RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C YJR011CP47086 261 aaPredicted RBP3.06□□□□□ -1.92
SHH3YMR118C SEH1P53011 349 aaKnown RBP3.06□□□□□ -1.92
SHH3YMR118C BRR6P53062 197 aa3.06□□□□□ -1.92
SHH3YMR118C FHN1P53279 174 aa3.06□□□□□ -1.92
SHH3YMR118C PAU4P53427 120 aa3.06□□□□□ -1.92
SHH3YMR118C SMM1P53720 384 aaKnown RBP3.06□□□□□ -1.92
SHH3YMR118C LEE1Q02799 301 aaKnown RBP3.06□□□□□ -1.92
SHH3YMR118C PAU10Q03050 120 aa3.06□□□□□ -1.92
SHH3YMR118C EKI1Q03764 534 aa3.06□□□□□ -1.92
SHH3YMR118C YAP6Q03935 383 aa3.06□□□□□ -1.92
SHH3YMR118C ATC1Q04005 294 aa3.06□□□□□ -1.92
SHH3YMR118C YMR082CQ04276 118 aa3.06□□□□□ -1.92
SHH3YMR118C DPB4Q04603 196 aaKnown RBP3.06□□□□□ -1.92
SHH3YMR118C FSH2Q05015 223 aa3.06□□□□□ -1.92
SHH3YMR118C PAL1Q05518 499 aaKnown RBP3.06□□□□□ -1.92
SHH3YMR118C ENB1Q08299 606 aa3.06□□□□□ -1.92
SHH3YMR118C PAU20Q08322 120 aa3.06□□□□□ -1.92
SHH3YMR118C FCY22Q12119 530 aa3.06□□□□□ -1.92
SHH3YMR118C SME1Q12330 94 aaPredicted RBP3.06□□□□□ -1.92
SHH3YMR118C PAA1Q12447 191 aaKnown RBP3.06□□□□□ -1.92
SHH3YMR118C RAX2Q12465 1220 aa3.06□□□□□ -1.92
SHH3YMR118C PAU9Q3E770 120 aa3.06□□□□□ -1.92
SHH3YMR118C YDL085C-AQ3E7B7 68 aaKnown RBP3.06□□□□□ -1.92
SHH3YMR118C YPR014CQ6B0W2 109 aa3.06□□□□□ -1.92
SHH3YMR118C SCEIP03882 235 aa3.05□□□□□ -1.92
SHH3YMR118C MSW1P04803 379 aa3.05□□□□□ -1.92
SHH3YMR118C GAL7P08431 366 aa3.05□□□□□ -1.92
SHH3YMR118C RPL31AP0C2H8 113 aaKnown RBP3.05□□□□□ -1.92
SHH3YMR118C RPL31BP0C2H9 113 aaKnown RBP3.05□□□□□ -1.92
SHH3YMR118C BGL2P15703 313 aaKnown RBP3.05□□□□□ -1.92
SHH3YMR118C MRS4P23500 304 aa3.05□□□□□ -1.92
SHH3YMR118C ATG15P25641 520 aa3.05□□□□□ -1.92
SHH3YMR118C PPA2P28239 310 aa3.05□□□□□ -1.92
SHH3YMR118C AFG1P32317 509 aa3.05□□□□□ -1.92
SHH3YMR118C MKK2P32491 506 aa3.05□□□□□ -1.92
SHH3YMR118C AGA2P32781 87 aa3.05□□□□□ -1.92
SHH3YMR118C UPS2P35200 230 aa3.05□□□□□ -1.92
SHH3YMR118C YKL075CP36083 450 aa3.05□□□□□ -1.92
SHH3YMR118C RPL14AP36105 138 aaKnown RBP3.05□□□□□ -1.92
SHH3YMR118C FRM2P37261 193 aa3.05□□□□□ -1.92
SHH3YMR118C YBR096WP38256 230 aa3.05□□□□□ -1.92
SHH3YMR118C RPL14BP38754 138 aaKnown RBP3.05□□□□□ -1.92
SHH3YMR118C YHR180WP38868 163 aa3.05□□□□□ -1.92
SHH3YMR118C YAL037WP39728 267 aa3.05□□□□□ -1.92
SHH3YMR118C ZIM17P42844 174 aa3.05□□□□□ -1.92
SHH3YMR118C ATG27P46989 271 aa3.05□□□□□ -1.92
SHH3YMR118C RPA34P47006 233 aaPredicted RBP3.05□□□□□ -1.92
SHH3YMR118C YGR149WP48236 432 aa3.05□□□□□ -1.92
SHH3YMR118C ERG25P53045 309 aa3.05□□□□□ -1.92
SHH3YMR118C RNH201P53942 307 aa3.05□□□□□ -1.92
SHH3YMR118C ERG13P54839 491 aaKnown RBP3.05□□□□□ -1.92
SHH3YMR118C SAE3P89114 91 aa3.05□□□□□ -1.92
SHH3YMR118C RHO3Q00245 231 aaKnown RBP3.05□□□□□ -1.92
SHH3YMR118C YVH1Q02256 364 aaKnown RBP3.05□□□□□ -1.92
SHH3YMR118C NCE101Q02820 53 aa3.05□□□□□ -1.92
SHH3YMR118C MRP51Q02950 344 aa3.05□□□□□ -1.92
SHH3YMR118C YMR090WQ04304 227 aaKnown RBP3.05□□□□□ -1.92
SHH3YMR118C PIN3Q06449 215 aa3.05□□□□□ -1.92
SHH3YMR118C NDE2Q07500 545 aa3.05□□□□□ -1.92
SHH3YMR118C YDL242WQ07746 117 aa3.05□□□□□ -1.92
SHH3YMR118C OPI10Q08202 246 aa3.05□□□□□ -1.92
SHH3YMR118C POM33Q12164 279 aa3.05□□□□□ -1.92
SHH3YMR118C ATG5Q12380 294 aa3.05□□□□□ -1.92
SHH3YMR118C YOP1Q12402 180 aa3.05□□□□□ -1.92
SHH3YMR118C LAS17Q12446 633 aa3.05□□□□□ -1.92
SHH3YMR118C AGC1Q12482 902 aa3.05□□□□□ -1.92
SHH3YMR118C ILV5P06168 395 aaKnown RBP3.04□□□□□ -1.92
SHH3YMR118C RPS25BP0C0T4 108 aaKnown RBP3.04□□□□□ -1.92
SHH3YMR118C FPR1P20081 114 aaKnown RBP3.04□□□□□ -1.92
SHH3YMR118C AIM17P23180 465 aaKnown RBP3.04□□□□□ -1.92
SHH3YMR118C ELO2P25358 347 aa3.04□□□□□ -1.92
SHH3YMR118C GLC7P32598 312 aaKnown RBP3.04□□□□□ -1.92
SHH3YMR118C ELF1P36053 145 aa3.04□□□□□ -1.92
SHH3YMR118C FMP46P36141 133 aaKnown RBP3.04□□□□□ -1.92
SHH3YMR118C FIG1P38224 298 aa3.04□□□□□ -1.92
SHH3YMR118C CUE1P38428 203 aa3.04□□□□□ -1.92
SHH3YMR118C MED6P38782 295 aa3.04□□□□□ -1.92
SHH3YMR118C LYS1P38998 373 aaRIP-Chip data3.04□□□□□ -1.92not detected
SHH3YMR118C FMP10P40098 244 aa3.04□□□□□ -1.92
SHH3YMR118C LRO1P40345 661 aa3.04□□□□□ -1.92
SHH3YMR118C YJR012CP47087 207 aa3.04□□□□□ -1.92
SHH3YMR118C MSO1P53604 210 aaKnown RBP3.04□□□□□ -1.92
SHH3YMR118C APS2Q00381 147 aa3.04□□□□□ -1.92
SHH3YMR118C CWC27Q02770 301 aa3.04□□□□□ -1.92
SHH3YMR118C STD1Q02794 444 aa3.04□□□□□ -1.92
SHH3YMR118C YLR030WQ07967 263 aa3.04□□□□□ -1.92
SHH3YMR118C MIM1Q08176 113 aa3.04□□□□□ -1.92
SHH3YMR118C TGS1Q12052 315 aa3.04□□□□□ -1.92
SHH3YMR118C MCP1Q12106 302 aa3.04□□□□□ -1.92
SHH3YMR118C PRR2Q12310 699 aa3.04□□□□□ -1.92
SHH3YMR118C YOR343CQ12484 108 aa3.04□□□□□ -1.92
SHH3YMR118C RPS25AQ3E792 108 aaPredicted RBP3.04□□□□□ -1.92
SHH3YMR118C COA2Q3E823 68 aa3.04□□□□□ -1.92
SHH3YMR118C SLH1P53327 1967 aaKnown RBP3.03□□□□□ -1.92
SHH3YMR118C YDR157WA0A023PZE8 133 aa3.03□□□□□ -1.92
SHH3YMR118C YMR084WA2P2R3 262 aa3.03□□□□□ -1.92
SHH3YMR118C CET1O13297 549 aaPredicted RBP3.03□□□□□ -1.92
SHH3YMR118C RPL9AP05738 191 aaKnown RBP3.03□□□□□ -1.92
SHH3YMR118C YLL053CP0CD98 152 aa3.03□□□□□ -1.92
SHH3YMR118C MDH2P22133 377 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 69 ms