RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W FMT1P32785 401 aa8.29□□□□□ -1.08
UBA4YHR111W UTP30P36144 274 aaKnown RBP8.29□□□□□ -1.08
UBA4YHR111W MRPL27P36526 146 aaPredicted RBP8.29□□□□□ -1.08
UBA4YHR111W GIM3P53900 129 aa8.29□□□□□ -1.08
UBA4YHR111W STD1Q02794 444 aa8.29□□□□□ -1.08
UBA4YHR111W TSA2Q04120 196 aa8.29□□□□□ -1.08
UBA4YHR111W FCY1Q12178 158 aa8.29□□□□□ -1.08
UBA4YHR111W MED4Q12343 284 aa8.29□□□□□ -1.08
UBA4YHR111W YPR108W-AQ3E7B3 70 aa8.29□□□□□ -1.08
UBA4YHR111W UBA3Q99344 299 aa8.29□□□□□ -1.08
UBA4YHR111W ADE8P04161 214 aa8.28□□□□□ -1.08
UBA4YHR111W GAL1P04385 528 aa8.28□□□□□ -1.08
UBA4YHR111W DIT1P21623 536 aa8.28□□□□□ -1.08
UBA4YHR111W LSB5P25369 354 aa8.28□□□□□ -1.08
UBA4YHR111W ERG2P32352 222 aa8.28□□□□□ -1.08
UBA4YHR111W COQ2P32378 372 aa8.28□□□□□ -1.08
UBA4YHR111W MRP20P32387 263 aa8.28□□□□□ -1.08
UBA4YHR111W ECM31P38122 312 aa8.28□□□□□ -1.08
UBA4YHR111W CUE1P38428 203 aa8.28□□□□□ -1.08
UBA4YHR111W IKI1P38874 309 aa8.28□□□□□ -1.08
UBA4YHR111W YJL118WP47022 219 aa8.28□□□□□ -1.08
UBA4YHR111W CWC25P53854 179 aaKnown RBP8.28□□□□□ -1.08
UBA4YHR111W YNL234WP53857 426 aa8.28□□□□□ -1.08
UBA4YHR111W MRPL22P53881 309 aa8.28□□□□□ -1.08
UBA4YHR111W HOF1Q05080 669 aa8.28□□□□□ -1.08
UBA4YHR111W YPD1Q07688 167 aa8.28□□□□□ -1.08
UBA4YHR111W YOR292CQ08743 309 aa8.28□□□□□ -1.08
UBA4YHR111W PET20Q99373 253 aa8.28□□□□□ -1.08
UBA4YHR111W HEM13P11353 328 aaKnown RBP8.27□□□□□ -1.09
UBA4YHR111W TOM40P23644 387 aaKnown RBP8.27□□□□□ -1.09
UBA4YHR111W YCR041WP37265 110 aa8.27□□□□□ -1.09
UBA4YHR111W PSD1P39006 500 aa8.27□□□□□ -1.09
UBA4YHR111W RSM27P53305 110 aa8.27□□□□□ -1.09
UBA4YHR111W TY1A-DR2Q03964 440 aaKnown RBP8.27□□□□□ -1.09
UBA4YHR111W DAL4Q04895 635 aa8.27□□□□□ -1.09
UBA4YHR111W ASM4Q05166 528 aa8.27□□□□□ -1.09
UBA4YHR111W HTZ1Q12692 134 aaKnown RBP8.27□□□□□ -1.09
UBA4YHR111W YOS1Q3E834 85 aa8.27□□□□□ -1.09
UBA4YHR111W CYC1P00044 109 aaPredicted RBP8.26□□□□□ -1.09
UBA4YHR111W SPT14P32363 452 aa8.26□□□□□ -1.09
UBA4YHR111W YNK1P36010 153 aaKnown RBP8.26□□□□□ -1.09
UBA4YHR111W PCL7P40186 285 aa8.26□□□□□ -1.09
UBA4YHR111W TAX4P47030 604 aa8.26□□□□□ -1.09
UBA4YHR111W AIM25P47140 327 aa8.26□□□□□ -1.09
UBA4YHR111W PUS4P48567 403 aaKnown RBP8.26□□□□□ -1.09
UBA4YHR111W YDL186WP48568 277 aa8.26□□□□□ -1.09
UBA4YHR111W YIP1P53039 248 aa8.26□□□□□ -1.09
UBA4YHR111W YGR151CP53287 111 aa8.26□□□□□ -1.09
UBA4YHR111W NGL2Q03264 515 aaKnown RBP8.26□□□□□ -1.09
UBA4YHR111W LPP1Q04396 274 aa8.26□□□□□ -1.09
UBA4YHR111W YCR061WP25639 631 aa8.25□□□□□ -1.09
UBA4YHR111W SPS18P32572 300 aa8.25□□□□□ -1.09
UBA4YHR111W NOP16P40007 231 aaKnown RBP8.25□□□□□ -1.09
UBA4YHR111W LSM7P53905 115 aaKnown RBP8.25□□□□□ -1.09
UBA4YHR111W SYM1Q06563 197 aa8.25□□□□□ -1.09
UBA4YHR111W YOR385WQ08909 290 aa8.25□□□□□ -1.09
UBA4YHR111W RAD52P06778 471 aaKnown RBP8.24□□□□□ -1.09
UBA4YHR111W MIR1P23641 311 aaKnown RBP8.24□□□□□ -1.09
UBA4YHR111W TRR1P29509 319 aaKnown RBP8.24□□□□□ -1.09
UBA4YHR111W PRY2P36110 329 aa8.24□□□□□ -1.09
UBA4YHR111W FLO10P36170 1169 aa8.24□□□□□ -1.09
UBA4YHR111W POP2P39008 433 aa8.24□□□□□ -1.09
UBA4YHR111W YFL054CP43549 646 aa8.24□□□□□ -1.09
UBA4YHR111W RPA34P47006 233 aaPredicted RBP8.24□□□□□ -1.09
UBA4YHR111W IMD3P50095 523 aaKnown RBP8.24□□□□□ -1.09
UBA4YHR111W TPN1P53099 579 aa8.24□□□□□ -1.09
UBA4YHR111W HUG1Q6Q5K6 68 aa8.24□□□□□ -1.09
UBA4YHR111W GPM1P00950 247 aaKnown RBP8.23□□□□□ -1.09
UBA4YHR111W YER190C-BP0CX94 160 aa8.23□□□□□ -1.09
UBA4YHR111W YEL077W-AP0CX95 160 aa8.23□□□□□ -1.09
UBA4YHR111W YGR296C-BP0CX96 160 aa8.23□□□□□ -1.09
UBA4YHR111W YPL283W-BP0CX97 160 aa8.23□□□□□ -1.09
UBA4YHR111W YPR204C-AP0CX98 160 aa8.23□□□□□ -1.09
UBA4YHR111W YFL068WP0CX99 160 aa8.23□□□□□ -1.09
UBA4YHR111W YLL066W-AP0CY00 160 aa8.23□□□□□ -1.09
UBA4YHR111W YLL067W-AP0CY01 160 aa8.23□□□□□ -1.09
UBA4YHR111W CDC23P16522 626 aa8.23□□□□□ -1.09
UBA4YHR111W CPR4P25334 318 aa8.23□□□□□ -1.09
UBA4YHR111W HYM1P32464 399 aa8.23□□□□□ -1.09
UBA4YHR111W ICS2P38284 255 aa8.23□□□□□ -1.09
UBA4YHR111W LSM1P47017 172 aaKnown RBP8.23□□□□□ -1.09
UBA4YHR111W NRG1Q03125 231 aa8.23□□□□□ -1.09
UBA4YHR111W YFH1Q07540 174 aa8.23□□□□□ -1.09
UBA4YHR111W SCP1Q08873 200 aa8.23□□□□□ -1.09
UBA4YHR111W YGR035W-AQ45U48 73 aa8.23□□□□□ -1.09
UBA4YHR111W ROX3P25046 220 aa8.22□□□□□ -1.09
UBA4YHR111W YCP4P25349 247 aaKnown RBP8.22□□□□□ -1.09
UBA4YHR111W VMA8P32610 256 aaKnown RBP8.22□□□□□ -1.09
UBA4YHR111W MEH1Q02205 184 aa8.22□□□□□ -1.09
UBA4YHR111W JID1Q12350 301 aa8.22□□□□□ -1.09
UBA4YHR111W RPL9AP05738 191 aaKnown RBP8.21□□□□□ -1.1
UBA4YHR111W CAP2P13517 287 aa8.21□□□□□ -1.1
UBA4YHR111W FEN2P25621 512 aaKnown RBP8.21□□□□□ -1.1
UBA4YHR111W RAD23P32628 398 aaKnown RBP8.21□□□□□ -1.1
UBA4YHR111W PAN3P36102 679 aaPredicted RBP8.21□□□□□ -1.1
UBA4YHR111W POP8P38208 133 aa8.21□□□□□ -1.1
UBA4YHR111W AIM20P40451 204 aa8.21□□□□□ -1.1
UBA4YHR111W MSE1P48525 536 aa8.21□□□□□ -1.1
UBA4YHR111W RPL9BP51401 191 aaKnown RBP8.21□□□□□ -1.1
UBA4YHR111W PHO92Q06390 306 aa8.21□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 81.4 ms