPL002C YNR062CP53748 327 aa3.39□□□□□ -1.87
SNF8YPL002C ACL4Q03771 387 aa3.39□□□□□ -1.87
SNF8YPL002C YDR239CQ03780 787 aa3.39□□□□□ -1.87
SNF8YPL002C YDR415CQ04033 374 aaPredicted RBP3.39□□□□□ -1.87
SNF8YPL002C YMR130WQ04223 302 aa3.39□□□□□ -1.87
SNF8YPL002C FRQ1Q06389 190 aa3.39□□□□□ -1.87
SNF8YPL002C MIM1Q08176 113 aa3.39□□□□□ -1.87
SNF8YPL002C YOR029WQ12243 111 aa3.39□□□□□ -1.87
SNF8YPL002C SNU23Q12368 194 aaPredicted RBP3.39□□□□□ -1.87
SNF8YPL002C RAX2Q12465 1220 aa3.39□□□□□ -1.87
SNF8YPL002C YKL183C-AQ3E765 70 aa3.39□□□□□ -1.87
SNF8YPL002C CDC28P00546 298 aaKnown RBP3.38□□□□□ -1.87
SNF8YPL002C YGL041W-AP0C5N3 154 aa3.38□□□□□ -1.87
SNF8YPL002C YOL163WP0CF20 169 aa3.38□□□□□ -1.87
SNF8YPL002C GLC7P32598 312 aaKnown RBP3.38□□□□□ -1.87
SNF8YPL002C GSP1P32835 219 aaKnown RBP3.38□□□□□ -1.87
SNF8YPL002C GSP2P32836 220 aaKnown RBP3.38□□□□□ -1.87
SNF8YPL002C ECM15P35195 104 aa3.38□□□□□ -1.87
SNF8YPL002C ANR2P36090 516 aaPredicted RBP3.38□□□□□ -1.87
SNF8YPL002C YBR032WP38223 100 aa3.38□□□□□ -1.87
SNF8YPL002C CTR2P38865 189 aa3.38□□□□□ -1.87
SNF8YPL002C ALP1P38971 573 aa3.38□□□□□ -1.87
SNF8YPL002C RBG1P39729 369 aa3.38□□□□□ -1.87
SNF8YPL002C ERG28P40030 148 aa3.38□□□□□ -1.87
SNF8YPL002C PDS1P40316 373 aaPredicted RBP3.38□□□□□ -1.87
SNF8YPL002C STB1P42845 420 aa3.38□□□□□ -1.87
SNF8YPL002C YJL118WP47022 219 aa3.38□□□□□ -1.87
SNF8YPL002C YGL235WP53071 178 aa3.38□□□□□ -1.87
SNF8YPL002C GEP7P53171 287 aa3.38□□□□□ -1.87
SNF8YPL002C YGR017WP53210 297 aa3.38□□□□□ -1.87
SNF8YPL002C YNR066CP53752 436 aa3.38□□□□□ -1.87
SNF8YPL002C SAE3P89114 91 aa3.38□□□□□ -1.87
SNF8YPL002C TPS1Q00764 495 aaKnown RBP3.38□□□□□ -1.87
SNF8YPL002C YPL080CQ02826 108 aa3.38□□□□□ -1.87
SNF8YPL002C PEX10Q05568 337 aa3.38□□□□□ -1.87
SNF8YPL002C HRT1Q08273 121 aa3.38□□□□□ -1.87
SNF8YPL002C RRS1Q08746 203 aaKnown RBP3.38□□□□□ -1.87
SNF8YPL002C MCT1Q12283 360 aa3.38□□□□□ -1.87
SNF8YPL002C WTM1Q12363 437 aaKnown RBP3.38□□□□□ -1.87
SNF8YPL002C RPL39P04650 51 aa3.37□□□□□ -1.87
SNF8YPL002C PMR1P13586 950 aa3.37□□□□□ -1.87
SNF8YPL002C DPM1P14020 267 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C RPL3P14126 387 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C PET9P18239 318 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C TRR1P29509 319 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C RAD23P32628 398 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C PAD1P33751 242 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SNF8YPL002C YNK1P36010 153 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C SPC34P36131 295 aa3.37□□□□□ -1.87
SNF8YPL002C GPI18P38211 433 aa3.37□□□□□ -1.87
SNF8YPL002C SHG1P38337 142 aa3.37□□□□□ -1.87
SNF8YPL002C DDI1P40087 428 aa3.37□□□□□ -1.87
SNF8YPL002C FLX1P40464 311 aa3.37□□□□□ -1.87
SNF8YPL002C PFS2P42841 465 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C SFH5P47008 294 aa3.37□□□□□ -1.87
SNF8YPL002C RBL2P48606 106 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C IMD4P50094 524 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C DID2P69771 204 aa3.37□□□□□ -1.87
SNF8YPL002C NUP49Q02199 472 aa3.37□□□□□ -1.87
SNF8YPL002C GPI17Q04080 534 aa3.37□□□□□ -1.87
SNF8YPL002C YDR391CQ04170 232 aa3.37□□□□□ -1.87
SNF8YPL002C SNT309Q06091 175 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms