RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C APJ1P53940 528 aa2.67□□□□□ -1.98
SHU2YDR078C GAS3Q03655 524 aa2.67□□□□□ -1.98
SHU2YDR078C CDD1Q06549 142 aa2.67□□□□□ -1.98
SHU2YDR078C RDS3Q06835 107 aaPredicted RBP2.67□□□□□ -1.98
SHU2YDR078C YNG1Q08465 219 aa2.67□□□□□ -1.98
SHU2YDR078C GPM2Q12008 311 aa2.67□□□□□ -1.98
SHU2YDR078C YHR214C-EQ8TGK0 99 aa2.67□□□□□ -1.98
SHU2YDR078C FAB1P34756 2278 aa2.67□□□□□ -1.98
SHU2YDR078C REP2P03872 296 aa2.66□□□□□ -1.98
SHU2YDR078C RPL25P04456 142 aaKnown RBP2.66□□□□□ -1.98
SHU2YDR078C SEC17P32602 292 aa2.66□□□□□ -1.98
SHU2YDR078C CLB6P32943 380 aa2.66□□□□□ -1.98
SHU2YDR078C DSK2P48510 373 aa2.66□□□□□ -1.98
SHU2YDR078C COS6P53344 381 aa2.66□□□□□ -1.98
SHU2YDR078C SLM2P53955 656 aa2.66□□□□□ -1.98
SHU2YDR078C TRM12Q04235 462 aa2.66□□□□□ -1.98
SHU2YDR078C GGA1Q06336 557 aa2.66□□□□□ -1.98
SHU2YDR078C VPS68Q12016 184 aa2.66□□□□□ -1.98
SHU2YDR078C CDC8P00572 216 aa2.65□□□□□ -1.99
SHU2YDR078C PUT1P09368 476 aa2.65□□□□□ -1.99
SHU2YDR078C MAG1P22134 296 aaKnown RBP2.65□□□□□ -1.99
SHU2YDR078C UTP30P36144 274 aaKnown RBP2.65□□□□□ -1.99
SHU2YDR078C EGD2P38879 174 aaKnown RBP2.65□□□□□ -1.99
SHU2YDR078C COG5P53951 403 aa2.65□□□□□ -1.99
SHU2YDR078C DIA1P54005 336 aa2.65□□□□□ -1.99
SHU2YDR078C MIX17Q03667 156 aa2.65□□□□□ -1.99
SHU2YDR078C SUE1Q06524 206 aa2.65□□□□□ -1.99
SHU2YDR078C ARR2Q06597 130 aa2.65□□□□□ -1.99
SHU2YDR078C USB1Q12208 290 aaKnown RBP2.65□□□□□ -1.99
SHU2YDR078C MSW1P04803 379 aa2.64□□□□□ -1.99
SHU2YDR078C MRS1P07266 363 aa2.64□□□□□ -1.99
SHU2YDR078C YLR156WP0CE96 114 aa2.64□□□□□ -1.99
SHU2YDR078C YLR159WP0CE97 114 aa2.64□□□□□ -1.99
SHU2YDR078C YLR161WP0CE98 114 aa2.64□□□□□ -1.99
SHU2YDR078C MED6P38782 295 aa2.64□□□□□ -1.99
SHU2YDR078C AST2P39945 430 aaKnown RBP2.64□□□□□ -1.99
SHU2YDR078C HMF1P40037 129 aaKnown RBP2.64□□□□□ -1.99
SHU2YDR078C AIM25P47140 327 aa2.64□□□□□ -1.99
SHU2YDR078C YOL160WQ08321 113 aa2.64□□□□□ -1.99
SHU2YDR078C YPL162CQ12042 273 aa2.64□□□□□ -1.99
SHU2YDR078C MHT1Q12525 324 aa2.64□□□□□ -1.99
SHU2YDR078C KSS1P14681 368 aa2.63□□□□□ -1.99
SHU2YDR078C CAF4P36130 643 aa2.63□□□□□ -1.99
SHU2YDR078C SKG1P36169 355 aa2.63□□□□□ -1.99
SHU2YDR078C PRM10P42946 383 aa2.63□□□□□ -1.99
SHU2YDR078C MNN5P46982 586 aa2.63□□□□□ -1.99
SHU2YDR078C MCP1Q12106 302 aa2.63□□□□□ -1.99
SHU2YDR078C UTR5P32630 166 aa2.62□□□□□ -1.99
SHU2YDR078C SEC72P39742 193 aaKnown RBP2.62□□□□□ -1.99
SHU2YDR078C YER034WP40022 185 aaKnown RBP2.62□□□□□ -1.99
SHU2YDR078C YDR249CQ03787 373 aa2.62□□□□□ -1.99
SHU2YDR078C NEJ1Q06148 342 aa2.62□□□□□ -1.99
SHU2YDR078C YET3Q07451 203 aa2.62□□□□□ -1.99
SHU2YDR078C EMC6Q12431 108 aa2.62□□□□□ -1.99
SHU2YDR078C IKI3Q06706 1349 aaKnown RBP2.62□□□□□ -1.99
SHU2YDR078C SHG1P38337 142 aa2.61□□□□□ -1.99
SHU2YDR078C YHR180WP38868 163 aa2.61□□□□□ -1.99
SHU2YDR078C AIF1P52923 378 aa2.61□□□□□ -1.99
SHU2YDR078C RTC4P53850 401 aa2.61□□□□□ -1.99
SHU2YDR078C SWP1Q02795 286 aa2.61□□□□□ -1.99
SHU2YDR078C ARO80Q04052 950 aa2.61□□□□□ -1.99
SHU2YDR078C SIR2P06700 562 aa2.6□□□□□ -1.99
SHU2YDR078C BET1P22804 142 aa2.6□□□□□ -1.99
SHU2YDR078C YOR062CP36025 268 aa2.6□□□□□ -1.99
SHU2YDR078C PDS1P40316 373 aaPredicted RBP2.6□□□□□ -1.99
SHU2YDR078C POG1P40473 351 aa2.6□□□□□ -1.99
SHU2YDR078C ERG10P41338 398 aaKnown RBP2.6□□□□□ -1.99
SHU2YDR078C YNL184CP53876 108 aa2.6□□□□□ -1.99
SHU2YDR078C PRM15Q03262 622 aa2.6□□□□□ -1.99
SHU2YDR078C NOC4Q06512 552 aaPredicted RBP2.6□□□□□ -1.99
SHU2YDR078C GRE1Q08969 168 aa2.6□□□□□ -1.99
SHU2YDR078C YFR032C-BQ8TGU2 87 aa2.6□□□□□ -1.99
SHU2YDR078C IGO2Q9P305 131 aa2.6□□□□□ -1.99
SHU2YDR078C URA5P13298 226 aaKnown RBP2.59□□□□□ -1.99
SHU2YDR078C RPB3P16370 318 aaKnown RBP2.59□□□□□ -1.99
SHU2YDR078C MEI4P29467 408 aa2.59□□□□□ -1.99
SHU2YDR078C MDH3P32419 343 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
SHU2YDR078C YGR219WP53307 113 aa2.59□□□□□ -1.99
SHU2YDR078C SPG3Q04398 127 aaPredicted RBP2.59□□□□□ -1.99
SHU2YDR078C ATO3Q12359 275 aa2.59□□□□□ -1.99
SHU2YDR078C TSC3Q3E790 80 aa2.59□□□□□ -1.99
SHU2YDR078C SNF6P18888 332 aa2.58□□□□□ -2
SHU2YDR078C CNB1P25296 175 aa2.58□□□□□ -2
SHU2YDR078C PGD1P40356 397 aa2.58□□□□□ -2
SHU2YDR078C UBC12P52491 188 aa2.58□□□□□ -2
SHU2YDR078C NRK1P53915 240 aa2.58□□□□□ -2
SHU2YDR078C SNO1Q03144 224 aa2.58□□□□□ -2
SHU2YDR078C CGI121Q03705 181 aaKnown RBP2.58□□□□□ -2
SHU2YDR078C TIM9O74700 87 aa2.57□□□□□ -2
SHU2YDR078C RPL35AP0CX84 120 aaKnown RBP2.57□□□□□ -2
SHU2YDR078C RPL35BP0CX85 120 aaKnown RBP2.57□□□□□ -2
SHU2YDR078C PET9P18239 318 aaKnown RBP2.57□□□□□ -2
SHU2YDR078C TAH1P25638 111 aaPredicted RBP2.57□□□□□ -2
SHU2YDR078C MRPL17P36528 281 aa2.57□□□□□ -2
SHU2YDR078C GLE2P40066 365 aa2.57□□□□□ -2
SHU2YDR078C CIS3P47001 227 aa2.57□□□□□ -2
SHU2YDR078C DAD3P69850 94 aa2.57□□□□□ -2
SHU2YDR078C GIM5Q04493 163 aa2.57□□□□□ -2
SHU2YDR078C YLR036CQ07986 203 aa2.57□□□□□ -2
SHU2YDR078C YOL024WQ08172 172 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms