RNA–Protein interactions for RNA: YNL325C

FIG4, Transcript of Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase, yeast

Gene FIG4, Length 2,640 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIG4	YNL325C	YDR124W	Q04608	324 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	YPR172W	Q06608	200 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	YOR029W	Q12243	111 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	YBL008W-A	Q3E821	79 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	SPT3	P06844	337 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	YCR102C	P25608	368 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	USE1	P53146	245 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	TOS8	P53147	276 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	SNZ2	P53824	298 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	YNL134C	P53912	376 aa	Known RBP	0.82	□□□□□ -2.28
FIG4	YNL325C	RGM1	Q00453	211 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	YPR098C	Q06089	161 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	SPO77	Q06134	477 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	PAM18	Q07914	168 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	YPL150W	Q12152	901 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	YPR011C	Q12251	326 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	YHR139C-A	O13536	103 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	MRP1	P10662	321 aa	Known RBP	0.81	□□□□□ -2.28
FIG4	YNL325C	GRX2	P17695	143 aa	Known RBP	0.81	□□□□□ -2.28
FIG4	YNL325C	YOR062C	P36025	268 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	FZO1	P38297	855 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.81	□□□□□ -2.28	not detected
FIG4	YNL325C	FMC1	P40491	155 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	RSM25	P40496	264 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	YFH7	P43591	353 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	DAN1	P47178	298 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	DAD3	P69850	94 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	YLR030W	Q07967	263 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	MED4	Q12343	284 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	SAS5	Q99314	248 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	NTF2	P33331	125 aa	Known RBP	0.81	□□□□□ -2.28
FIG4	YNL325C	RCN1	P36054	211 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	MCM22	P47167	239 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	YGL159W	P53110	370 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	GTR2	P53290	341 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	SLM2	P53955	656 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	PST1	Q12355	444 aa		0.81	□□□□□ -2.28
FIG4	YNL325C	TCP1	P12612	559 aa	Known RBP	0.8	□□□□□ -2.28
FIG4	YNL325C	VPS21	P36017	210 aa	Known RBP	0.8	□□□□□ -2.28
FIG4	YNL325C	RPF1	P38805	295 aa	Known RBP	0.8	□□□□□ -2.28
FIG4	YNL325C	YMR279C	Q03263	540 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	YPR147C	Q06522	304 aa	Known RBP	0.8	□□□□□ -2.28
FIG4	YNL325C	SUE1	Q06524	206 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	ARR2	Q06597	130 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	MSA1	Q08471	629 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	BTS1	Q12051	335 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	NRG2	P38082	220 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	URA8	P38627	578 aa	Predicted RBP	0.8	□□□□□ -2.28
FIG4	YNL325C	YER085C	P40058	173 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	ARC15	P40518	154 aa	RIP-Chip data	0.8	□□□□□ -2.28	not detected
FIG4	YNL325C	BNA6	P43619	295 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	YJR056C	P47115	236 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	INM2	Q05533	292 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	RDS3	Q06835	107 aa	Predicted RBP	0.8	□□□□□ -2.28
FIG4	YNL325C	RRP40	Q08285	240 aa	Known RBP	0.8	□□□□□ -2.28
FIG4	YNL325C	AKR2	Q12013	749 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	YOL107W	Q12239	342 aa		0.8	□□□□□ -2.28
FIG4	YNL325C	MLP1	Q02455	1875 aa	Known RBP	0.8	□□□□□ -2.28
FIG4	YNL325C	BCY1	P07278	416 aa	Known RBP	0.79	□□□□□ -2.28
FIG4	YNL325C	YPT52	P36018	234 aa	Known RBP	0.79	□□□□□ -2.28
FIG4	YNL325C	MSA2	P36157	363 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	ECM33	P38248	429 aa	Known RBP	0.79	□□□□□ -2.28
FIG4	YNL325C	IRC22	P40006	225 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	SNX4	P47057	423 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	RMR1	P53060	241 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	GOT1	Q03554	138 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	YMR321C	Q04898	105 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	SNU23	Q12368	194 aa	Predicted RBP	0.79	□□□□□ -2.28
FIG4	YNL325C	JIP3	O13555	125 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	ERG24	P32462	438 aa	Known RBP	0.79	□□□□□ -2.28
FIG4	YNL325C	SRY1	P36007	326 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	LDB7	P38210	180 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	YGP1	P38616	354 aa	Known RBP	0.79	□□□□□ -2.28
FIG4	YNL325C	YHR125W	P38831	101 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	YHR127W	P38833	243 aa	Known RBP	0.79	□□□□□ -2.28
FIG4	YNL325C	PEX17	P40155	199 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	PRM10	P42946	383 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	GCN20	P43535	752 aa	Known RBP	0.79	□□□□□ -2.28
FIG4	YNL325C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
FIG4	YNL325C	PET117	Q02771	107 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	YLR036C	Q07986	203 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	NIP7	Q08962	181 aa	Known RBP	0.79	□□□□□ -2.28
FIG4	YNL325C	TPO4	Q12256	659 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	RAD50	P12753	1312 aa		0.79	□□□□□ -2.28
FIG4	YNL325C	RAS2	P01120	322 aa	Known RBP	0.78	□□□□□ -2.28
FIG4	YNL325C	RPL9A	P05738	191 aa	Known RBP	0.78	□□□□□ -2.28
FIG4	YNL325C	SCL1	P21243	252 aa	Known RBP	0.78	□□□□□ -2.28
FIG4	YNL325C	MRPL39	P36533	70 aa		0.78	□□□□□ -2.28
FIG4	YNL325C	SSH1	P38353	490 aa	Known RBP	0.78	□□□□□ -2.28
FIG4	YNL325C	SIP3	P38717	1229 aa		0.78	□□□□□ -2.28
FIG4	YNL325C	RTC3	P38804	111 aa	Predicted RBP	0.78	□□□□□ -2.28
FIG4	YNL325C	YJL027C	P47063	138 aa	Predicted RBP	0.78	□□□□□ -2.28
FIG4	YNL325C	HAM1	P47119	197 aa	Known RBP	0.78	□□□□□ -2.28
FIG4	YNL325C	DSK2	P48510	373 aa		0.78	□□□□□ -2.28
FIG4	YNL325C	RPL9B	P51401	191 aa	Known RBP	0.78	□□□□□ -2.28
FIG4	YNL325C	YGR026W	P53217	278 aa		0.78	□□□□□ -2.28
FIG4	YNL325C	YDR209C	Q03480	137 aa		0.78	□□□□□ -2.28
FIG4	YNL325C	SLD7	Q08457	257 aa		0.78	□□□□□ -2.28
FIG4	YNL325C	RRS1	Q08746	203 aa	Known RBP	0.78	□□□□□ -2.28
FIG4	YNL325C	PSF1	Q12488	208 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 81.7 ms