RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W THP2O13539 261 aaKnown RBP1.43□□□□□ -2.18
LOC1YFR001W YMR31P19955 123 aa1.43□□□□□ -2.18
LOC1YFR001W RPL24BP24000 155 aaKnown RBP1.43□□□□□ -2.18
LOC1YFR001W VMA6P32366 345 aaKnown RBP1.43□□□□□ -2.18
LOC1YFR001W MRPL28P36527 147 aa1.43□□□□□ -2.18
LOC1YFR001W MIC12P38341 106 aa1.43□□□□□ -2.18
LOC1YFR001W FAR7P43592 221 aa1.43□□□□□ -2.18
LOC1YFR001W PRM8P53174 237 aa1.43□□□□□ -2.18
LOC1YFR001W SWP1Q02795 286 aa1.43□□□□□ -2.18
LOC1YFR001W YDR248CQ03786 193 aa1.43□□□□□ -2.18
LOC1YFR001W DBF2P22204 572 aa1.42□□□□□ -2.18
LOC1YFR001W UMP1P38293 148 aa1.42□□□□□ -2.18
LOC1YFR001W BXI1P48558 297 aa1.42□□□□□ -2.18
LOC1YFR001W YNR077CP53758 84 aa1.42□□□□□ -2.18
LOC1YFR001W GAS3Q03655 524 aa1.42□□□□□ -2.18
LOC1YFR001W SEC17P32602 292 aa1.41□□□□□ -2.18
LOC1YFR001W YET1P35723 206 aa1.41□□□□□ -2.18
LOC1YFR001W MRPL17P36528 281 aa1.41□□□□□ -2.18
LOC1YFR001W GAA1P39012 614 aa1.41□□□□□ -2.18
LOC1YFR001W NUP57P48837 541 aa1.41□□□□□ -2.18
LOC1YFR001W TSC3Q3E790 80 aa1.41□□□□□ -2.18
LOC1YFR001W PDR18P53756 1333 aa1.4□□□□□ -2.18
LOC1YFR001W TIM9O74700 87 aa1.4□□□□□ -2.19
LOC1YFR001W GPA2P10823 449 aa1.4□□□□□ -2.19
LOC1YFR001W PPA2P28239 310 aa1.4□□□□□ -2.19
LOC1YFR001W TCA17P32613 152 aa1.4□□□□□ -2.19
LOC1YFR001W APS1P35181 156 aa1.4□□□□□ -2.19
LOC1YFR001W RTC3P38804 111 aaPredicted RBP1.4□□□□□ -2.19
LOC1YFR001W SEY1Q99287 776 aa1.4□□□□□ -2.19
LOC1YFR001W RPL28P02406 149 aaKnown RBP1.39□□□□□ -2.19
LOC1YFR001W SNC2P33328 115 aa1.39□□□□□ -2.19
LOC1YFR001W TMA19P35691 167 aaKnown RBP1.39□□□□□ -2.19
LOC1YFR001W UTP30P36144 274 aaKnown RBP1.39□□□□□ -2.19
LOC1YFR001W RTR1P40084 226 aaPredicted RBP1.39□□□□□ -2.19
LOC1YFR001W OTU1P43558 301 aa1.39□□□□□ -2.19
LOC1YFR001W ANT1Q06497 328 aa1.39□□□□□ -2.19
LOC1YFR001W MCP1Q12106 302 aa1.39□□□□□ -2.19
LOC1YFR001W YKL183C-AQ3E765 70 aa1.39□□□□□ -2.19
LOC1YFR001W YBR121C-AP0C5L4 52 aa1.38□□□□□ -2.19
LOC1YFR001W BMH2P34730 273 aaKnown RBP1.38□□□□□ -2.19
LOC1YFR001W SKG1P36169 355 aa1.38□□□□□ -2.19
LOC1YFR001W SIP3P38717 1229 aa1.38□□□□□ -2.19
LOC1YFR001W GVP36P40531 326 aaKnown RBP1.38□□□□□ -2.19
LOC1YFR001W SAY1P53324 424 aa1.38□□□□□ -2.19
LOC1YFR001W FSF1Q12029 327 aaKnown RBP1.38□□□□□ -2.19
LOC1YFR001W TUS1Q06412 1307 aa1.38□□□□□ -2.19
LOC1YFR001W QCR8P08525 94 aa1.37□□□□□ -2.19
LOC1YFR001W IDH1P28834 360 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
LOC1YFR001W MGA1P53050 456 aa1.37□□□□□ -2.19
LOC1YFR001W POP3P53833 195 aaPredicted RBP1.37□□□□□ -2.19
LOC1YFR001W GPM2Q12008 311 aa1.37□□□□□ -2.19
LOC1YFR001W RIO1Q12196 484 aaKnown RBP1.37□□□□□ -2.19
LOC1YFR001W MET5P47169 1442 aa1.37□□□□□ -2.19
LOC1YFR001W NHP6BP11633 99 aaKnown RBP1.36□□□□□ -2.19
LOC1YFR001W PBN1P25580 416 aa1.36□□□□□ -2.19
LOC1YFR001W YBR209WP38311 105 aa1.36□□□□□ -2.19
LOC1YFR001W ERG28P40030 148 aa1.36□□□□□ -2.19
LOC1YFR001W EAF6P47128 113 aa1.36□□□□□ -2.19
LOC1YFR001W YGR050CP53231 118 aa1.36□□□□□ -2.19
LOC1YFR001W SEC4P07560 215 aaKnown RBP1.35□□□□□ -2.19
LOC1YFR001W GCN3P14741 305 aa1.35□□□□□ -2.19
LOC1YFR001W TFC1P32367 649 aa1.35□□□□□ -2.19
LOC1YFR001W PRX1P34227 261 aaKnown RBP1.35□□□□□ -2.19
LOC1YFR001W YRB1P41920 201 aaKnown RBP1.35□□□□□ -2.19
LOC1YFR001W ERJ5P43613 295 aaPredicted RBP1.35□□□□□ -2.19
LOC1YFR001W ADO1P47143 340 aaKnown RBP1.35□□□□□ -2.19
LOC1YFR001W PDR17P53844 350 aa1.35□□□□□ -2.19
LOC1YFR001W YPL162CQ12042 273 aa1.35□□□□□ -2.19
LOC1YFR001W JLP1Q12358 412 aa1.35□□□□□ -2.19
LOC1YFR001W KSS1P14681 368 aa1.34□□□□□ -2.19
LOC1YFR001W RMD6P39975 231 aa1.34□□□□□ -2.19
LOC1YFR001W YNL194CP40169 301 aa1.34□□□□□ -2.19
LOC1YFR001W IRC18P47056 224 aa1.34□□□□□ -2.19
LOC1YFR001W KNH1P50112 268 aa1.34□□□□□ -2.19
LOC1YFR001W CUS2P53830 285 aaPredicted RBP1.34□□□□□ -2.19
LOC1YFR001W PET191Q02772 108 aa1.34□□□□□ -2.19
LOC1YFR001W YDR249CQ03787 373 aa1.34□□□□□ -2.19
LOC1YFR001W YHR214C-EQ8TGK0 99 aa1.34□□□□□ -2.19
LOC1YFR001W NCB2Q92317 146 aa1.34□□□□□ -2.19
LOC1YFR001W ATG40Q99325 256 aa1.34□□□□□ -2.19
LOC1YFR001W YDR157WA0A023PZE8 133 aa1.33□□□□□ -2.2
LOC1YFR001W URA5P13298 226 aaKnown RBP1.33□□□□□ -2.2
LOC1YFR001W BET1P22804 142 aa1.33□□□□□ -2.2
LOC1YFR001W CBT1P36038 271 aaPredicted RBP1.33□□□□□ -2.2
LOC1YFR001W SHE2P36068 246 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
LOC1YFR001W TCD1P38756 429 aa1.33□□□□□ -2.2
LOC1YFR001W RAD17P48581 401 aa1.33□□□□□ -2.2
LOC1YFR001W YFR032C-BQ8TGU2 87 aa1.33□□□□□ -2.2
LOC1YFR001W YIL177CP40434 1758 aa1.33□□□□□ -2.2
LOC1YFR001W YJL225CP40889 1758 aa1.33□□□□□ -2.2
LOC1YFR001W CPA1P07258 411 aaKnown RBP1.32□□□□□ -2.2
LOC1YFR001W STE18P18852 110 aa1.32□□□□□ -2.2
LOC1YFR001W COQ1P18900 473 aa1.32□□□□□ -2.2
LOC1YFR001W PTM1P32857 523 aa1.32□□□□□ -2.2
LOC1YFR001W PRP18P33411 251 aaPredicted RBP1.32□□□□□ -2.2
LOC1YFR001W YBR285WP38354 144 aa1.32□□□□□ -2.2
LOC1YFR001W YER076CP40049 302 aa1.32□□□□□ -2.2
LOC1YFR001W MSS2P40990 351 aa1.32□□□□□ -2.2
LOC1YFR001W MPA43P53583 542 aaPredicted RBP1.32□□□□□ -2.2
LOC1YFR001W YLR236CA0A023PZG4 107 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms