RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	YPL119C-A	Q3E751	87 aa		0.68	□□□□□ -2.3
UBC7	YMR022W	IKI3	Q06706	1349 aa	Known RBP	0.67	□□□□□ -2.3
UBC7	YMR022W	HIS1	P00498	297 aa	Known RBP	0.67	□□□□□ -2.3
UBC7	YMR022W	FRS2	P15625	503 aa	Known RBP	0.67	□□□□□ -2.3
UBC7	YMR022W	MRPL39	P36533	70 aa		0.67	□□□□□ -2.3
UBC7	YMR022W	PNC1	P53184	216 aa	Known RBP	0.67	□□□□□ -2.3
UBC7	YMR022W	YLR162W	Q06235	118 aa		0.67	□□□□□ -2.3
UBC7	YMR022W	ARV1	Q06541	321 aa		0.67	□□□□□ -2.3
UBC7	YMR022W	SYC1	Q08553	188 aa	Predicted RBP	0.67	□□□□□ -2.3
UBC7	YMR022W	RRS1	Q08746	203 aa	Known RBP	0.67	□□□□□ -2.3
UBC7	YMR022W	YPL257W	Q08974	193 aa		0.67	□□□□□ -2.3
UBC7	YMR022W	VAR1	P02381	398 aa		0.66	□□□□□ -2.3
UBC7	YMR022W	QCR8	P08525	94 aa		0.66	□□□□□ -2.3
UBC7	YMR022W	ERG24	P32462	438 aa	Known RBP	0.66	□□□□□ -2.3
UBC7	YMR022W	YKL070W	P36087	169 aa		0.66	□□□□□ -2.3
UBC7	YMR022W	PEX18	P38855	283 aa		0.66	□□□□□ -2.3
UBC7	YMR022W	DDI1	P40087	428 aa		0.66	□□□□□ -2.3
UBC7	YMR022W	SMD3	P43321	101 aa	Known RBP	0.66	□□□□□ -2.3
UBC7	YMR022W	PRO2	P54885	456 aa	Known RBP	0.66	□□□□□ -2.3
UBC7	YMR022W	COX5A	P00424	153 aa		0.65	□□□□□ -2.31
UBC7	YMR022W	CPA1	P07258	411 aa	Known RBP	0.65	□□□□□ -2.31
UBC7	YMR022W	PET9	P18239	318 aa	Known RBP	0.65	□□□□□ -2.31
UBC7	YMR022W	OPI1	P21957	404 aa		0.65	□□□□□ -2.31
UBC7	YMR022W	TCD1	P38756	429 aa		0.65	□□□□□ -2.31
UBC7	YMR022W	DSN1	P40568	576 aa		0.65	□□□□□ -2.31
UBC7	YMR022W	MRH4	P53166	561 aa		0.65	□□□□□ -2.31
UBC7	YMR022W	GTR2	P53290	341 aa		0.65	□□□□□ -2.31
UBC7	YMR022W	YMR007W	Q03675	126 aa		0.65	□□□□□ -2.31
UBC7	YMR022W	ATG39	Q06159	398 aa		0.65	□□□□□ -2.31
UBC7	YMR022W	GMC2	Q06201	188 aa		0.65	□□□□□ -2.31
UBC7	YMR022W	SNF8	Q12483	233 aa		0.65	□□□□□ -2.31
UBC7	YMR022W	STT4	P37297	1900 aa		0.64	□□□□□ -2.31
UBC7	YMR022W	MRP1	P10662	321 aa	Known RBP	0.64	□□□□□ -2.31
UBC7	YMR022W	UPS2	P35200	230 aa		0.64	□□□□□ -2.31
UBC7	YMR022W	MSA2	P36157	363 aa		0.64	□□□□□ -2.31
UBC7	YMR022W	RPL37A	P49166	88 aa	Known RBP	0.64	□□□□□ -2.31
UBC7	YMR022W	YGL159W	P53110	370 aa		0.64	□□□□□ -2.31
UBC7	YMR022W	TOS8	P53147	276 aa		0.64	□□□□□ -2.31
UBC7	YMR022W	MPP6	P53725	186 aa	Predicted RBP	0.64	□□□□□ -2.31
UBC7	YMR022W	YNL134C	P53912	376 aa	Known RBP	0.64	□□□□□ -2.31
UBC7	YMR022W	MSF1	P08425	469 aa		0.63	□□□□□ -2.31
UBC7	YMR022W	MEK1	P24719	497 aa	Predicted RBP	0.63	□□□□□ -2.31
UBC7	YMR022W	YKL102C	P34249	101 aa		0.63	□□□□□ -2.31
UBC7	YMR022W	TMA19	P35691	167 aa	Known RBP	0.63	□□□□□ -2.31
UBC7	YMR022W	YAR068W	P39564	161 aa		0.63	□□□□□ -2.31
UBC7	YMR022W	NUP84	P52891	726 aa		0.63	□□□□□ -2.31
UBC7	YMR022W	YML096W	Q04489	525 aa		0.63	□□□□□ -2.31
UBC7	YMR022W	ADH6	Q04894	360 aa	Known RBP	0.63	□□□□□ -2.31
UBC7	YMR022W	RRP40	Q08285	240 aa	Known RBP	0.63	□□□□□ -2.31
UBC7	YMR022W	REX3	Q12090	404 aa		0.63	□□□□□ -2.31
UBC7	YMR022W	HAP2	P06774	265 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	YJL197C-A	P0C5P0	93 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	YKR104W	P0CE69	306 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	RME1	P32338	300 aa	Known RBP	0.62	□□□□□ -2.31
