RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA7, Length 357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA7YGR020C SAY1P53324 424 aa1.45□□□□□ -2.18
VMA7YGR020C SWP1Q02795 286 aa1.45□□□□□ -2.18
VMA7YGR020C ANT1Q06497 328 aa1.45□□□□□ -2.18
VMA7YGR020C YPL162CQ12042 273 aa1.45□□□□□ -2.18
VMA7YGR020C TDA8Q6B2U8 126 aa1.45□□□□□ -2.18
VMA7YGR020C PDR18P53756 1333 aa1.44□□□□□ -2.18
VMA7YGR020C UBR2Q07963 1872 aa1.44□□□□□ -2.18
VMA7YGR020C CDC28P00546 298 aaKnown RBP1.44□□□□□ -2.18
VMA7YGR020C SSO1P32867 290 aa1.44□□□□□ -2.18
VMA7YGR020C NOP13P53883 403 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
VMA7YGR020C CDC123Q05791 360 aa1.44□□□□□ -2.18
VMA7YGR020C TSC3Q3E790 80 aa1.44□□□□□ -2.18
VMA7YGR020C SNC2P33328 115 aa1.43□□□□□ -2.18
VMA7YGR020C MRPL17P36528 281 aa1.43□□□□□ -2.18
VMA7YGR020C TCD1P38756 429 aa1.43□□□□□ -2.18
VMA7YGR020C MIC26P50087 233 aa1.43□□□□□ -2.18
VMA7YGR020C GAS3Q03655 524 aa1.43□□□□□ -2.18
VMA7YGR020C TUS1Q06412 1307 aa1.42□□□□□ -2.18
VMA7YGR020C SKG1P36169 355 aa1.42□□□□□ -2.18
VMA7YGR020C BRR6P53062 197 aa1.42□□□□□ -2.18
VMA7YGR020C MPA43P53583 542 aaPredicted RBP1.42□□□□□ -2.18
VMA7YGR020C TIM9O74700 87 aa1.41□□□□□ -2.18
VMA7YGR020C CPA1P07258 411 aaKnown RBP1.41□□□□□ -2.18
VMA7YGR020C TFC1P32367 649 aa1.41□□□□□ -2.18
VMA7YGR020C FAR7P43592 221 aa1.41□□□□□ -2.18
VMA7YGR020C ERJ5P43613 295 aaPredicted RBP1.41□□□□□ -2.18
VMA7YGR020C EAF6P47128 113 aa1.41□□□□□ -2.18
VMA7YGR020C BXI1P48558 297 aa1.41□□□□□ -2.18
VMA7YGR020C ALG13P53178 202 aa1.41□□□□□ -2.18
VMA7YGR020C RHO1P06780 209 aaKnown RBP1.4□□□□□ -2.19
VMA7YGR020C DBF2P22204 572 aa1.4□□□□□ -2.19
VMA7YGR020C VMA6P32366 345 aaKnown RBP1.4□□□□□ -2.19
VMA7YGR020C APS1P35181 156 aa1.4□□□□□ -2.19
VMA7YGR020C YBR209WP38311 105 aa1.4□□□□□ -2.19
VMA7YGR020C YER085CP40058 173 aa1.4□□□□□ -2.19
VMA7YGR020C GVP36P40531 326 aaKnown RBP1.4□□□□□ -2.19
VMA7YGR020C POP3P53833 195 aaPredicted RBP1.4□□□□□ -2.19
VMA7YGR020C FSF1Q12029 327 aaKnown RBP1.4□□□□□ -2.19
VMA7YGR020C MCP1Q12106 302 aa1.4□□□□□ -2.19
VMA7YGR020C THP2O13539 261 aaKnown RBP1.39□□□□□ -2.19
VMA7YGR020C YMR31P19955 123 aa1.39□□□□□ -2.19
VMA7YGR020C RPL24BP24000 155 aaKnown RBP1.39□□□□□ -2.19
VMA7YGR020C SEC17P32602 292 aa1.39□□□□□ -2.19
VMA7YGR020C MIC12P38341 106 aa1.39□□□□□ -2.19
VMA7YGR020C YER076CP40049 302 aa1.39□□□□□ -2.19
VMA7YGR020C UBC7Q02159 165 aa1.39□□□□□ -2.19
VMA7YGR020C GPM2Q12008 311 aa1.39□□□□□ -2.19
VMA7YGR020C TCA17P32613 152 aa1.38□□□□□ -2.19
VMA7YGR020C TVP38P36164 337 aa1.38□□□□□ -2.19
VMA7YGR020C NUP57P48837 541 aa1.38□□□□□ -2.19
VMA7YGR020C KNH1P50112 268 aa1.38□□□□□ -2.19
VMA7YGR020C CUS2P53830 285 aaPredicted RBP1.38□□□□□ -2.19
VMA7YGR020C YDL180WQ12301 547 aa1.38□□□□□ -2.19
VMA7YGR020C VAR1P02381 398 aa1.37□□□□□ -2.19
VMA7YGR020C UTP30P36144 274 aaKnown RBP1.37□□□□□ -2.19
VMA7YGR020C ATG40Q99325 256 aa1.37□□□□□ -2.19
VMA7YGR020C MSB2P32334 1306 aa1.37□□□□□ -2.19
VMA7YGR020C RPL28P02406 149 aaKnown RBP1.36□□□□□ -2.19
VMA7YGR020C PPA2P28239 310 aa1.36□□□□□ -2.19
VMA7YGR020C IDH1P28834 360 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
VMA7YGR020C RMD6P39975 231 aa1.35□□□□□ -2.19
VMA7YGR020C RIO2P40160 425 aaKnown RBP1.35□□□□□ -2.19
VMA7YGR020C YNL146C-AQ3E7Z1 64 aa1.35□□□□□ -2.19
VMA7YGR020C YLR236CA0A023PZG4 107 aa1.34□□□□□ -2.19
VMA7YGR020C URA5P13298 226 aaKnown RBP1.34□□□□□ -2.19
VMA7YGR020C KSS1P14681 368 aa1.34□□□□□ -2.19
VMA7YGR020C SHE2P36068 246 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
VMA7YGR020C YBR285WP38354 144 aa1.34□□□□□ -2.19
VMA7YGR020C SEY1Q99287 776 aa1.34□□□□□ -2.19
VMA7YGR020C YBR121C-AP0C5L4 52 aa1.33□□□□□ -2.2
VMA7YGR020C BET1P22804 142 aa1.33□□□□□ -2.2
VMA7YGR020C SIP3P38717 1229 aa1.33□□□□□ -2.2
VMA7YGR020C AST2P39945 430 aaKnown RBP1.33□□□□□ -2.2
VMA7YGR020C YDR249CQ03787 373 aa1.33□□□□□ -2.2
VMA7YGR020C PTM1P32857 523 aa1.32□□□□□ -2.2
VMA7YGR020C RTC3P38804 111 aaPredicted RBP1.32□□□□□ -2.2
VMA7YGR020C YGR050CP53231 118 aa1.32□□□□□ -2.2
VMA7YGR020C YDR274CP87283 123 aa1.32□□□□□ -2.2
VMA7YGR020C CUE4Q04201 117 aaPredicted RBP1.32□□□□□ -2.2
VMA7YGR020C YKL183C-AQ3E765 70 aa1.32□□□□□ -2.2
VMA7YGR020C YHR214C-EQ8TGK0 99 aa1.32□□□□□ -2.2
VMA7YGR020C SEC4P07560 215 aaKnown RBP1.31□□□□□ -2.2
VMA7YGR020C GCN3P14741 305 aa1.31□□□□□ -2.2
VMA7YGR020C BMH2P34730 273 aaKnown RBP1.31□□□□□ -2.2
VMA7YGR020C OPY1P38271 328 aa1.31□□□□□ -2.2
VMA7YGR020C RTR1P40084 226 aaPredicted RBP1.31□□□□□ -2.2
VMA7YGR020C MGA1P53050 456 aa1.31□□□□□ -2.2
VMA7YGR020C JLP1Q12358 412 aa1.31□□□□□ -2.2
VMA7YGR020C YFR032C-BQ8TGU2 87 aa1.31□□□□□ -2.2
VMA7YGR020C SIR2P06700 562 aa1.3□□□□□ -2.2
VMA7YGR020C YRB1P41920 201 aaKnown RBP1.3□□□□□ -2.2
VMA7YGR020C OTU1P43558 301 aa1.3□□□□□ -2.2
VMA7YGR020C ADO1P47143 340 aaKnown RBP1.3□□□□□ -2.2
VMA7YGR020C PDR17P53844 350 aa1.3□□□□□ -2.2
VMA7YGR020C RAD28Q12021 506 aa1.3□□□□□ -2.2
VMA7YGR020C CYR1P08678 2026 aaKnown RBP1.3□□□□□ -2.2
VMA7YGR020C NHP6BP11633 99 aaKnown RBP1.29□□□□□ -2.2
VMA7YGR020C SEC11P15367 167 aa1.29□□□□□ -2.2
VMA7YGR020C RPB3P16370 318 aaKnown RBP1.29□□□□□ -2.2
VMA7YGR020C ERG28P40030 148 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms