RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YNR062CP53748 327 aa1.15□□□□□ -2.23
SGD1YLR336C CYT2Q00873 224 aa1.15□□□□□ -2.23
SGD1YLR336C RPB4P20433 221 aaPredicted RBP1.15□□□□□ -2.23
SGD1YLR336C NTG1P31378 399 aa1.15□□□□□ -2.23
SGD1YLR336C YKT6P36015 200 aaKnown RBP1.15□□□□□ -2.23
SGD1YLR336C YHR022CP38763 256 aa1.15□□□□□ -2.23
SGD1YLR336C AYR1P40471 297 aa1.15□□□□□ -2.23
SGD1YLR336C YKE4P40544 346 aa1.15□□□□□ -2.23
SGD1YLR336C PDR17P53844 350 aa1.15□□□□□ -2.23
SGD1YLR336C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
SGD1YLR336C TUS1Q06412 1307 aa1.14□□□□□ -2.23
SGD1YLR336C DDI2P0CH63 225 aa1.14□□□□□ -2.23
SGD1YLR336C DDI3P0CH64 225 aa1.14□□□□□ -2.23
SGD1YLR336C PET9P18239 318 aaKnown RBP1.14□□□□□ -2.23
SGD1YLR336C ATG22P25568 528 aa1.14□□□□□ -2.23
SGD1YLR336C MEI4P29467 408 aa1.14□□□□□ -2.23
SGD1YLR336C LSM4P40070 187 aaKnown RBP1.14□□□□□ -2.23
SGD1YLR336C IRC18P47056 224 aa1.14□□□□□ -2.23
SGD1YLR336C AIF1P52923 378 aa1.14□□□□□ -2.23
SGD1YLR336C YHR214C-EQ8TGK0 99 aa1.14□□□□□ -2.23
SGD1YLR336C SEC4P07560 215 aaKnown RBP1.14□□□□□ -2.23
SGD1YLR336C GCN3P14741 305 aa1.14□□□□□ -2.23
SGD1YLR336C SEC17P32602 292 aa1.14□□□□□ -2.23
SGD1YLR336C UTP30P36144 274 aaKnown RBP1.14□□□□□ -2.23
SGD1YLR336C POP4P38336 279 aa1.14□□□□□ -2.23
SGD1YLR336C BMT5P40493 336 aa1.14□□□□□ -2.23
SGD1YLR336C YML108WQ03759 105 aa1.14□□□□□ -2.23
SGD1YLR336C BNA7Q04066 261 aa1.14□□□□□ -2.23
SGD1YLR336C MDS3P53094 1487 aa1.14□□□□□ -2.23
SGD1YLR336C RFA3P26755 122 aaKnown RBP1.13□□□□□ -2.23
SGD1YLR336C SPS18P32572 300 aa1.13□□□□□ -2.23
SGD1YLR336C IKI1P38874 309 aa1.13□□□□□ -2.23
SGD1YLR336C BOL1Q3E793 110 aa1.13□□□□□ -2.23
SGD1YLR336C PGD1P40356 397 aa1.13□□□□□ -2.23
SGD1YLR336C SNZ1Q03148 297 aa1.13□□□□□ -2.23
SGD1YLR336C MCP1Q12106 302 aa1.13□□□□□ -2.23
SGD1YLR336C USB1Q12208 290 aaKnown RBP1.13□□□□□ -2.23
SGD1YLR336C YCL012CQ8J0M4 134 aa1.13□□□□□ -2.23
SGD1YLR336C CDC7P06243 507 aa1.12□□□□□ -2.23
SGD1YLR336C YRB2P40517 327 aa1.12□□□□□ -2.23
SGD1YLR336C RPL33BP41056 107 aaKnown RBP1.12□□□□□ -2.23
SGD1YLR336C BAT2P47176 376 aaKnown RBP1.12□□□□□ -2.23
SGD1YLR336C BOL2P53082 120 aa1.12□□□□□ -2.23
SGD1YLR336C YGR050CP53231 118 aa1.12□□□□□ -2.23
SGD1YLR336C SNF2P22082 1703 aa1.12□□□□□ -2.23
SGD1YLR336C RPL27BP0C2H7 136 aaKnown RBP1.12□□□□□ -2.23
SGD1YLR336C MER1P16523 270 aa1.12□□□□□ -2.23
SGD1YLR336C IDH1P28834 360 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
SGD1YLR336C MRPL17P36528 281 aa1.12□□□□□ -2.23
SGD1YLR336C TIR3P40552 269 aa1.12□□□□□ -2.23
SGD1YLR336C ERG25P53045 309 aa1.12□□□□□ -2.23
SGD1YLR336C YNR077CP53758 84 aa1.12□□□□□ -2.23
SGD1YLR336C ADF1Q2V2Q1 113 aa1.12□□□□□ -2.23
SGD1YLR336C YFR032C-BQ8TGU2 87 aa1.12□□□□□ -2.23
SGD1YLR336C PTM1P32857 523 aa1.11□□□□□ -2.23
SGD1YLR336C MRPL28P36527 147 aa1.11□□□□□ -2.23
SGD1YLR336C YCR087C-AP37263 153 aa1.11□□□□□ -2.23
SGD1YLR336C DSE2P38844 325 aa1.11□□□□□ -2.23
SGD1YLR336C PEP8P40335 379 aa1.11□□□□□ -2.23
SGD1YLR336C ICE2P40499 491 aa1.11□□□□□ -2.23
SGD1YLR336C AGE2P40529 298 aa1.11□□□□□ -2.23
SGD1YLR336C CUS2P53830 285 aaPredicted RBP1.11□□□□□ -2.23
SGD1YLR336C SWP1Q02795 286 aa1.11□□□□□ -2.23
SGD1YLR336C YOL160WQ08321 113 aa1.11□□□□□ -2.23
SGD1YLR336C YPL162CQ12042 273 aa1.11□□□□□ -2.23
SGD1YLR336C YRA1Q12159 226 aaKnown RBP1.11□□□□□ -2.23
SGD1YLR336C TIM9O74700 87 aa1.11□□□□□ -2.23
SGD1YLR336C HTB1P02293 131 aaKnown RBP1.11□□□□□ -2.23
SGD1YLR336C HTB2P02294 131 aa1.11□□□□□ -2.23
SGD1YLR336C CBF1P17106 351 aa1.11□□□□□ -2.23
SGD1YLR336C MGM101P32787 269 aaKnown RBP1.11□□□□□ -2.23
SGD1YLR336C DOC1P53068 250 aa1.11□□□□□ -2.23
SGD1YLR336C YFR054CP43622 192 aa1.1□□□□□ -2.23
SGD1YLR336C YDR249CQ03787 373 aa1.1□□□□□ -2.23
SGD1YLR336C TSC3Q3E790 80 aa1.1□□□□□ -2.23
SGD1YLR336C JIP3O13555 125 aa1.1□□□□□ -2.23
SGD1YLR336C MATALPHA2P0CY08 210 aa1.1□□□□□ -2.23
SGD1YLR336C HMLALPHA2P0CY09 210 aa1.1□□□□□ -2.23
SGD1YLR336C SVP26P38869 228 aa1.1□□□□□ -2.23
SGD1YLR336C AST2P39945 430 aaKnown RBP1.1□□□□□ -2.23
SGD1YLR336C RMD6P39975 231 aa1.1□□□□□ -2.23
SGD1YLR336C LSM7P53905 115 aaKnown RBP1.1□□□□□ -2.23
SGD1YLR336C CWC21Q03375 135 aaKnown RBP1.1□□□□□ -2.23
SGD1YLR336C SML1Q04964 104 aa1.1□□□□□ -2.23
SGD1YLR336C YNG1Q08465 219 aa1.1□□□□□ -2.23
SGD1YLR336C KSS1P14681 368 aa1.09□□□□□ -2.23
SGD1YLR336C RFC4P40339 323 aaKnown RBP1.09□□□□□ -2.23
SGD1YLR336C PDR18P53756 1333 aa1.09□□□□□ -2.23
SGD1YLR336C MRPS28P21771 286 aa1.09□□□□□ -2.23
SGD1YLR336C MDH2P22133 377 aa1.09□□□□□ -2.23
SGD1YLR336C SKG1P36169 355 aa1.09□□□□□ -2.23
SGD1YLR336C UMP1P38293 148 aa1.09□□□□□ -2.23
SGD1YLR336C EAF6P47128 113 aa1.09□□□□□ -2.23
SGD1YLR336C NOP19P53317 196 aaPredicted RBP1.09□□□□□ -2.23
SGD1YLR336C COG5P53951 403 aa1.09□□□□□ -2.23
SGD1YLR336C GGA1Q06336 557 aa1.09□□□□□ -2.23
SGD1YLR336C YIL177CP40434 1758 aa1.09□□□□□ -2.24
SGD1YLR336C YJL225CP40889 1758 aa1.09□□□□□ -2.24
SGD1YLR336C YBR219CP38317 127 aa1.09□□□□□ -2.24
SGD1YLR336C YNL217WP40152 326 aa1.09□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms