RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C SNZ1Q03148 297 aa1.95□□□□□ -2.1
CCE1YKL011C GAS3Q03655 524 aa1.95□□□□□ -2.1
CCE1YKL011C SPG3Q04398 127 aaPredicted RBP1.95□□□□□ -2.1
CCE1YKL011C BOL1Q3E793 110 aa1.95□□□□□ -2.1
CCE1YKL011C GCN3P14741 305 aa1.94□□□□□ -2.1
CCE1YKL011C IDH1P28834 360 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
CCE1YKL011C TCA17P32613 152 aa1.94□□□□□ -2.1
CCE1YKL011C TAF14P35189 244 aa1.94□□□□□ -2.1
CCE1YKL011C SIP3P38717 1229 aa1.94□□□□□ -2.1
CCE1YKL011C AYR1P40471 297 aa1.94□□□□□ -2.1
CCE1YKL011C YNR062CP53748 327 aa1.94□□□□□ -2.1
CCE1YKL011C PET9P18239 318 aaKnown RBP1.93□□□□□ -2.1
CCE1YKL011C MEI4P29467 408 aa1.93□□□□□ -2.1
CCE1YKL011C IKI1P38874 309 aa1.93□□□□□ -2.1
CCE1YKL011C PGD1P40356 397 aa1.93□□□□□ -2.1
CCE1YKL011C BMT5P40493 336 aa1.93□□□□□ -2.1
CCE1YKL011C CWC21Q03375 135 aaKnown RBP1.93□□□□□ -2.1
CCE1YKL011C USB1Q12208 290 aaKnown RBP1.93□□□□□ -2.1
CCE1YKL011C TUS1Q06412 1307 aa1.92□□□□□ -2.1
CCE1YKL011C DDI2P0CH63 225 aa1.92□□□□□ -2.1
CCE1YKL011C DDI3P0CH64 225 aa1.92□□□□□ -2.1
CCE1YKL011C SPS18P32572 300 aa1.92□□□□□ -2.1
CCE1YKL011C MGM101P32787 269 aaKnown RBP1.92□□□□□ -2.1
CCE1YKL011C MRPL28P36527 147 aa1.92□□□□□ -2.1
CCE1YKL011C LSM4P40070 187 aaKnown RBP1.92□□□□□ -2.1
CCE1YKL011C RPL33BP41056 107 aaKnown RBP1.92□□□□□ -2.1
CCE1YKL011C PET191Q02772 108 aa1.92□□□□□ -2.1
CCE1YKL011C YRA1Q12159 226 aaKnown RBP1.92□□□□□ -2.1
CCE1YKL011C YHR214C-EQ8TGK0 99 aa1.92□□□□□ -2.1
CCE1YKL011C HTB1P02293 131 aaKnown RBP1.91□□□□□ -2.1
CCE1YKL011C HTB2P02294 131 aa1.91□□□□□ -2.1
CCE1YKL011C SEC4P07560 215 aaKnown RBP1.91□□□□□ -2.1
CCE1YKL011C RFA3P26755 122 aaKnown RBP1.91□□□□□ -2.1
CCE1YKL011C SEC17P32602 292 aa1.91□□□□□ -2.1
CCE1YKL011C UTP30P36144 274 aaKnown RBP1.91□□□□□ -2.1
CCE1YKL011C SKG1P36169 355 aa1.91□□□□□ -2.1
CCE1YKL011C RMD6P39975 231 aa1.91□□□□□ -2.1
CCE1YKL011C BAT2P47176 376 aaKnown RBP1.91□□□□□ -2.1
CCE1YKL011C GRX3Q03835 250 aa1.91□□□□□ -2.1
CCE1YKL011C MCP1Q12106 302 aa1.91□□□□□ -2.1
CCE1YKL011C CDC7P06243 507 aa1.9□□□□□ -2.11
CCE1YKL011C MER1P16523 270 aa1.9□□□□□ -2.11
CCE1YKL011C MRPL17P36528 281 aa1.9□□□□□ -2.11
CCE1YKL011C YCR087C-AP37263 153 aa1.9□□□□□ -2.11
CCE1YKL011C DSE2P38844 325 aa1.9□□□□□ -2.11
CCE1YKL011C PEP8P40335 379 aa1.9□□□□□ -2.11
CCE1YKL011C ICE2P40499 491 aa1.9□□□□□ -2.11
CCE1YKL011C AGE2P40529 298 aa1.9□□□□□ -2.11
CCE1YKL011C TIR3P40552 269 aa1.9□□□□□ -2.11
CCE1YKL011C YGR050CP53231 118 aa1.9□□□□□ -2.11
CCE1YKL011C CUS2P53830 285 aaPredicted RBP1.9□□□□□ -2.11
CCE1YKL011C SWP1Q02795 286 aa1.9□□□□□ -2.11
CCE1YKL011C ADF1Q2V2Q1 113 aa1.9□□□□□ -2.11
CCE1YKL011C TIM9O74700 87 aa1.89□□□□□ -2.11
CCE1YKL011C RPL27BP0C2H7 136 aaKnown RBP1.89□□□□□ -2.11
CCE1YKL011C CBF1P17106 351 aa1.89□□□□□ -2.11
CCE1YKL011C MRPS28P21771 286 aa1.89□□□□□ -2.11
CCE1YKL011C PTM1P32857 523 aa1.89□□□□□ -2.11
CCE1YKL011C SVP26P38869 228 aa1.89□□□□□ -2.11
CCE1YKL011C AST2P39945 430 aaKnown RBP1.89□□□□□ -2.11
CCE1YKL011C RFC4P40339 323 aaKnown RBP1.89□□□□□ -2.11
CCE1YKL011C YFR054CP43622 192 aa1.89□□□□□ -2.11
CCE1YKL011C YMR226CQ05016 267 aaKnown RBP1.89□□□□□ -2.11
CCE1YKL011C YPL162CQ12042 273 aa1.89□□□□□ -2.11
CCE1YKL011C MATALPHA2P0CY08 210 aa1.88□□□□□ -2.11
CCE1YKL011C HMLALPHA2P0CY09 210 aa1.88□□□□□ -2.11
CCE1YKL011C MDH2P22133 377 aa1.88□□□□□ -2.11
CCE1YKL011C TRM5P38793 499 aa1.88□□□□□ -2.11
CCE1YKL011C VTC1P40046 129 aaRIP-Chip data1.88□□□□□ -2.11not detected
CCE1YKL011C YRB2P40517 327 aa1.88□□□□□ -2.11
CCE1YKL011C BOL2P53082 120 aa1.88□□□□□ -2.11
CCE1YKL011C CGR1P53188 120 aa1.88□□□□□ -2.11
CCE1YKL011C LSM7P53905 115 aaKnown RBP1.88□□□□□ -2.11
CCE1YKL011C TSC3Q3E790 80 aa1.88□□□□□ -2.11
CCE1YKL011C RPL25P04456 142 aaKnown RBP1.87□□□□□ -2.11
CCE1YKL011C KSS1P14681 368 aa1.87□□□□□ -2.11
CCE1YKL011C UMP1P38293 148 aa1.87□□□□□ -2.11
CCE1YKL011C DOC1P53068 250 aa1.87□□□□□ -2.11
CCE1YKL011C YDR249CQ03787 373 aa1.87□□□□□ -2.11
CCE1YKL011C SML1Q04964 104 aa1.87□□□□□ -2.11
CCE1YKL011C YOL160WQ08321 113 aa1.87□□□□□ -2.11
CCE1YKL011C YCL012CQ8J0M4 134 aa1.87□□□□□ -2.11
CCE1YKL011C YFR032C-BQ8TGU2 87 aa1.87□□□□□ -2.11
CCE1YKL011C YIL177CP40434 1758 aa1.87□□□□□ -2.11
CCE1YKL011C YJL225CP40889 1758 aa1.87□□□□□ -2.11
CCE1YKL011C BET1P22804 142 aa1.86□□□□□ -2.11
CCE1YKL011C YET1P35723 206 aa1.86□□□□□ -2.11
CCE1YKL011C YNL217WP40152 326 aa1.86□□□□□ -2.11
CCE1YKL011C YNR077CP53758 84 aa1.86□□□□□ -2.11
CCE1YKL011C GET4Q12125 312 aa1.86□□□□□ -2.11
CCE1YKL011C MDM32Q12171 622 aa1.86□□□□□ -2.11
CCE1YKL011C URA5P13298 226 aaKnown RBP1.85□□□□□ -2.11
CCE1YKL011C SNC2P33328 115 aa1.85□□□□□ -2.11
CCE1YKL011C GVP36P40531 326 aaKnown RBP1.85□□□□□ -2.11
CCE1YKL011C EAF6P47128 113 aa1.85□□□□□ -2.11
CCE1YKL011C COG5P53951 403 aa1.85□□□□□ -2.11
CCE1YKL011C BUD25P85052 153 aa1.85□□□□□ -2.11
CCE1YKL011C MRPS17Q03246 237 aaPredicted RBP1.85□□□□□ -2.11
CCE1YKL011C JIP3O13555 125 aa1.84□□□□□ -2.11
CCE1YKL011C RPB3P16370 318 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 98.5 ms