RNA–Protein interactions for RNA: YKL161C

KDX1, Transcript of Protein kinase, yeast

Gene KDX1, Length 1,302 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KDX1	YKL161C	FUS2	Q05670	677 aa		4.65	□□□□□ -1.67
KDX1	YKL161C	SIR2	P06700	562 aa		4.64	□□□□□ -1.67
KDX1	YKL161C	YHR032W-A	P0C5N6	59 aa		4.64	□□□□□ -1.67
KDX1	YKL161C	TRR1	P29509	319 aa	Known RBP	4.64	□□□□□ -1.67
KDX1	YKL161C	RSM25	P40496	264 aa		4.64	□□□□□ -1.67
KDX1	YKL161C	PIR5	P46999	287 aa		4.64	□□□□□ -1.67
KDX1	YKL161C	YOL024W	Q08172	172 aa		4.64	□□□□□ -1.67
KDX1	YKL161C	RPL9A	P05738	191 aa	Known RBP	4.63	□□□□□ -1.67
KDX1	YKL161C	SEC4	P07560	215 aa	Known RBP	4.63	□□□□□ -1.67
KDX1	YKL161C	PUT1	P09368	476 aa		4.63	□□□□□ -1.67
KDX1	YKL161C	MAG1	P22134	296 aa	Known RBP	4.63	□□□□□ -1.67
KDX1	YKL161C	RPL9B	P51401	191 aa	Known RBP	4.63	□□□□□ -1.67
KDX1	YKL161C	YGL088W	P53151	121 aa		4.63	□□□□□ -1.67
KDX1	YKL161C	YNL010W	P53981	241 aa	Known RBP	4.63	□□□□□ -1.67
KDX1	YKL161C	YOR268C	Q08734	132 aa		4.63	□□□□□ -1.67
KDX1	YKL161C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.63	□□□□□ -1.67
KDX1	YKL161C	YPR096C	O13587	100 aa		4.62	□□□□□ -1.67
KDX1	YKL161C	TIF34	P40217	347 aa	Known RBP	4.62	□□□□□ -1.67
KDX1	YKL161C	NRK1	P53915	240 aa		4.62	□□□□□ -1.67
KDX1	YKL161C	GRX8	Q05926	109 aa		4.62	□□□□□ -1.67
KDX1	YKL161C	FEX1	Q08913	375 aa		4.62	□□□□□ -1.67
KDX1	YKL161C	FEX2	Q08991	375 aa		4.62	□□□□□ -1.67
KDX1	YKL161C	YPL162C	Q12042	273 aa		4.62	□□□□□ -1.67
KDX1	YKL161C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
KDX1	YKL161C	TCA17	P32613	152 aa		4.61	□□□□□ -1.67
KDX1	YKL161C	GLE2	P40066	365 aa		4.61	□□□□□ -1.67
KDX1	YKL161C	YGR050C	P53231	118 aa		4.61	□□□□□ -1.67
KDX1	YKL161C	SSU72	P53538	206 aa	Predicted RBP	4.61	□□□□□ -1.67
KDX1	YKL161C	YIP3	P53633	176 aa		4.61	□□□□□ -1.67
KDX1	YKL161C	COG5	P53951	403 aa		4.61	□□□□□ -1.67
KDX1	YKL161C	USB1	Q12208	290 aa	Known RBP	4.61	□□□□□ -1.67
KDX1	YKL161C	IKI3	Q06706	1349 aa	Known RBP	4.6	□□□□□ -1.67
KDX1	YKL161C	CDC8	P00572	216 aa		4.6	□□□□□ -1.67
KDX1	YKL161C	NOP1	P15646	327 aa	Known RBP	4.6	□□□□□ -1.67
KDX1	YKL161C	KRE1	P17260	313 aa		4.6	□□□□□ -1.67
KDX1	YKL161C	CCA1	P21269	546 aa		4.6	□□□□□ -1.67
KDX1	YKL161C	AGA2	P32781	87 aa		4.6	□□□□□ -1.67
KDX1	YKL161C	PRM7	Q12459	698 aa		4.6	□□□□□ -1.67
KDX1	YKL161C	MHT1	Q12525	324 aa		4.6	□□□□□ -1.67
KDX1	YKL161C	YLR156W	P0CE96	114 aa		4.59	□□□□□ -1.67
KDX1	YKL161C	YLR159W	P0CE97	114 aa		4.59	□□□□□ -1.67
KDX1	YKL161C	YLR161W	P0CE98	114 aa		4.59	□□□□□ -1.67
KDX1	YKL161C	AKR2	Q12013	749 aa		4.59	□□□□□ -1.67
KDX1	YKL161C	RPL35A	P0CX84	120 aa	Known RBP	4.58	□□□□□ -1.68
KDX1	YKL161C	RPL35B	P0CX85	120 aa	Known RBP	4.58	□□□□□ -1.68
KDX1	YKL161C	CKS1	P20486	150 aa	Known RBP	4.58	□□□□□ -1.68
KDX1	YKL161C	AIM2	P39721	246 aa		4.58	□□□□□ -1.68
KDX1	YKL161C	YER084W	P40057	128 aa		4.58	□□□□□ -1.68
KDX1	YKL161C	DSK2	P48510	373 aa		4.58	□□□□□ -1.68
KDX1	YKL161C	YDL012C	Q12489	107 aa		4.58	□□□□□ -1.68
KDX1	YKL161C	SNF4	P12904	322 aa		4.57	□□□□□ -1.68
KDX1	YKL161C	BET1	P22804	142 aa		4.57	□□□□□ -1.68
KDX1	YKL161C	MIG1	P27705	504 aa		4.57	□□□□□ -1.68
KDX1	YKL161C	EFM5	P53200	248 aa	Known RBP	4.57	□□□□□ -1.68
KDX1	YKL161C	SMD2	Q06217	110 aa	Known RBP	4.57	□□□□□ -1.68
KDX1	YKL161C	GGA1	Q06336	557 aa		4.57	□□□□□ -1.68
KDX1	YKL161C	SUE1	Q06524	206 aa		4.57	□□□□□ -1.68
KDX1	YKL161C	MSW1	P04803	379 aa		4.56	□□□□□ -1.68
KDX1	YKL161C	URA5	P13298	226 aa	Known RBP	4.56	□□□□□ -1.68
KDX1	YKL161C	DPM1	P14020	267 aa	Known RBP	4.56	□□□□□ -1.68
KDX1	YKL161C	YFR032C-B	Q8TGU2	87 aa		4.56	□□□□□ -1.68
KDX1	YKL161C	MBF1	O14467	151 aa	Known RBP	4.55	□□□□□ -1.68
KDX1	YKL161C	YHL026C	P38740	315 aa		4.55	□□□□□ -1.68
KDX1	YKL161C	ARO80	Q04052	950 aa		4.55	□□□□□ -1.68
KDX1	YKL161C	RDS3	Q06835	107 aa	Predicted RBP	4.55	□□□□□ -1.68
KDX1	YKL161C	RIO1	Q12196	484 aa	Known RBP	4.55	□□□□□ -1.68
KDX1	YKL161C	PSF1	Q12488	208 aa		4.55	□□□□□ -1.68
KDX1	YKL161C	QCR2	P07257	368 aa		4.54	□□□□□ -1.68
KDX1	YKL161C	RPS24A	P0CX31	135 aa	Known RBP	4.54	□□□□□ -1.68
KDX1	YKL161C	RPS24B	P0CX32	135 aa	Known RBP	4.54	□□□□□ -1.68
KDX1	YKL161C	MRPS28	P21771	286 aa		4.54	□□□□□ -1.68
KDX1	YKL161C	MGT1	P26188	188 aa		4.54	□□□□□ -1.68
KDX1	YKL161C	YNL184C	P53876	108 aa		4.54	□□□□□ -1.68
KDX1	YKL161C	YLR460C	P54007	376 aa		4.54	□□□□□ -1.68
KDX1	YKL161C	SCM4	P32564	187 aa		4.53	□□□□□ -1.68
KDX1	YKL161C	SNX4	P47057	423 aa		4.53	□□□□□ -1.68
KDX1	YKL161C	SEC14	P24280	304 aa	Known RBP	4.52	□□□□□ -1.69
KDX1	YKL161C	UTP30	P36144	274 aa	Known RBP	4.52	□□□□□ -1.69
KDX1	YKL161C	MNN5	P46982	586 aa		4.52	□□□□□ -1.69
KDX1	YKL161C	YLR031W	Q07978	186 aa		4.52	□□□□□ -1.69
KDX1	YKL161C	TSC3	Q3E790	80 aa		4.52	□□□□□ -1.69
KDX1	YKL161C	REP2	P03872	296 aa		4.51	□□□□□ -1.69
KDX1	YKL161C	AIM34	Q03673	198 aa		4.51	□□□□□ -1.69
KDX1	YKL161C	ATO3	Q12359	275 aa		4.51	□□□□□ -1.69
KDX1	YKL161C	PEX11	Q12462	236 aa		4.51	□□□□□ -1.69
KDX1	YKL161C	FKS1	P38631	1876 aa	Known RBP	4.51	□□□□□ -1.69
KDX1	YKL161C	RPB3	P16370	318 aa	Known RBP	4.5	□□□□□ -1.69
KDX1	YKL161C	FMP32	P43557	207 aa		4.5	□□□□□ -1.69
KDX1	YKL161C	AIF1	P52923	378 aa		4.5	□□□□□ -1.69
KDX1	YKL161C	APJ1	P53940	528 aa		4.5	□□□□□ -1.69
KDX1	YKL161C	HNT1	Q04344	158 aa	Known RBP	4.5	□□□□□ -1.69
KDX1	YKL161C	BRX1	Q08235	291 aa	Known RBP	4.5	□□□□□ -1.69
KDX1	YKL161C	YIL177C	P40434	1758 aa		4.5	□□□□□ -1.69
KDX1	YKL161C	YJL225C	P40889	1758 aa		4.5	□□□□□ -1.69
KDX1	YKL161C	YJL144W	P47009	104 aa		4.49	□□□□□ -1.69
KDX1	YKL161C	YNL140C	P53910	189 aa		4.49	□□□□□ -1.69
KDX1	YKL161C	SLM2	P53955	656 aa		4.49	□□□□□ -1.69
KDX1	YKL161C	SWP1	Q02795	286 aa		4.49	□□□□□ -1.69
KDX1	YKL161C	YDR249C	Q03787	373 aa		4.49	□□□□□ -1.69
KDX1	YKL161C	PLP1	Q04004	230 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 81.1 ms