RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C MGM101P32787 269 aaKnown RBP2.76□□□□□ -1.97
LSM6YDR378C YKT6P36015 200 aaKnown RBP2.76□□□□□ -1.97
LSM6YDR378C MRPL28P36527 147 aa2.76□□□□□ -1.97
LSM6YDR378C YHR022CP38763 256 aa2.76□□□□□ -1.97
LSM6YDR378C AYR1P40471 297 aa2.76□□□□□ -1.97
LSM6YDR378C AIF1P52923 378 aa2.76□□□□□ -1.97
LSM6YDR378C CYT2Q00873 224 aa2.76□□□□□ -1.97
LSM6YDR378C RAS2P01120 322 aaKnown RBP2.75□□□□□ -1.97
LSM6YDR378C RMD6P39975 231 aa2.75□□□□□ -1.97
LSM6YDR378C PGD1P40356 397 aa2.75□□□□□ -1.97
LSM6YDR378C RPL33BP41056 107 aaKnown RBP2.75□□□□□ -1.97
LSM6YDR378C PRM10P42946 383 aa2.75□□□□□ -1.97
LSM6YDR378C YNR062CP53748 327 aa2.75□□□□□ -1.97
LSM6YDR378C GAS3Q03655 524 aa2.75□□□□□ -1.97
LSM6YDR378C PET9P18239 318 aaKnown RBP2.74□□□□□ -1.97
LSM6YDR378C MRPS28P21771 286 aa2.74□□□□□ -1.97
LSM6YDR378C MEI4P29467 408 aa2.74□□□□□ -1.97
LSM6YDR378C VTC1P40046 129 aaRIP-Chip data2.74□□□□□ -1.97not detected
LSM6YDR378C BMT5P40493 336 aa2.74□□□□□ -1.97
LSM6YDR378C CGR1P53188 120 aa2.74□□□□□ -1.97
LSM6YDR378C YMR226CQ05016 267 aaKnown RBP2.74□□□□□ -1.97
LSM6YDR378C IKI1P38874 309 aa2.73□□□□□ -1.97
LSM6YDR378C PEP8P40335 379 aa2.73□□□□□ -1.97
LSM6YDR378C YRA1Q12159 226 aaKnown RBP2.73□□□□□ -1.97
LSM6YDR378C TCA17P32613 152 aa2.72□□□□□ -1.97
LSM6YDR378C TRM5P38793 499 aa2.72□□□□□ -1.97
LSM6YDR378C DSE2P38844 325 aa2.72□□□□□ -1.97
LSM6YDR378C ICE2P40499 491 aa2.72□□□□□ -1.97
LSM6YDR378C SPG3Q04398 127 aaPredicted RBP2.72□□□□□ -1.97
LSM6YDR378C MDH2P22133 377 aa2.71□□□□□ -1.98
LSM6YDR378C AST2P39945 430 aaKnown RBP2.71□□□□□ -1.98
LSM6YDR378C TIR3P40552 269 aa2.71□□□□□ -1.98
LSM6YDR378C BAT2P47176 376 aaKnown RBP2.71□□□□□ -1.98
LSM6YDR378C HTB1P02293 131 aaKnown RBP2.7□□□□□ -1.98
LSM6YDR378C HTB2P02294 131 aa2.7□□□□□ -1.98
LSM6YDR378C CDC7P06243 507 aa2.7□□□□□ -1.98
LSM6YDR378C DDI2P0CH63 225 aa2.7□□□□□ -1.98
LSM6YDR378C DDI3P0CH64 225 aa2.7□□□□□ -1.98
LSM6YDR378C TAF14P35189 244 aa2.7□□□□□ -1.98
LSM6YDR378C SIP3P38717 1229 aa2.7□□□□□ -1.98
LSM6YDR378C SVP26P38869 228 aa2.7□□□□□ -1.98
LSM6YDR378C LSM4P40070 187 aaKnown RBP2.7□□□□□ -1.98
LSM6YDR378C AGE2P40529 298 aa2.7□□□□□ -1.98
LSM6YDR378C SWP1Q02795 286 aa2.7□□□□□ -1.98
LSM6YDR378C TSC3Q3E790 80 aa2.7□□□□□ -1.98
LSM6YDR378C TUS1Q06412 1307 aa2.69□□□□□ -1.98
LSM6YDR378C PTM1P32857 523 aa2.69□□□□□ -1.98
LSM6YDR378C YCR087C-AP37263 153 aa2.69□□□□□ -1.98
LSM6YDR378C RFC4P40339 323 aaKnown RBP2.69□□□□□ -1.98
LSM6YDR378C YFR054CP43622 192 aa2.69□□□□□ -1.98
LSM6YDR378C MDM32Q12171 622 aa2.69□□□□□ -1.98
LSM6YDR378C YHR214C-EQ8TGK0 99 aa2.69□□□□□ -1.98
LSM6YDR378C RPL25P04456 142 aaKnown RBP2.68□□□□□ -1.98
LSM6YDR378C SEC4P07560 215 aaKnown RBP2.68□□□□□ -1.98
LSM6YDR378C CBF1P17106 351 aa2.68□□□□□ -1.98
LSM6YDR378C RFA3P26755 122 aaKnown RBP2.68□□□□□ -1.98
LSM6YDR378C SPS18P32572 300 aa2.68□□□□□ -1.98
LSM6YDR378C CUS2P53830 285 aaPredicted RBP2.68□□□□□ -1.98
LSM6YDR378C YPL162CQ12042 273 aa2.68□□□□□ -1.98
LSM6YDR378C ADF1Q2V2Q1 113 aa2.68□□□□□ -1.98
LSM6YDR378C TIM9O74700 87 aa2.67□□□□□ -1.98
LSM6YDR378C KSS1P14681 368 aa2.67□□□□□ -1.98
LSM6YDR378C MER1P16523 270 aa2.67□□□□□ -1.98
LSM6YDR378C SEC17P32602 292 aa2.67□□□□□ -1.98
LSM6YDR378C YET1P35723 206 aa2.67□□□□□ -1.98
LSM6YDR378C UTP30P36144 274 aaKnown RBP2.67□□□□□ -1.98
LSM6YDR378C MRPL17P36528 281 aa2.67□□□□□ -1.98
LSM6YDR378C UMP1P38293 148 aa2.67□□□□□ -1.98
LSM6YDR378C YGR050CP53231 118 aa2.67□□□□□ -1.98
LSM6YDR378C LSM7P53905 115 aaKnown RBP2.67□□□□□ -1.98
LSM6YDR378C BUD25P85052 153 aa2.67□□□□□ -1.98
LSM6YDR378C MRPS17Q03246 237 aaPredicted RBP2.67□□□□□ -1.98
LSM6YDR378C MCP1Q12106 302 aa2.67□□□□□ -1.98
LSM6YDR378C RPL27BP0C2H7 136 aaKnown RBP2.66□□□□□ -1.98
LSM6YDR378C MATALPHA2P0CY08 210 aa2.66□□□□□ -1.98
LSM6YDR378C HMLALPHA2P0CY09 210 aa2.66□□□□□ -1.98
LSM6YDR378C BET1P22804 142 aa2.66□□□□□ -1.98
LSM6YDR378C SNC2P33328 115 aa2.66□□□□□ -1.98
LSM6YDR378C YNL217WP40152 326 aa2.66□□□□□ -1.98
LSM6YDR378C PET191Q02772 108 aa2.66□□□□□ -1.98
LSM6YDR378C URA5P13298 226 aaKnown RBP2.65□□□□□ -1.99
LSM6YDR378C GVP36P40531 326 aaKnown RBP2.65□□□□□ -1.99
LSM6YDR378C DOC1P53068 250 aa2.65□□□□□ -1.99
LSM6YDR378C BOL2P53082 120 aa2.65□□□□□ -1.99
LSM6YDR378C SML1Q04964 104 aa2.65□□□□□ -1.99
LSM6YDR378C GET4Q12125 312 aa2.65□□□□□ -1.99
LSM6YDR378C BEM2P39960 2167 aaKnown RBP2.65□□□□□ -1.99
LSM6YDR378C MAG1P22134 296 aaKnown RBP2.64□□□□□ -1.99
LSM6YDR378C YRB2P40517 327 aa2.64□□□□□ -1.99
LSM6YDR378C YFR032C-BQ8TGU2 87 aa2.64□□□□□ -1.99
LSM6YDR378C GET1P53192 235 aa2.63□□□□□ -1.99
LSM6YDR378C COG5P53951 403 aa2.63□□□□□ -1.99
LSM6YDR378C YDR249CQ03787 373 aa2.63□□□□□ -1.99
LSM6YDR378C AVT2P39981 480 aa2.62□□□□□ -1.99
LSM6YDR378C HMF1P40037 129 aaKnown RBP2.62□□□□□ -1.99
LSM6YDR378C EAF6P47128 113 aa2.62□□□□□ -1.99
LSM6YDR378C YOL160WQ08321 113 aa2.62□□□□□ -1.99
LSM6YDR378C ABP140Q08641 628 aaKnown RBP2.62□□□□□ -1.99
LSM6YDR378C RPB3P16370 318 aaKnown RBP2.61□□□□□ -1.99
LSM6YDR378C FZF1P32805 299 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms