RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C YBL008W-AQ3E821 79 aa2.37□□□□□ -2.03
PML39YML107C SEY1Q99287 776 aa2.37□□□□□ -2.03
PML39YML107C QRI5P32344 111 aa2.36□□□□□ -2.03
PML39YML107C RPC17P47076 161 aa2.36□□□□□ -2.03
PML39YML107C HOC1P47124 396 aa2.36□□□□□ -2.03
PML39YML107C MDM34P53083 459 aa2.36□□□□□ -2.03
PML39YML107C EMI1Q04406 187 aa2.36□□□□□ -2.03
PML39YML107C UBR2Q07963 1872 aa2.35□□□□□ -2.03
PML39YML107C YMR31P19955 123 aa2.35□□□□□ -2.03
PML39YML107C RPL24BP24000 155 aaKnown RBP2.35□□□□□ -2.03
PML39YML107C EHD3P28817 500 aa2.35□□□□□ -2.03
PML39YML107C ATP7P30902 174 aa2.35□□□□□ -2.03
PML39YML107C VMA6P32366 345 aaKnown RBP2.35□□□□□ -2.03
PML39YML107C YGP1P38616 354 aaKnown RBP2.35□□□□□ -2.03
PML39YML107C PRS2P38620 318 aaKnown RBP2.35□□□□□ -2.03
PML39YML107C YER121WP40076 114 aa2.35□□□□□ -2.03
PML39YML107C YJL016WP47072 561 aa2.35□□□□□ -2.03
PML39YML107C YJR146WP47174 117 aa2.35□□□□□ -2.03
PML39YML107C SLM2P53955 656 aa2.35□□□□□ -2.03
PML39YML107C FAR8Q05040 523 aa2.35□□□□□ -2.03
PML39YML107C GGA1Q06336 557 aa2.35□□□□□ -2.03
PML39YML107C VPS68Q12016 184 aa2.35□□□□□ -2.03
PML39YML107C YRA1Q12159 226 aaKnown RBP2.35□□□□□ -2.03
PML39YML107C YPR011CQ12251 326 aa2.35□□□□□ -2.03
PML39YML107C RPL27AP0C2H6 136 aaKnown RBP2.34□□□□□ -2.03
PML39YML107C RPL27BP0C2H7 136 aaKnown RBP2.34□□□□□ -2.03
PML39YML107C STE18P18852 110 aa2.34□□□□□ -2.03
PML39YML107C PPH21P23594 369 aa2.34□□□□□ -2.03
PML39YML107C COG3P40094 801 aa2.34□□□□□ -2.03
PML39YML107C JHD2P47156 728 aaPredicted RBP2.34□□□□□ -2.03
PML39YML107C YIP3P53633 176 aa2.34□□□□□ -2.03
PML39YML107C ATG17Q06410 417 aa2.34□□□□□ -2.03
PML39YML107C YPR147CQ06522 304 aaKnown RBP2.34□□□□□ -2.03
PML39YML107C RPS24AP0CX31 135 aaKnown RBP2.33□□□□□ -2.04
PML39YML107C RPS24BP0CX32 135 aaKnown RBP2.33□□□□□ -2.04
PML39YML107C RFA3P26755 122 aaKnown RBP2.33□□□□□ -2.04
PML39YML107C VPS21P36017 210 aaKnown RBP2.33□□□□□ -2.04
PML39YML107C ECM13P38195 257 aa2.33□□□□□ -2.04
PML39YML107C YHL026CP38740 315 aa2.33□□□□□ -2.04
PML39YML107C SEC72P39742 193 aaKnown RBP2.33□□□□□ -2.04
PML39YML107C MGA1P53050 456 aa2.33□□□□□ -2.04
PML39YML107C ASI3P53983 676 aa2.33□□□□□ -2.04
PML39YML107C KRE28Q04431 385 aa2.33□□□□□ -2.04
PML39YML107C YMR226CQ05016 267 aaKnown RBP2.33□□□□□ -2.04
PML39YML107C GPM2Q12008 311 aa2.33□□□□□ -2.04
PML39YML107C NCB2Q92317 146 aa2.33□□□□□ -2.04
PML39YML107C TY3B-IQ7LHG5 1498 aaKnown RBP2.33□□□□□ -2.04
PML39YML107C HTB1P02293 131 aaKnown RBP2.32□□□□□ -2.04
PML39YML107C HTB2P02294 131 aa2.32□□□□□ -2.04
PML39YML107C YBR121C-AP0C5L4 52 aa2.32□□□□□ -2.04
