RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeastyeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP2YLR335W PAU20Q08322 120 aa3.9□□□□□ -1.78
NUP2YLR335W PAU9Q3E770 120 aa3.9□□□□□ -1.78
NUP2YLR335W TDH3P00359 332 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
NUP2YLR335W CDC36P06100 191 aaPredicted RBP3.9□□□□□ -1.79
NUP2YLR335W SNF5P18480 905 aa3.9□□□□□ -1.79
NUP2YLR335W VMA3P25515 160 aa3.9□□□□□ -1.79
NUP2YLR335W YKL075CP36083 450 aa3.9□□□□□ -1.79
NUP2YLR335W PBP1P53297 722 aaKnown RBP3.9□□□□□ -1.79
NUP2YLR335W ALG12P53730 551 aa3.9□□□□□ -1.79
NUP2YLR335W APS2Q00381 147 aa3.9□□□□□ -1.79
NUP2YLR335W GIS1Q03833 894 aa3.9□□□□□ -1.79
NUP2YLR335W YDR387CQ04162 555 aa3.9□□□□□ -1.79
NUP2YLR335W PIN3Q06449 215 aa3.9□□□□□ -1.79
NUP2YLR335W YDL242WQ07746 117 aa3.9□□□□□ -1.79
NUP2YLR335W PAM18Q07914 168 aa3.9□□□□□ -1.79
NUP2YLR335W PAR32Q12515 295 aaKnown RBP3.9□□□□□ -1.79
NUP2YLR335W YDL085C-AQ3E7B7 68 aaKnown RBP3.9□□□□□ -1.79
NUP2YLR335W RPS14AP06367 137 aaKnown RBP3.89□□□□□ -1.79
NUP2YLR335W GLC7P32598 312 aaKnown RBP3.89□□□□□ -1.79
NUP2YLR335W RPS14BP39516 138 aaKnown RBP3.89□□□□□ -1.79
NUP2YLR335W ATG27P46989 271 aa3.89□□□□□ -1.79
NUP2YLR335W MSO1P53604 210 aaKnown RBP3.89□□□□□ -1.79
NUP2YLR335W HHT1P61830 136 aa3.89□□□□□ -1.79
NUP2YLR335W RSM23Q01163 450 aa3.89□□□□□ -1.79
NUP2YLR335W YMR210WQ03649 449 aa3.89□□□□□ -1.79
NUP2YLR335W YLR030WQ07967 263 aa3.89□□□□□ -1.79
NUP2YLR335W YOR352WQ08816 343 aa3.89□□□□□ -1.79
NUP2YLR335W NIP7Q08962 181 aaKnown RBP3.89□□□□□ -1.79
NUP2YLR335W SME1Q12330 94 aaPredicted RBP3.89□□□□□ -1.79
NUP2YLR335W RAX2Q12465 1220 aa3.89□□□□□ -1.79
NUP2YLR335W YNR034W-AQ3E841 98 aa3.89□□□□□ -1.79
NUP2YLR335W TAD3Q9URQ3 322 aa3.89□□□□□ -1.79
NUP2YLR335W ARF1P11076 181 aaKnown RBP3.89□□□□□ -1.79
NUP2YLR335W DAT1P13483 248 aaKnown RBP3.89□□□□□ -1.79
NUP2YLR335W SEC62P21825 274 aa3.89□□□□□ -1.79
NUP2YLR335W SCO1P23833 295 aa3.89□□□□□ -1.79
NUP2YLR335W PEX4P29340 183 aa3.89□□□□□ -1.79
NUP2YLR335W UPS2P35200 230 aa3.89□□□□□ -1.79
NUP2YLR335W PTC7P38797 343 aa3.89□□□□□ -1.79
NUP2YLR335W PRM5P40476 318 aa3.89□□□□□ -1.79
NUP2YLR335W YNR048WP53740 393 aa3.89□□□□□ -1.79
NUP2YLR335W TEX1P53851 422 aaKnown RBP3.89□□□□□ -1.79
NUP2YLR335W SAE3P89114 91 aa3.89□□□□□ -1.79
NUP2YLR335W PRP11Q07350 266 aaPredicted RBP3.89□□□□□ -1.79
NUP2YLR335W PRR2Q12310 699 aa3.89□□□□□ -1.79
NUP2YLR335W TRP4P07285 380 aaPredicted RBP3.88□□□□□ -1.79
NUP2YLR335W ERV1P27882 189 aa3.88□□□□□ -1.79
NUP2YLR335W ERG2P32352 222 aa3.88□□□□□ -1.79
NUP2YLR335W RML2P32611 393 aa3.88□□□□□ -1.79
NUP2YLR335W YUH1P35127 236 aa3.88□□□□□ -1.79
NUP2YLR335W RPS27AP35997 82 aaKnown RBP3.88□□□□□ -1.79
NUP2YLR335W SHB17P36136 271 aaKnown RBP3.88□□□□□ -1.79
NUP2YLR335W RPS27BP38711 82 aa3.88□□□□□ -1.79
NUP2YLR335W BAT1P38891 393 aaKnown RBP3.88□□□□□ -1.79
NUP2YLR335W FLO5P38894 1075 aa3.88□□□□□ -1.79
NUP2YLR335W NOP16P40007 231 aaKnown RBP3.88□□□□□ -1.79
NUP2YLR335W NSA2P40078 261 aaKnown RBP3.88□□□□□ -1.79
NUP2YLR335W RTS2P40962 232 aa3.88□□□□□ -1.79
NUP2YLR335W OYE3P41816 400 aaPredicted RBP3.88□□□□□ -1.79
NUP2YLR335W RIB4P50861 169 aaPredicted RBP3.88□□□□□ -1.79
NUP2YLR335W YVH1Q02256 364 aaKnown RBP3.88□□□□□ -1.79
NUP2YLR335W COQ11Q05892 277 aa3.88□□□□□ -1.79
NUP2YLR335W DIC1Q06143 298 aa3.88□□□□□ -1.79
NUP2YLR335W TMA10Q06177 86 aa3.88□□□□□ -1.79
NUP2YLR335W ARR2Q06597 130 aa3.88□□□□□ -1.79
NUP2YLR335W YPL264CQ08980 353 aa3.88□□□□□ -1.79
NUP2YLR335W USB1Q12208 290 aaKnown RBP3.88□□□□□ -1.79
NUP2YLR335W FRE8Q12209 686 aa3.88□□□□□ -1.79
NUP2YLR335W YPR108W-AQ3E7B3 70 aa3.88□□□□□ -1.79
NUP2YLR335W COA2Q3E823 68 aa3.88□□□□□ -1.79
NUP2YLR335W MES1P00958 751 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W RPL31AP0C2H8 113 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W RPL31BP0C2H9 113 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W QCR9P22289 66 aa3.87□□□□□ -1.79
NUP2YLR335W ATG15P25641 520 aa3.87□□□□□ -1.79
NUP2YLR335W AGA2P32781 87 aa3.87□□□□□ -1.79
NUP2YLR335W SWD2P36104 329 aaPredicted RBP3.87□□□□□ -1.79
NUP2YLR335W RPL14AP36105 138 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W ARC40P38328 384 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W RPL14BP38754 138 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W CCS1P40202 249 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W YFR054CP43622 192 aa3.87□□□□□ -1.79
NUP2YLR335W CTK2P46962 323 aa3.87□□□□□ -1.79
NUP2YLR335W OST3P48439 350 aa3.87□□□□□ -1.79
NUP2YLR335W YNR061CP53747 219 aa3.87□□□□□ -1.79
NUP2YLR335W PDR17P53844 350 aa3.87□□□□□ -1.79
NUP2YLR335W SWS2P53937 143 aa3.87□□□□□ -1.79
NUP2YLR335W HRI1Q05905 244 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W CTS2Q06350 511 aa3.87□□□□□ -1.79
NUP2YLR335W GRE1Q08969 168 aa3.87□□□□□ -1.79
NUP2YLR335W ATG5Q12380 294 aa3.87□□□□□ -1.79
NUP2YLR335W YIL134C-AQ45U18 67 aa3.87□□□□□ -1.79
NUP2YLR335W YCL001W-BQ96VH2 84 aa3.87□□□□□ -1.79
NUP2YLR335W RPP2BP02400 110 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W ILV5P06168 395 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W RPL30P14120 105 aaKnown RBP3.87□□□□□ -1.79
NUP2YLR335W IMG1P25626 169 aa3.87□□□□□ -1.79
NUP2YLR335W AHT1P29589 182 aa3.87□□□□□ -1.79
NUP2YLR335W OCH1P31755 480 aa3.87□□□□□ -1.79
NUP2YLR335W AFR1P33304 620 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 91.9 ms