RNA–Protein interactions for RNA: YER088C-A

YER088C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER088C-A, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088C-AYER088C-A SNX4P47057 423 aa1.18□□□□□ -2.22
YER088C-AYER088C-A RTC4P53850 401 aa1.18□□□□□ -2.22
YER088C-AYER088C-A SLM2P53955 656 aa1.18□□□□□ -2.22
YER088C-AYER088C-A GRE1Q08969 168 aa1.18□□□□□ -2.22
YER088C-AYER088C-A CDC7P06243 507 aa1.17□□□□□ -2.22
YER088C-AYER088C-A SIR2P06700 562 aa1.17□□□□□ -2.22
YER088C-AYER088C-A PUT1P09368 476 aa1.17□□□□□ -2.22
YER088C-AYER088C-A KSS1P14681 368 aa1.17□□□□□ -2.22
YER088C-AYER088C-A SNF6P18888 332 aa1.17□□□□□ -2.22
YER088C-AYER088C-A MAG1P22134 296 aaKnown RBP1.17□□□□□ -2.22
YER088C-AYER088C-A TRX3P25372 127 aa1.17□□□□□ -2.22
YER088C-AYER088C-A MED6P38782 295 aa1.17□□□□□ -2.22
YER088C-AYER088C-A IRC22P40006 225 aa1.17□□□□□ -2.22
YER088C-AYER088C-A SPO73P40031 143 aa1.17□□□□□ -2.22
YER088C-AYER088C-A HMF1P40037 129 aaKnown RBP1.17□□□□□ -2.22
YER088C-AYER088C-A COG3P40094 801 aa1.17□□□□□ -2.22
YER088C-AYER088C-A TIF34P40217 347 aaKnown RBP1.17□□□□□ -2.22
YER088C-AYER088C-A MNN5P46982 586 aa1.17□□□□□ -2.22
YER088C-AYER088C-A AIF1P52923 378 aa1.17□□□□□ -2.22
YER088C-AYER088C-A PRM15Q03262 622 aa1.17□□□□□ -2.22
YER088C-AYER088C-A FUS2Q05670 677 aa1.17□□□□□ -2.22
YER088C-AYER088C-A NOC4Q06512 552 aaPredicted RBP1.17□□□□□ -2.22
YER088C-AYER088C-A YLR036CQ07986 203 aa1.17□□□□□ -2.22
YER088C-AYER088C-A ATO3Q12359 275 aa1.17□□□□□ -2.22
YER088C-AYER088C-A CMC2Q3E7A4 109 aa1.17□□□□□ -2.22
YER088C-AYER088C-A IKI3Q06706 1349 aaKnown RBP1.16□□□□□ -2.22
YER088C-AYER088C-A MRS1P07266 363 aa1.16□□□□□ -2.22
YER088C-AYER088C-A SEC4P07560 215 aaKnown RBP1.16□□□□□ -2.22
YER088C-AYER088C-A YLR156WP0CE96 114 aa1.16□□□□□ -2.22
YER088C-AYER088C-A YLR159WP0CE97 114 aa1.16□□□□□ -2.22
YER088C-AYER088C-A YLR161WP0CE98 114 aa1.16□□□□□ -2.22
YER088C-AYER088C-A DPM1P14020 267 aaKnown RBP1.16□□□□□ -2.22
YER088C-AYER088C-A GCY1P14065 312 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
YER088C-AYER088C-A CCA1P21269 546 aa1.16□□□□□ -2.22
YER088C-AYER088C-A MRPS28P21771 286 aa1.16□□□□□ -2.22
YER088C-AYER088C-A TCA17P32613 152 aa1.16□□□□□ -2.22
YER088C-AYER088C-A SDH4P37298 181 aa1.16□□□□□ -2.22
YER088C-AYER088C-A SHG1P38337 142 aa1.16□□□□□ -2.22
YER088C-AYER088C-A SRP14P38985 146 aa1.16□□□□□ -2.22
YER088C-AYER088C-A GLE2P40066 365 aa1.16□□□□□ -2.22
YER088C-AYER088C-A PDS1P40316 373 aaPredicted RBP1.16□□□□□ -2.22
YER088C-AYER088C-A CIS3P47001 227 aa1.16□□□□□ -2.22
YER088C-AYER088C-A YJR146WP47174 117 aa1.16□□□□□ -2.22
YER088C-AYER088C-A YGR050CP53231 118 aa1.16□□□□□ -2.22
YER088C-AYER088C-A CAB4P53332 305 aa1.16□□□□□ -2.22
YER088C-AYER088C-A DIA1P54005 336 aa1.16□□□□□ -2.22
YER088C-AYER088C-A DID2P69771 204 aa1.16□□□□□ -2.22
YER088C-AYER088C-A PET191Q02772 108 aa1.16□□□□□ -2.22
YER088C-AYER088C-A YET3Q07451 203 aa1.16□□□□□ -2.22
YER088C-AYER088C-A YNG1Q08465 219 aa1.16□□□□□ -2.22
YER088C-AYER088C-A RPL26AP05743 127 aaKnown RBP1.15□□□□□ -2.23
YER088C-AYER088C-A URA5P13298 226 aaKnown RBP1.15□□□□□ -2.23
YER088C-AYER088C-A GRX2P17695 143 aaKnown RBP1.15□□□□□ -2.23
YER088C-AYER088C-A CKS1P20486 150 aaKnown RBP1.15□□□□□ -2.23
YER088C-AYER088C-A BET1P22804 142 aa1.15□□□□□ -2.23
YER088C-AYER088C-A TAH1P25638 111 aaPredicted RBP1.15□□□□□ -2.23
YER088C-AYER088C-A SCM4P32564 187 aa1.15□□□□□ -2.23
YER088C-AYER088C-A UTR5P32630 166 aa1.15□□□□□ -2.23
YER088C-AYER088C-A EGD2P38879 174 aaKnown RBP1.15□□□□□ -2.23
YER088C-AYER088C-A RSM25P40496 264 aa1.15□□□□□ -2.23
YER088C-AYER088C-A EAF6P47128 113 aa1.15□□□□□ -2.23
YER088C-AYER088C-A RPL26BP53221 127 aaKnown RBP1.15□□□□□ -2.23
YER088C-AYER088C-A YNL010WP53981 241 aaKnown RBP1.15□□□□□ -2.23
YER088C-AYER088C-A SNO1Q03144 224 aa1.15□□□□□ -2.23
YER088C-AYER088C-A TRM12Q04235 462 aa1.15□□□□□ -2.23
YER088C-AYER088C-A GRX8Q05926 109 aa1.15□□□□□ -2.23
YER088C-AYER088C-A YOL024WQ08172 172 aa1.15□□□□□ -2.23
YER088C-AYER088C-A BRX1Q08235 291 aaKnown RBP1.15□□□□□ -2.23
YER088C-AYER088C-A USB1Q12208 290 aaKnown RBP1.15□□□□□ -2.23
YER088C-AYER088C-A TSC3Q3E790 80 aa1.15□□□□□ -2.23
YER088C-AYER088C-A YFR032C-BQ8TGU2 87 aa1.15□□□□□ -2.23
YER088C-AYER088C-A MBF1O14467 151 aaKnown RBP1.14□□□□□ -2.23
YER088C-AYER088C-A SNF4P12904 322 aa1.14□□□□□ -2.23
YER088C-AYER088C-A TRR1P29509 319 aaKnown RBP1.14□□□□□ -2.23
YER088C-AYER088C-A VPS51P36116 164 aa1.14□□□□□ -2.23
YER088C-AYER088C-A UTP30P36144 274 aaKnown RBP1.14□□□□□ -2.23
YER088C-AYER088C-A CTR2P38865 189 aa1.14□□□□□ -2.23
YER088C-AYER088C-A AIM2P39721 246 aa1.14□□□□□ -2.23
YER088C-AYER088C-A PGD1P40356 397 aa1.14□□□□□ -2.23
YER088C-AYER088C-A MRPL49P40858 161 aaPredicted RBP1.14□□□□□ -2.23
YER088C-AYER088C-A SMD3P43321 101 aaKnown RBP1.14□□□□□ -2.23
YER088C-AYER088C-A YGR219WP53307 113 aa1.14□□□□□ -2.23
YER088C-AYER088C-A YNL184CP53876 108 aa1.14□□□□□ -2.23
YER088C-AYER088C-A NRK1P53915 240 aa1.14□□□□□ -2.23
YER088C-AYER088C-A COG5P53951 403 aa1.14□□□□□ -2.23
YER088C-AYER088C-A SPG3Q04398 127 aaPredicted RBP1.14□□□□□ -2.23
YER088C-AYER088C-A GIM5Q04493 163 aa1.14□□□□□ -2.23
YER088C-AYER088C-A NEJ1Q06148 342 aa1.14□□□□□ -2.23
YER088C-AYER088C-A HRT1Q08273 121 aa1.14□□□□□ -2.23
YER088C-AYER088C-A PSF1Q12488 208 aa1.14□□□□□ -2.23
YER088C-AYER088C-A TIM9O74700 87 aa1.13□□□□□ -2.23
YER088C-AYER088C-A REP2P03872 296 aa1.13□□□□□ -2.23
YER088C-AYER088C-A PET9P18239 318 aaKnown RBP1.13□□□□□ -2.23
YER088C-AYER088C-A RAD51P25454 400 aa1.13□□□□□ -2.23
YER088C-AYER088C-A PEX4P29340 183 aa1.13□□□□□ -2.23
YER088C-AYER088C-A RME1P32338 300 aaKnown RBP1.13□□□□□ -2.23
YER088C-AYER088C-A POG1P40473 351 aa1.13□□□□□ -2.23
YER088C-AYER088C-A RPL33BP41056 107 aaKnown RBP1.13□□□□□ -2.23
YER088C-AYER088C-A RGM1Q00453 211 aa1.13□□□□□ -2.23
YER088C-AYER088C-A SWP1Q02795 286 aa1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 96 ms