PML39YML107C PRX1P34227 261 aaKnown RBP2.32□□□□□ -2.04
PML39YML107C JEN1P36035 616 aa2.32□□□□□ -2.04
PML39YML107C MRX3P38172 270 aa2.32□□□□□ -2.04
PML39YML107C YBR096WP38256 230 aa2.32□□□□□ -2.04
PML39YML107C YKE4P40544 346 aa2.32□□□□□ -2.04
PML39YML107C YDR124WQ04608 324 aa2.32□□□□□ -2.04
PML39YML107C YOR283WQ12040 230 aaKnown RBP2.32□□□□□ -2.04
PML39YML107C SAS5Q99314 248 aa2.32□□□□□ -2.04
PML39YML107C YCR102CP25608 368 aa2.31□□□□□ -2.04
PML39YML107C MEI4P29467 408 aa2.31□□□□□ -2.04
PML39YML107C SMB1P40018 196 aaKnown RBP2.31□□□□□ -2.04
PML39YML107C TIF34P40217 347 aaKnown RBP2.31□□□□□ -2.04
PML39YML107C POG1P40473 351 aa2.31□□□□□ -2.04
PML39YML107C YGL159WP53110 370 aa2.31□□□□□ -2.04
PML39YML107C MRPL50P53724 139 aa2.31□□□□□ -2.04
PML39YML107C YNL140CP53910 189 aa2.31□□□□□ -2.04
PML39YML107C CTF19Q02732 369 aa2.31□□□□□ -2.04
PML39YML107C GOT1Q03554 138 aa2.31□□□□□ -2.04
PML39YML107C PEX12Q04370 399 aa2.31□□□□□ -2.04
PML39YML107C YPR098CQ06089 161 aa2.31□□□□□ -2.04
PML39YML107C SEC22P22214 214 aa2.3□□□□□ -2.04
PML39YML107C SCO1P23833 295 aa2.3□□□□□ -2.04
PML39YML107C NTF2P33331 125 aaKnown RBP2.3□□□□□ -2.04
PML39YML107C SGE1P33335 543 aa2.3□□□□□ -2.04
PML39YML107C FZO1P38297 855 aa2.3□□□□□ -2.04
PML39YML107C YIL001WP40560 513 aa2.3□□□□□ -2.04
PML39YML107C MRPL49P40858 161 aaPredicted RBP2.3□□□□□ -2.04
PML39YML107C YRB1P41920 201 aaKnown RBP2.3□□□□□ -2.04
PML39YML107C ALG13P53178 202 aa2.3□□□□□ -2.04
PML39YML107C GET1P53192 235 aa2.3□□□□□ -2.04
PML39YML107C COS6P53344 381 aa2.3□□□□□ -2.04
PML39YML107C YDC1Q02896 317 aa2.3□□□□□ -2.04
PML39YML107C RRP17Q04031 235 aaPredicted RBP2.3□□□□□ -2.04
PML39YML107C YLR179CQ06252 201 aaKnown RBP2.3□□□□□ -2.04
PML39YML107C RRS1Q08746 203 aaKnown RBP2.3□□□□□ -2.04
PML39YML107C BBP1Q12365 385 aa2.3□□□□□ -2.04
PML39YML107C YLR419WQ06698 1435 aaKnown RBP2.3□□□□□ -2.04
PML39YML107C TUS1Q06412 1307 aa2.29□□□□□ -2.04
PML39YML107C YKR104WP0CE69 306 aa2.29□□□□□ -2.04
PML39YML107C FBA1P14540 359 aaKnown RBP2.29□□□□□ -2.04
PML39YML107C RNA15P25299 296 aaPredicted RBP2.29□□□□□ -2.04
PML39YML107C RCN1P36054 211 aa2.29□□□□□ -2.04
PML39YML107C MRPL39P36533 70 aa2.29□□□□□ -2.04
PML39YML107C FES1P38260 290 aa2.29□□□□□ -2.04
PML39YML107C SNZ3P43545 298 aa2.29□□□□□ -2.04
PML39YML107C OST2P46964 130 aa2.29□□□□□ -2.04
PML39YML107C TMA22P47089 198 aaPredicted RBP2.29□□□□□ -2.04
PML39YML107C YJR079WP47126 109 aa2.29□□□□□ -2.04
PML39YML107C USE1P53146 245 aa2.29□□□□□ -2.04
PML39YML107C CAB4P53332 305 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 117.9 ms