RNA–Protein interactions for RNA: YLR410W-A

YLR410W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YLR410W-A, Length 1,317 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR410W-AYLR410W-A LIA1P47120 325 aaKnown RBP1.56□□□□□ -2.16
YLR410W-AYLR410W-A YNR077CP53758 84 aa1.56□□□□□ -2.16
YLR410W-AYLR410W-A FYV6P53913 173 aa1.56□□□□□ -2.16
YLR410W-AYLR410W-A ANT1Q06497 328 aa1.56□□□□□ -2.16
YLR410W-AYLR410W-A TUS1Q06412 1307 aa1.56□□□□□ -2.16
YLR410W-AYLR410W-A MATALPHA1P0CY06 175 aa1.55□□□□□ -2.16
YLR410W-AYLR410W-A HMLALPHA1P0CY07 175 aa1.55□□□□□ -2.16
YLR410W-AYLR410W-A SNC2P33328 115 aa1.55□□□□□ -2.16
YLR410W-AYLR410W-A RPC17P47076 161 aa1.55□□□□□ -2.16
YLR410W-AYLR410W-A SWP1Q02795 286 aa1.55□□□□□ -2.16
YLR410W-AYLR410W-A TFC1P32367 649 aa1.54□□□□□ -2.16
YLR410W-AYLR410W-A TCD1P38756 429 aa1.54□□□□□ -2.16
YLR410W-AYLR410W-A CDC123Q05791 360 aa1.54□□□□□ -2.16
YLR410W-AYLR410W-A PDR18P53756 1333 aa1.54□□□□□ -2.16
YLR410W-AYLR410W-A CDC28P00546 298 aaKnown RBP1.53□□□□□ -2.16
YLR410W-AYLR410W-A MRPL17P36528 281 aa1.53□□□□□ -2.16
YLR410W-AYLR410W-A EAF6P47128 113 aa1.53□□□□□ -2.16
YLR410W-AYLR410W-A GAS3Q03655 524 aa1.53□□□□□ -2.16
YLR410W-AYLR410W-A TDA8Q6B2U8 126 aa1.53□□□□□ -2.16
YLR410W-AYLR410W-A SRY1P36007 326 aa1.52□□□□□ -2.17
YLR410W-AYLR410W-A TVP38P36164 337 aa1.52□□□□□ -2.17
YLR410W-AYLR410W-A ERJ5P43613 295 aaPredicted RBP1.52□□□□□ -2.17
YLR410W-AYLR410W-A BXI1P48558 297 aa1.52□□□□□ -2.17
YLR410W-AYLR410W-A MPA43P53583 542 aaPredicted RBP1.52□□□□□ -2.17
YLR410W-AYLR410W-A NOP13P53883 403 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
YLR410W-AYLR410W-A MIC26P50087 233 aa1.51□□□□□ -2.17
YLR410W-AYLR410W-A BRR6P53062 197 aa1.51□□□□□ -2.17
YLR410W-AYLR410W-A YDL180WQ12301 547 aa1.51□□□□□ -2.17
YLR410W-AYLR410W-A TIM9O74700 87 aa1.5□□□□□ -2.17
YLR410W-AYLR410W-A CPA1P07258 411 aaKnown RBP1.5□□□□□ -2.17
YLR410W-AYLR410W-A APS1P35181 156 aa1.5□□□□□ -2.17
YLR410W-AYLR410W-A YBR209WP38311 105 aa1.5□□□□□ -2.17
YLR410W-AYLR410W-A FAR7P43592 221 aa1.5□□□□□ -2.17
YLR410W-AYLR410W-A YIL177CP40434 1758 aa1.49□□□□□ -2.17
YLR410W-AYLR410W-A YJL225CP40889 1758 aa1.49□□□□□ -2.17
YLR410W-AYLR410W-A RHO1P06780 209 aaKnown RBP1.49□□□□□ -2.17
YLR410W-AYLR410W-A RPL24BP24000 155 aaKnown RBP1.49□□□□□ -2.17
YLR410W-AYLR410W-A VMA6P32366 345 aaKnown RBP1.49□□□□□ -2.17
YLR410W-AYLR410W-A GVP36P40531 326 aaKnown RBP1.49□□□□□ -2.17
YLR410W-AYLR410W-A VAR1P02381 398 aa1.48□□□□□ -2.17
YLR410W-AYLR410W-A RPL28P02406 149 aaKnown RBP1.48□□□□□ -2.17
YLR410W-AYLR410W-A DBF2P22204 572 aa1.48□□□□□ -2.17
YLR410W-AYLR410W-A MIC12P38341 106 aa1.48□□□□□ -2.17
YLR410W-AYLR410W-A YER076CP40049 302 aa1.48□□□□□ -2.17
YLR410W-AYLR410W-A ALG13P53178 202 aa1.48□□□□□ -2.17
YLR410W-AYLR410W-A UBC7Q02159 165 aa1.48□□□□□ -2.17
YLR410W-AYLR410W-A GPM2Q12008 311 aa1.48□□□□□ -2.17
YLR410W-AYLR410W-A FSF1Q12029 327 aaKnown RBP1.48□□□□□ -2.17
YLR410W-AYLR410W-A YMR31P19955 123 aa1.47□□□□□ -2.17
YLR410W-AYLR410W-A PPA2P28239 310 aa1.47□□□□□ -2.17
YLR410W-AYLR410W-A MSB2P32334 1306 aa1.47□□□□□ -2.17
YLR410W-AYLR410W-A AST2P39945 430 aaKnown RBP1.47□□□□□ -2.17
YLR410W-AYLR410W-A RMD6P39975 231 aa1.47□□□□□ -2.17
YLR410W-AYLR410W-A YER085CP40058 173 aa1.47□□□□□ -2.17
YLR410W-AYLR410W-A CUS2P53830 285 aaPredicted RBP1.47□□□□□ -2.17
YLR410W-AYLR410W-A THP2O13539 261 aaKnown RBP1.46□□□□□ -2.18
YLR410W-AYLR410W-A RIO2P40160 425 aaKnown RBP1.46□□□□□ -2.18
YLR410W-AYLR410W-A KNH1P50112 268 aa1.46□□□□□ -2.18
YLR410W-AYLR410W-A POP3P53833 195 aaPredicted RBP1.46□□□□□ -2.18
YLR410W-AYLR410W-A MCP1Q12106 302 aa1.46□□□□□ -2.18
YLR410W-AYLR410W-A ATG40Q99325 256 aa1.46□□□□□ -2.18
YLR410W-AYLR410W-A YBR285WP38354 144 aa1.45□□□□□ -2.18
YLR410W-AYLR410W-A NUP57P48837 541 aa1.45□□□□□ -2.18
YLR410W-AYLR410W-A YNL146C-AQ3E7Z1 64 aa1.45□□□□□ -2.18
YLR410W-AYLR410W-A URA5P13298 226 aaKnown RBP1.44□□□□□ -2.18
YLR410W-AYLR410W-A BET1P22804 142 aa1.43□□□□□ -2.18
YLR410W-AYLR410W-A SEC17P32602 292 aa1.43□□□□□ -2.18
YLR410W-AYLR410W-A TCA17P32613 152 aa1.43□□□□□ -2.18
YLR410W-AYLR410W-A PTM1P32857 523 aa1.43□□□□□ -2.18
YLR410W-AYLR410W-A SHE2P36068 246 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
YLR410W-AYLR410W-A YLR236CA0A023PZG4 107 aa1.42□□□□□ -2.18
YLR410W-AYLR410W-A KSS1P14681 368 aa1.42□□□□□ -2.18
YLR410W-AYLR410W-A UTP30P36144 274 aaKnown RBP1.42□□□□□ -2.18
YLR410W-AYLR410W-A YDR274CP87283 123 aa1.42□□□□□ -2.18
YLR410W-AYLR410W-A CUE4Q04201 117 aaPredicted RBP1.42□□□□□ -2.18
YLR410W-AYLR410W-A BMH2P34730 273 aaKnown RBP1.41□□□□□ -2.18
YLR410W-AYLR410W-A JLP1Q12358 412 aa1.41□□□□□ -2.18
YLR410W-AYLR410W-A ACC1Q00955 2233 aaKnown RBP1.41□□□□□ -2.18
YLR410W-AYLR410W-A YBR121C-AP0C5L4 52 aa1.4□□□□□ -2.18
YLR410W-AYLR410W-A IDH1P28834 360 aaKnown RBP RIP-Chip data1.4□□□□□ -2.18not detected
YLR410W-AYLR410W-A OPY1P38271 328 aa1.4□□□□□ -2.18
YLR410W-AYLR410W-A YHR214C-EQ8TGK0 99 aa1.4□□□□□ -2.18
YLR410W-AYLR410W-A SEY1Q99287 776 aa1.4□□□□□ -2.18
YLR410W-AYLR410W-A SIR2P06700 562 aa1.4□□□□□ -2.19
YLR410W-AYLR410W-A GCN3P14741 305 aa1.4□□□□□ -2.19
YLR410W-AYLR410W-A MGM101P32787 269 aaKnown RBP1.4□□□□□ -2.19
YLR410W-AYLR410W-A RTR1P40084 226 aaPredicted RBP1.4□□□□□ -2.19
YLR410W-AYLR410W-A YRB1P41920 201 aaKnown RBP1.4□□□□□ -2.19
YLR410W-AYLR410W-A ADO1P47143 340 aaKnown RBP1.4□□□□□ -2.19
YLR410W-AYLR410W-A YDR249CQ03787 373 aa1.4□□□□□ -2.19
YLR410W-AYLR410W-A RAD28Q12021 506 aa1.4□□□□□ -2.19
YLR410W-AYLR410W-A NHP6BP11633 99 aaKnown RBP1.39□□□□□ -2.19
YLR410W-AYLR410W-A RCE1Q03530 315 aa1.39□□□□□ -2.19
YLR410W-AYLR410W-A YHR007C-AQ07074 71 aa1.39□□□□□ -2.19
YLR410W-AYLR410W-A RPL25P04456 142 aaKnown RBP1.38□□□□□ -2.19
YLR410W-AYLR410W-A SEC11P15367 167 aa1.38□□□□□ -2.19
YLR410W-AYLR410W-A SIP3P38717 1229 aa1.38□□□□□ -2.19
YLR410W-AYLR410W-A RTC3P38804 111 aaPredicted RBP1.38□□□□□ -2.19
YLR410W-AYLR410W-A RPL37AP49166 88 aaKnown RBP1.38□□□□□ -2.19
YLR410W-AYLR410W-A YGR050CP53231 118 aa1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms