RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C YJR146WP47174 117 aa3.55□□□□□ -1.84
YIR043CYIR043C RPL9BP51401 191 aaKnown RBP3.55□□□□□ -1.84
YIR043CYIR043C RPL26BP53221 127 aaKnown RBP3.55□□□□□ -1.84
YIR043CYIR043C DIA1P54005 336 aa3.55□□□□□ -1.84
YIR043CYIR043C SUE1Q06524 206 aa3.55□□□□□ -1.84
YIR043CYIR043C CDC8P00572 216 aa3.54□□□□□ -1.84
YIR043CYIR043C SEC72P39742 193 aaKnown RBP3.54□□□□□ -1.84
YIR043CYIR043C AST2P39945 430 aaKnown RBP3.54□□□□□ -1.84
YIR043CYIR043C RSM25P40496 264 aa3.54□□□□□ -1.84
YIR043CYIR043C SNX4P47057 423 aa3.54□□□□□ -1.84
YIR043CYIR043C YGR050CP53231 118 aa3.54□□□□□ -1.84
YIR043CYIR043C SLM2P53955 656 aa3.54□□□□□ -1.84
YIR043CYIR043C YNG1Q08465 219 aa3.54□□□□□ -1.84
YIR043CYIR043C YLR156WP0CE96 114 aa3.53□□□□□ -1.84
YIR043CYIR043C YLR159WP0CE97 114 aa3.53□□□□□ -1.84
YIR043CYIR043C YLR161WP0CE98 114 aa3.53□□□□□ -1.84
YIR043CYIR043C SCM4P32564 187 aa3.53□□□□□ -1.84
YIR043CYIR043C SKG1P36169 355 aa3.53□□□□□ -1.84
YIR043CYIR043C MIX17Q03667 156 aa3.53□□□□□ -1.84
YIR043CYIR043C HRT1Q08273 121 aa3.53□□□□□ -1.84
YIR043CYIR043C GRE1Q08969 168 aa3.53□□□□□ -1.84
YIR043CYIR043C MHT1Q12525 324 aa3.53□□□□□ -1.84
YIR043CYIR043C APJ1P53940 528 aa3.52□□□□□ -1.85
YIR043CYIR043C TRM12Q04235 462 aa3.52□□□□□ -1.85
YIR043CYIR043C YPL162CQ12042 273 aa3.52□□□□□ -1.85
YIR043CYIR043C USB1Q12208 290 aaKnown RBP3.52□□□□□ -1.85
YIR043CYIR043C PSF1Q12488 208 aa3.52□□□□□ -1.85
YIR043CYIR043C YIL177CP40434 1758 aa3.51□□□□□ -1.85
YIR043CYIR043C YJL225CP40889 1758 aa3.51□□□□□ -1.85
YIR043CYIR043C MSW1P04803 379 aa3.51□□□□□ -1.85
YIR043CYIR043C MRS1P07266 363 aa3.51□□□□□ -1.85
YIR043CYIR043C PUT1P09368 476 aa3.51□□□□□ -1.85
YIR043CYIR043C CAF4P36130 643 aa3.51□□□□□ -1.85
YIR043CYIR043C UTP30P36144 274 aaKnown RBP3.51□□□□□ -1.85
YIR043CYIR043C MED6P38782 295 aa3.51□□□□□ -1.85
YIR043CYIR043C MRPL49P40858 161 aaPredicted RBP3.51□□□□□ -1.85
YIR043CYIR043C COG5P53951 403 aa3.51□□□□□ -1.85
YIR043CYIR043C KSS1P14681 368 aa3.5□□□□□ -1.85
YIR043CYIR043C GRX2P17695 143 aaKnown RBP3.5□□□□□ -1.85
YIR043CYIR043C SCO1P23833 295 aa3.5□□□□□ -1.85
YIR043CYIR043C EGD2P38879 174 aaKnown RBP3.5□□□□□ -1.85
YIR043CYIR043C MNN5P46982 586 aa3.5□□□□□ -1.85
YIR043CYIR043C YFR032C-BQ8TGU2 87 aa3.5□□□□□ -1.85
YIR043CYIR043C REP2P03872 296 aa3.49□□□□□ -1.85
YIR043CYIR043C SIR2P06700 562 aa3.49□□□□□ -1.85
YIR043CYIR043C MAG1P22134 296 aaKnown RBP3.49□□□□□ -1.85
YIR043CYIR043C SEC17P32602 292 aa3.49□□□□□ -1.85
YIR043CYIR043C SHG1P38337 142 aa3.49□□□□□ -1.85
YIR043CYIR043C HMF1P40037 129 aaKnown RBP3.49□□□□□ -1.85
YIR043CYIR043C VPS68Q12016 184 aa3.49□□□□□ -1.85
YIR043CYIR043C IGO2Q9P305 131 aa3.49□□□□□ -1.85
YIR043CYIR043C IKI3Q06706 1349 aaKnown RBP3.48□□□□□ -1.85
YIR043CYIR043C RTC4P53850 401 aa3.48□□□□□ -1.85
YIR043CYIR043C SNO1Q03144 224 aa3.48□□□□□ -1.85
YIR043CYIR043C GGA1Q06336 557 aa3.48□□□□□ -1.85
YIR043CYIR043C NOC4Q06512 552 aaPredicted RBP3.48□□□□□ -1.85
YIR043CYIR043C SNF6P18888 332 aa3.47□□□□□ -1.85
YIR043CYIR043C TAH1P25638 111 aaPredicted RBP3.47□□□□□ -1.85
YIR043CYIR043C CLB6P32943 380 aa3.47□□□□□ -1.85
YIR043CYIR043C ERG10P41338 398 aaKnown RBP3.47□□□□□ -1.85
YIR043CYIR043C COS6P53344 381 aa3.47□□□□□ -1.85
YIR043CYIR043C ARR2Q06597 130 aa3.47□□□□□ -1.85
YIR043CYIR043C YET3Q07451 203 aa3.47□□□□□ -1.85
YIR043CYIR043C ATO3Q12359 275 aa3.47□□□□□ -1.85
YIR043CYIR043C FBA1P14540 359 aaKnown RBP3.46□□□□□ -1.86
YIR043CYIR043C UTR5P32630 166 aa3.46□□□□□ -1.86
YIR043CYIR043C PDS1P40316 373 aaPredicted RBP3.46□□□□□ -1.86
YIR043CYIR043C AIF1P52923 378 aa3.46□□□□□ -1.86
YIR043CYIR043C YDR249CQ03787 373 aa3.46□□□□□ -1.86
YIR043CYIR043C GRX8Q05926 109 aa3.46□□□□□ -1.86
YIR043CYIR043C MCP1Q12106 302 aa3.46□□□□□ -1.86
YIR043CYIR043C BET1P22804 142 aa3.45□□□□□ -1.86
YIR043CYIR043C RME1P32338 300 aaKnown RBP3.45□□□□□ -1.86
YIR043CYIR043C POG1P40473 351 aa3.45□□□□□ -1.86
YIR043CYIR043C NRK1P53915 240 aa3.45□□□□□ -1.86
YIR043CYIR043C PRM15Q03262 622 aa3.45□□□□□ -1.86
YIR043CYIR043C ARO80Q04052 950 aa3.45□□□□□ -1.86
YIR043CYIR043C SPG3Q04398 127 aaPredicted RBP3.45□□□□□ -1.86
YIR043CYIR043C GIM5Q04493 163 aa3.45□□□□□ -1.86
YIR043CYIR043C NEJ1Q06148 342 aa3.45□□□□□ -1.86
YIR043CYIR043C YOL024WQ08172 172 aa3.45□□□□□ -1.86
YIR043CYIR043C URA5P13298 226 aaKnown RBP3.44□□□□□ -1.86
YIR043CYIR043C TRX3P25372 127 aa3.44□□□□□ -1.86
YIR043CYIR043C YHR180WP38868 163 aa3.44□□□□□ -1.86
YIR043CYIR043C GLE2P40066 365 aa3.44□□□□□ -1.86
YIR043CYIR043C YGR219WP53307 113 aa3.44□□□□□ -1.86
YIR043CYIR043C SWP1Q02795 286 aa3.44□□□□□ -1.86
YIR043CYIR043C YLR036CQ07986 203 aa3.44□□□□□ -1.86
YIR043CYIR043C CMC2Q3E7A4 109 aa3.44□□□□□ -1.86
YIR043CYIR043C MBF1O14467 151 aaKnown RBP3.43□□□□□ -1.86
YIR043CYIR043C TIM9O74700 87 aa3.43□□□□□ -1.86
YIR043CYIR043C RPB3P16370 318 aaKnown RBP3.43□□□□□ -1.86
YIR043CYIR043C MRPS28P21771 286 aa3.43□□□□□ -1.86
YIR043CYIR043C RAD51P25454 400 aa3.43□□□□□ -1.86
YIR043CYIR043C PRM10P42946 383 aa3.43□□□□□ -1.86
YIR043CYIR043C YNL184CP53876 108 aa3.43□□□□□ -1.86
YIR043CYIR043C TSC3Q3E790 80 aa3.43□□□□□ -1.86
YIR043CYIR043C GCY1P14065 312 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
YIR043CYIR043C SRP14P38985 146 aa3.42□□□□□ -1.86
YIR043CYIR043C CIS3P47001 227 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms