RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W COX5BP00425 151 aa2.18□□□□□ -2.06
PRE1YER012W RPL39P04650 51 aa2.18□□□□□ -2.06
PRE1YER012W CDC36P06100 191 aaPredicted RBP2.18□□□□□ -2.06
PRE1YER012W CMK2P22517 447 aa2.18□□□□□ -2.06
PRE1YER012W ECT1P33412 323 aa2.18□□□□□ -2.06
PRE1YER012W PEX32P38292 413 aa2.18□□□□□ -2.06
PRE1YER012W RBG1P39729 369 aa2.18□□□□□ -2.06
PRE1YER012W COG3P40094 801 aa2.18□□□□□ -2.06
PRE1YER012W STB1P42845 420 aa2.18□□□□□ -2.06
PRE1YER012W MIG2P53035 382 aa2.18□□□□□ -2.06
PRE1YER012W PET191Q02772 108 aa2.18□□□□□ -2.06
PRE1YER012W CAB5Q03941 241 aa2.18□□□□□ -2.06
PRE1YER012W SEC13Q04491 297 aaKnown RBP2.18□□□□□ -2.06
PRE1YER012W YPR127WQ06494 345 aa2.18□□□□□ -2.06
PRE1YER012W TAZ1Q06510 381 aa2.18□□□□□ -2.06
PRE1YER012W YPR195CQ06594 109 aa2.18□□□□□ -2.06
PRE1YER012W IRC19Q07843 230 aa2.18□□□□□ -2.06
PRE1YER012W MIM1Q08176 113 aa2.18□□□□□ -2.06
PRE1YER012W RRT8Q08219 342 aa2.18□□□□□ -2.06
PRE1YER012W NIP7Q08962 181 aaKnown RBP2.18□□□□□ -2.06
PRE1YER012W FRE8Q12209 686 aa2.18□□□□□ -2.06
PRE1YER012W TIR4Q12218 487 aaPredicted RBP2.18□□□□□ -2.06
PRE1YER012W YOR214CQ12282 236 aa2.18□□□□□ -2.06
PRE1YER012W YCL048W-AQ2V2Q2 79 aa2.18□□□□□ -2.06
PRE1YER012W MHF2Q3E829 80 aa2.18□□□□□ -2.06
PRE1YER012W UBA3Q99344 299 aa2.18□□□□□ -2.06
PRE1YER012W SIR2P06700 562 aa2.17□□□□□ -2.06
PRE1YER012W STE18P18852 110 aa2.17□□□□□ -2.06
PRE1YER012W CDC10P25342 322 aaKnown RBP2.17□□□□□ -2.06
PRE1YER012W CAM1P29547 415 aaKnown RBP2.17□□□□□ -2.06
PRE1YER012W MSN4P33749 630 aa2.17□□□□□ -2.06
PRE1YER012W JEN1P36035 616 aa2.17□□□□□ -2.06
PRE1YER012W YKL071WP36086 256 aa2.17□□□□□ -2.06
PRE1YER012W PRS3P38689 320 aaKnown RBP2.17□□□□□ -2.06
PRE1YER012W PCL7P40186 285 aa2.17□□□□□ -2.06
PRE1YER012W FLX1P40464 311 aa2.17□□□□□ -2.06
PRE1YER012W PAM16P42949 149 aa2.17□□□□□ -2.06
PRE1YER012W BAT2P47176 376 aaKnown RBP2.17□□□□□ -2.06
PRE1YER012W GPI8P49018 411 aa2.17□□□□□ -2.06
PRE1YER012W RMR1P53060 241 aa2.17□□□□□ -2.06
PRE1YER012W PXR1P53335 271 aaPredicted RBP2.17□□□□□ -2.06
PRE1YER012W NUP49Q02199 472 aa2.17□□□□□ -2.06
PRE1YER012W RPL21AQ02753 160 aaKnown RBP2.17□□□□□ -2.06
PRE1YER012W GRX5Q02784 150 aa2.17□□□□□ -2.06
PRE1YER012W DML1Q03652 475 aa2.17□□□□□ -2.06
PRE1YER012W OST6Q03723 332 aa2.17□□□□□ -2.06
PRE1YER012W BNA7Q04066 261 aa2.17□□□□□ -2.06
PRE1YER012W ELP6Q04868 273 aa2.17□□□□□ -2.06
PRE1YER012W MSC3Q05812 728 aa2.17□□□□□ -2.06
PRE1YER012W DTD1Q07648 150 aaKnown RBP2.17□□□□□ -2.06
PRE1YER012W CSI2Q08054 341 aa2.17□□□□□ -2.06
PRE1YER012W ATP16Q12165 160 aa2.17□□□□□ -2.06
PRE1YER012W SIA1Q12212 622 aa2.17□□□□□ -2.06
PRE1YER012W RPL21BQ12672 160 aaKnown RBP2.17□□□□□ -2.06
PRE1YER012W SAL1D6W196 494 aa2.16□□□□□ -2.06
PRE1YER012W DBP3P20447 523 aaKnown RBP2.16□□□□□ -2.06
PRE1YER012W PET18P25362 215 aa2.16□□□□□ -2.06
PRE1YER012W RPB9P27999 122 aa2.16□□□□□ -2.06
PRE1YER012W UBC8P28263 218 aa2.16□□□□□ -2.06
PRE1YER012W CLB6P32943 380 aa2.16□□□□□ -2.06
PRE1YER012W YKL162CP36052 402 aa2.16□□□□□ -2.06
PRE1YER012W RIB4P50861 169 aaPredicted RBP2.16□□□□□ -2.06
PRE1YER012W UBC13P52490 153 aa2.16□□□□□ -2.06
PRE1YER012W PRM8P53174 237 aa2.16□□□□□ -2.06
PRE1YER012W YGR168CP53293 376 aa2.16□□□□□ -2.06
PRE1YER012W MAL12P53341 584 aa2.16□□□□□ -2.06
PRE1YER012W PGA1P53896 198 aa2.16□□□□□ -2.06
PRE1YER012W RNH201P53942 307 aa2.16□□□□□ -2.06
PRE1YER012W YMR099CQ03161 297 aaKnown RBP2.16□□□□□ -2.06
PRE1YER012W UTP15Q04305 513 aaKnown RBP2.16□□□□□ -2.06
PRE1YER012W PEX12Q04370 399 aa2.16□□□□□ -2.06
PRE1YER012W RIM9Q04734 239 aa2.16□□□□□ -2.06
PRE1YER012W RNH1Q04740 348 aa2.16□□□□□ -2.06
PRE1YER012W SPC2Q04969 178 aa2.16□□□□□ -2.06
PRE1YER012W FSH2Q05015 223 aa2.16□□□□□ -2.06
PRE1YER012W PAA1Q12447 191 aaKnown RBP2.16□□□□□ -2.06
PRE1YER012W REP1P03871 373 aa2.15□□□□□ -2.07
PRE1YER012W RPL24AP04449 155 aaKnown RBP2.15□□□□□ -2.07
PRE1YER012W KIN28P06242 306 aa2.15□□□□□ -2.07
PRE1YER012W SNF6P18888 332 aa2.15□□□□□ -2.07
PRE1YER012W MIR1P23641 311 aaKnown RBP2.15□□□□□ -2.07
PRE1YER012W TFC1P32367 649 aa2.15□□□□□ -2.07
PRE1YER012W DOA4P32571 926 aa2.15□□□□□ -2.07
PRE1YER012W PDC2P32896 925 aa2.15□□□□□ -2.07
PRE1YER012W RPS0AP32905 252 aaKnown RBP2.15□□□□□ -2.07
PRE1YER012W GPX1P36014 167 aa2.15□□□□□ -2.07
PRE1YER012W YKR015CP36111 568 aa2.15□□□□□ -2.07
PRE1YER012W SPO73P40031 143 aa2.15□□□□□ -2.07
PRE1YER012W AGE2P40529 298 aa2.15□□□□□ -2.07
PRE1YER012W SBH2P52871 88 aa2.15□□□□□ -2.07
PRE1YER012W PNC1P53184 216 aaKnown RBP2.15□□□□□ -2.07
PRE1YER012W NMA1Q06178 401 aaKnown RBP2.15□□□□□ -2.07
PRE1YER012W BCP1Q06338 283 aa2.15□□□□□ -2.07
PRE1YER012W RRS1Q08746 203 aaKnown RBP2.15□□□□□ -2.07
PRE1YER012W SFM1Q12314 213 aa2.15□□□□□ -2.07
PRE1YER012W YPL119C-AQ3E751 87 aa2.15□□□□□ -2.07
PRE1YER012W MHF1Q3E835 90 aa2.15□□□□□ -2.07
PRE1YER012W SGA1P08019 549 aa2.14□□□□□ -2.07
PRE1YER012W RPL35AP0CX84 120 aaKnown RBP2.14□□□□□ -2.07
PRE1YER012W RPL35BP0CX85 120 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 89.2 ms