UBC7	YMR022W	EBP2	P36049	427 aa	Known RBP	0.62	□□□□□ -2.31
UBC7	YMR022W	MEP1	P40260	492 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	TIR3	P40552	269 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	PHB1	P40961	287 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	RPL33B	P41056	107 aa	Known RBP	0.62	□□□□□ -2.31
UBC7	YMR022W	LSB1	P53281	241 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	YDR209C	Q03480	137 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	RNH1	Q04740	348 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	YLR413W	Q06689	675 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	HEM25	Q07534	307 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	YLR030W	Q07967	263 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	TPO4	Q12256	659 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	HTL1	Q9URQ5	78 aa		0.62	□□□□□ -2.31
UBC7	YMR022W	MLP1	Q02455	1875 aa	Known RBP	0.61	□□□□□ -2.31
UBC7	YMR022W	CCW14	O13547	238 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	DBF2	P22204	572 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	SGE1	P33335	543 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	KDX1	P36005	433 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	TVP38	P36164	337 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	MRX3	P38172	270 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	CTR2	P38865	189 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	ERG10	P41338	398 aa	Known RBP	0.61	□□□□□ -2.31
UBC7	YMR022W	RPL37B	P51402	88 aa	Known RBP	0.61	□□□□□ -2.31
UBC7	YMR022W	SAY1	P53324	424 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	CDC14	Q00684	551 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	GAS3	Q03655	524 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	SSQ1	Q05931	657 aa	Predicted RBP	0.61	□□□□□ -2.31
UBC7	YMR022W	ARR2	Q06597	130 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	MSA1	Q08471	629 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	FMP16	Q12497	93 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	YOR020W-A	Q3E824	90 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	SAC3	P46674	1301 aa		0.61	□□□□□ -2.31
UBC7	YMR022W	UBC6	P33296	250 aa	Predicted RBP	0.6	□□□□□ -2.31
UBC7	YMR022W	MRPL40	P36534	297 aa		0.6	□□□□□ -2.31
UBC7	YMR022W	COA1	P40452	197 aa		0.6	□□□□□ -2.31
UBC7	YMR022W	YJR056C	P47115	236 aa		0.6	□□□□□ -2.31
UBC7	YMR022W	HAM1	P47119	197 aa	Known RBP	0.6	□□□□□ -2.31
UBC7	YMR022W	ILM1	P47155	203 aa		0.6	□□□□□ -2.31
UBC7	YMR022W	KAP114	P53067	1004 aa		0.6	□□□□□ -2.31
UBC7	YMR022W	EGD1	Q02642	157 aa	Known RBP	0.6	□□□□□ -2.31
UBC7	YMR022W	YPR098C	Q06089	161 aa		0.6	□□□□□ -2.31
UBC7	YMR022W	MRPL23	Q12487	163 aa	Predicted RBP	0.6	□□□□□ -2.31
UBC7	YMR022W	FAS1	P07149	2051 aa	Known RBP	0.6	□□□□□ -2.31
UBC7	YMR022W	YER188C-A	P0C0V2	99 aa		0.59	□□□□□ -2.31
UBC7	YMR022W	TPM1	P17536	199 aa	Known RBP	0.59	□□□□□ -2.31
UBC7	YMR022W	GRX2	P17695	143 aa	Known RBP	0.59	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms