RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C TFC7Q12415 435 aa3.17□□□□□ -1.9
PDX1YGR193C RPL13AQ12690 199 aaPredicted RBP3.17□□□□□ -1.9
PDX1YGR193C SCC2Q04002 1493 aa3.16□□□□□ -1.9
PDX1YGR193C SIN3P22579 1536 aa3.16□□□□□ -1.9
PDX1YGR193C OPI3P05375 206 aa3.16□□□□□ -1.9
PDX1YGR193C RPL9AP05738 191 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C RAD52P06778 471 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C SGA1P08019 549 aa3.16□□□□□ -1.9
PDX1YGR193C RPL2AP0CX45 254 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C RPL2BP0CX46 254 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C SPT15P13393 240 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C BGL2P15703 313 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C RPB5P20434 215 aa3.16□□□□□ -1.9
PDX1YGR193C YCR007CP25354 239 aa3.16□□□□□ -1.9
PDX1YGR193C FMT1P32785 401 aa3.16□□□□□ -1.9
PDX1YGR193C SHB17P36136 271 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C RPL14BP38754 138 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C ISC1P40015 477 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C YER079WP40052 210 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C PRE5P40302 234 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C YPL073CP40323 161 aa3.16□□□□□ -1.9
PDX1YGR193C SAS2P40963 338 aa3.16□□□□□ -1.9
PDX1YGR193C EGT2P42835 1041 aa3.16□□□□□ -1.9
PDX1YGR193C SNO3P43544 222 aa3.16□□□□□ -1.9
PDX1YGR193C GON7P46984 123 aa3.16□□□□□ -1.9
PDX1YGR193C LCB3P47013 409 aa3.16□□□□□ -1.9
PDX1YGR193C RPL9BP51401 191 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C UBC12P52491 188 aa3.16□□□□□ -1.9
PDX1YGR193C SBH1P52870 82 aa3.16□□□□□ -1.9
PDX1YGR193C YGL230CP53074 147 aa3.16□□□□□ -1.9
PDX1YGR193C YGL039WP53183 348 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C ERG26P53199 349 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C ATP23P53722 227 aa3.16□□□□□ -1.9
PDX1YGR193C DUG3P53871 357 aa3.16□□□□□ -1.9
PDX1YGR193C CRZ1P53968 678 aa3.16□□□□□ -1.9
PDX1YGR193C LSM3P57743 89 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C INP1Q03694 420 aa3.16□□□□□ -1.9
PDX1YGR193C YMR317WQ04893 1140 aa3.16□□□□□ -1.9
PDX1YGR193C YPR098CQ06089 161 aa3.16□□□□□ -1.9
PDX1YGR193C SFH1Q06168 426 aa3.16□□□□□ -1.9
PDX1YGR193C ARR3Q06598 404 aa3.16□□□□□ -1.9
PDX1YGR193C BSP1Q06604 576 aa3.16□□□□□ -1.9
PDX1YGR193C USV1Q12132 391 aa3.16□□□□□ -1.9
PDX1YGR193C RDL1Q12305 139 aaKnown RBP3.16□□□□□ -1.9
PDX1YGR193C TY1B-HO13535 1793 aa3.15□□□□□ -1.9
PDX1YGR193C TY1B-PR2P0C2J0 1756 aa3.15□□□□□ -1.9
PDX1YGR193C HSL1P34244 1518 aa3.15□□□□□ -1.9
PDX1YGR193C ATP5P09457 212 aa3.15□□□□□ -1.91
PDX1YGR193C TIR1P10863 254 aa3.15□□□□□ -1.91
PDX1YGR193C SNF4P12904 322 aa3.15□□□□□ -1.91
PDX1YGR193C ATR1P13090 542 aa3.15□□□□□ -1.91
PDX1YGR193C HAP3P13434 144 aa3.15□□□□□ -1.91
PDX1YGR193C FUN14P18411 198 aa3.15□□□□□ -1.91
PDX1YGR193C MBR1P23493 339 aa3.15□□□□□ -1.91
PDX1YGR193C TIP1P27654 210 aaPredicted RBP3.15□□□□□ -1.91
PDX1YGR193C ERG24P32462 438 aaKnown RBP3.15□□□□□ -1.91
PDX1YGR193C TOA2P32774 122 aa3.15□□□□□ -1.91
PDX1YGR193C PTM1P32857 523 aa3.15□□□□□ -1.91
PDX1YGR193C SSS1P35179 80 aa3.15□□□□□ -1.91
PDX1YGR193C ETR1P38071 380 aa3.15□□□□□ -1.91
PDX1YGR193C SDS24P38314 527 aa3.15□□□□□ -1.91
PDX1YGR193C GAA1P39012 614 aa3.15□□□□□ -1.91
PDX1YGR193C YEL075CP39972 122 aa3.15□□□□□ -1.91
PDX1YGR193C SPC25P40014 221 aa3.15□□□□□ -1.91
PDX1YGR193C GET2P40056 285 aa3.15□□□□□ -1.91
PDX1YGR193C RPL13BP40212 199 aaKnown RBP3.15□□□□□ -1.91
PDX1YGR193C DLS1P40366 167 aa3.15□□□□□ -1.91
PDX1YGR193C XBP1P40489 647 aa3.15□□□□□ -1.91
PDX1YGR193C YIL012WP40551 113 aa3.15□□□□□ -1.91
PDX1YGR193C BXI1P48558 297 aa3.15□□□□□ -1.91
PDX1YGR193C YNR048WP53740 393 aa3.15□□□□□ -1.91
PDX1YGR193C OSH6Q02201 448 aa3.15□□□□□ -1.91
PDX1YGR193C YMR099CQ03161 297 aaKnown RBP3.15□□□□□ -1.91
PDX1YGR193C GRH1Q04410 372 aaKnown RBP3.15□□□□□ -1.91
PDX1YGR193C RNH202Q05635 350 aa3.15□□□□□ -1.91
PDX1YGR193C YHC1Q05900 231 aaKnown RBP3.15□□□□□ -1.91
PDX1YGR193C SHH4Q06236 168 aa3.15□□□□□ -1.91
PDX1YGR193C TEN1Q07921 160 aa3.15□□□□□ -1.91
PDX1YGR193C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
PDX1YGR193C YLR042CQ07990 161 aa3.15□□□□□ -1.91
PDX1YGR193C YLR049CQ12110 428 aa3.15□□□□□ -1.91
PDX1YGR193C YLR126CQ12288 251 aa3.15□□□□□ -1.91
PDX1YGR193C UTP23Q12339 254 aaKnown RBP3.15□□□□□ -1.91
PDX1YGR193C BOL1Q3E793 110 aa3.15□□□□□ -1.91
PDX1YGR193C YNL277W-AQ3E7Z0 62 aa3.15□□□□□ -1.91
PDX1YGR193C PEP1P32319 1579 aa3.15□□□□□ -1.91
PDX1YGR193C MON2P48563 1636 aaPredicted RBP3.15□□□□□ -1.91
PDX1YGR193C YCF1P39109 1515 aaKnown RBP3.14□□□□□ -1.91
PDX1YGR193C RPL7AP05737 244 aaKnown RBP3.14□□□□□ -1.91
PDX1YGR193C BAR1P12630 587 aa3.14□□□□□ -1.91
PDX1YGR193C CAP2P13517 287 aa3.14□□□□□ -1.91
PDX1YGR193C MSI1P13712 422 aa3.14□□□□□ -1.91
PDX1YGR193C TFS1P14306 219 aa3.14□□□□□ -1.91
PDX1YGR193C YCR090CP25654 182 aaKnown RBP3.14□□□□□ -1.91
PDX1YGR193C YET1P35723 206 aa3.14□□□□□ -1.91
PDX1YGR193C LSM2P38203 95 aaKnown RBP3.14□□□□□ -1.91
PDX1YGR193C MBA1P38300 278 aa3.14□□□□□ -1.91
PDX1YGR193C RPB11P38902 120 aa3.14□□□□□ -1.91
PDX1YGR193C MST28P39552 234 aa3.14□□□□□ -1.91
PDX1YGR193C HPA3P39979 161 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 106.7 ms