RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C MRPL49P40858 161 aaPredicted RBP4.17□□□□□ -1.74
ATG17YLR423C YNL010WP53981 241 aaKnown RBP4.17□□□□□ -1.74
ATG17YLR423C SNZ1Q03148 297 aa4.17□□□□□ -1.74
ATG17YLR423C GPM2Q12008 311 aa4.17□□□□□ -1.74
ATG17YLR423C YHR214C-EQ8TGK0 99 aa4.17□□□□□ -1.74
ATG17YLR423C CDC8P00572 216 aa4.16□□□□□ -1.74
ATG17YLR423C UTR5P32630 166 aa4.16□□□□□ -1.74
ATG17YLR423C MSW1P04803 379 aa4.15□□□□□ -1.75
ATG17YLR423C ASF2P32448 525 aaPredicted RBP4.15□□□□□ -1.75
ATG17YLR423C SMD3P43321 101 aaKnown RBP4.15□□□□□ -1.75
ATG17YLR423C LSM7P53905 115 aaKnown RBP4.15□□□□□ -1.75
ATG17YLR423C SEC4P07560 215 aaKnown RBP4.14□□□□□ -1.75
ATG17YLR423C TCA17P32613 152 aa4.14□□□□□ -1.75
ATG17YLR423C CLB6P32943 380 aa4.14□□□□□ -1.75
ATG17YLR423C AIM25P47140 327 aa4.14□□□□□ -1.75
ATG17YLR423C DIA1P54005 336 aa4.14□□□□□ -1.75
ATG17YLR423C PRM15Q03262 622 aa4.14□□□□□ -1.75
ATG17YLR423C CDC7P06243 507 aa4.13□□□□□ -1.75
ATG17YLR423C PUT1P09368 476 aa4.13□□□□□ -1.75
ATG17YLR423C ADE1P27616 306 aa4.13□□□□□ -1.75
ATG17YLR423C CTR2P38865 189 aa4.13□□□□□ -1.75
ATG17YLR423C MNN5P46982 586 aa4.13□□□□□ -1.75
ATG17YLR423C PET191Q02772 108 aa4.13□□□□□ -1.75
ATG17YLR423C VPS68Q12016 184 aa4.13□□□□□ -1.75
ATG17YLR423C SWR1Q05471 1514 aa4.12□□□□□ -1.75
ATG17YLR423C YLR156WP0CE96 114 aa4.12□□□□□ -1.75
ATG17YLR423C YLR159WP0CE97 114 aa4.12□□□□□ -1.75
ATG17YLR423C YLR161WP0CE98 114 aa4.12□□□□□ -1.75
ATG17YLR423C COS6P53344 381 aa4.12□□□□□ -1.75
ATG17YLR423C YOL160WQ08321 113 aa4.12□□□□□ -1.75
ATG17YLR423C YPL162CQ12042 273 aa4.12□□□□□ -1.75
ATG17YLR423C ATO3Q12359 275 aa4.12□□□□□ -1.75
ATG17YLR423C PSF1Q12488 208 aa4.12□□□□□ -1.75
ATG17YLR423C GRX2P17695 143 aaKnown RBP4.11□□□□□ -1.75
ATG17YLR423C SCO1P23833 295 aa4.11□□□□□ -1.75
ATG17YLR423C ATP7P30902 174 aa4.11□□□□□ -1.75
ATG17YLR423C YGR050CP53231 118 aa4.1□□□□□ -1.75
ATG17YLR423C KSS1P14681 368 aa4.09□□□□□ -1.75
ATG17YLR423C MAG1P22134 296 aaKnown RBP4.09□□□□□ -1.75
ATG17YLR423C CAF4P36130 643 aa4.09□□□□□ -1.75
ATG17YLR423C HMF1P40037 129 aaKnown RBP4.09□□□□□ -1.75
ATG17YLR423C YGR219WP53307 113 aa4.09□□□□□ -1.75
ATG17YLR423C TRM12Q04235 462 aa4.09□□□□□ -1.75
ATG17YLR423C SPA2P23201 1466 aaKnown RBP4.09□□□□□ -1.75
ATG17YLR423C REP2P03872 296 aa4.08□□□□□ -1.76
ATG17YLR423C CIS3P47001 227 aa4.08□□□□□ -1.76
ATG17YLR423C NEJ1Q06148 342 aa4.08□□□□□ -1.76
ATG17YLR423C YNG1Q08465 219 aa4.08□□□□□ -1.76
ATG17YLR423C EMC6Q12431 108 aa4.08□□□□□ -1.76
ATG17YLR423C SEC72P39742 193 aaKnown RBP4.07□□□□□ -1.76
ATG17YLR423C AIF1P52923 378 aa4.07□□□□□ -1.76
ATG17YLR423C COG5P53951 403 aa4.07□□□□□ -1.76
ATG17YLR423C ARR2Q06597 130 aa4.07□□□□□ -1.76
ATG17YLR423C IGO2Q9P305 131 aa4.07□□□□□ -1.76
ATG17YLR423C SIR2P06700 562 aa4.06□□□□□ -1.76
ATG17YLR423C MRS1P07266 363 aa4.06□□□□□ -1.76
ATG17YLR423C UTP30P36144 274 aaKnown RBP4.06□□□□□ -1.76
ATG17YLR423C RGM1Q00453 211 aa4.06□□□□□ -1.76
ATG17YLR423C IKI3Q06706 1349 aaKnown RBP4.05□□□□□ -1.76
ATG17YLR423C MRPS28P21771 286 aa4.05□□□□□ -1.76
ATG17YLR423C BET1P22804 142 aa4.05□□□□□ -1.76
ATG17YLR423C RTC4P53850 401 aa4.05□□□□□ -1.76
ATG17YLR423C TSC3Q3E790 80 aa4.05□□□□□ -1.76
ATG17YLR423C YFR032C-BQ8TGU2 87 aa4.05□□□□□ -1.76
ATG17YLR423C SEC17P32602 292 aa4.04□□□□□ -1.76
ATG17YLR423C SWP1Q02795 286 aa4.04□□□□□ -1.76
ATG17YLR423C YET3Q07451 203 aa4.04□□□□□ -1.76
ATG17YLR423C URA5P13298 226 aaKnown RBP4.03□□□□□ -1.76
ATG17YLR423C MDH3P32419 343 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
ATG17YLR423C YOR062CP36025 268 aa4.03□□□□□ -1.76
ATG17YLR423C SHG1P38337 142 aa4.03□□□□□ -1.76
ATG17YLR423C YHR180WP38868 163 aa4.03□□□□□ -1.76
ATG17YLR423C PGD1P40356 397 aa4.03□□□□□ -1.76
ATG17YLR423C FUS2Q05670 677 aa4.03□□□□□ -1.76
ATG17YLR423C MCP1Q12106 302 aa4.03□□□□□ -1.76
ATG17YLR423C FKS1P38631 1876 aaKnown RBP4.03□□□□□ -1.77
ATG17YLR423C CKS1P20486 150 aaKnown RBP4.02□□□□□ -1.77
ATG17YLR423C GLE2P40066 365 aa4.02□□□□□ -1.77
ATG17YLR423C PDS1P40316 373 aaPredicted RBP4.02□□□□□ -1.77
ATG17YLR423C YDR249CQ03787 373 aa4.02□□□□□ -1.77
ATG17YLR423C USB1Q12208 290 aaKnown RBP4.02□□□□□ -1.77
ATG17YLR423C EGD2P38879 174 aaKnown RBP4.01□□□□□ -1.77
ATG17YLR423C PRM10P42946 383 aa4.01□□□□□ -1.77
ATG17YLR423C MRPS8Q03799 155 aa4.01□□□□□ -1.77
ATG17YLR423C SPG3Q04398 127 aaPredicted RBP4.01□□□□□ -1.77
ATG17YLR423C NOC4Q06512 552 aaPredicted RBP4.01□□□□□ -1.77
ATG17YLR423C YLR036CQ07986 203 aa4.01□□□□□ -1.77
ATG17YLR423C TIM9O74700 87 aa4□□□□□ -1.77
ATG17YLR423C RPB3P16370 318 aaKnown RBP4□□□□□ -1.77
ATG17YLR423C PEX4P29340 183 aa4□□□□□ -1.77
ATG17YLR423C TRX3P25372 127 aa3.99□□□□□ -1.77
ATG17YLR423C TAH1P25638 111 aaPredicted RBP3.99□□□□□ -1.77
ATG17YLR423C ERV15P38312 142 aa3.99□□□□□ -1.77
ATG17YLR423C RPL33BP41056 107 aaKnown RBP3.99□□□□□ -1.77
ATG17YLR423C GGA1Q06336 557 aa3.99□□□□□ -1.77
ATG17YLR423C YOL024WQ08172 172 aa3.99□□□□□ -1.77
ATG17YLR423C FBA1P14540 359 aaKnown RBP3.98□□□□□ -1.77
ATG17YLR423C SNF6P18888 332 aa3.98□□□□□ -1.77
ATG17YLR423C MRPL17P36528 281 aa3.98□□□□□ -1.77
ATG17YLR423C YER034WP40022 185 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms