RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W MGA1P53050 456 aa1.57□□□□□ -2.16
SHS1YDL225W PGA2P53903 129 aa1.57□□□□□ -2.16
SHS1YDL225W SNZ1Q03148 297 aa1.57□□□□□ -2.16
SHS1YDL225W JLP1Q12358 412 aa1.57□□□□□ -2.16
SHS1YDL225W GIS3Q12418 502 aa1.57□□□□□ -2.16
SHS1YDL225W CDC33P07260 213 aaKnown RBP1.56□□□□□ -2.16
SHS1YDL225W APS1P35181 156 aa1.56□□□□□ -2.16
SHS1YDL225W POP4P38336 279 aa1.56□□□□□ -2.16
SHS1YDL225W PGD1P40356 397 aa1.56□□□□□ -2.16
SHS1YDL225W TIR3P40552 269 aa1.56□□□□□ -2.16
SHS1YDL225W IRC18P47056 224 aa1.56□□□□□ -2.16
SHS1YDL225W GAS3Q03655 524 aa1.56□□□□□ -2.16
SHS1YDL225W MRPL28P36527 147 aa1.55□□□□□ -2.16
SHS1YDL225W RPL33BP41056 107 aaKnown RBP1.55□□□□□ -2.16
SHS1YDL225W GCN3P14741 305 aa1.55□□□□□ -2.16
SHS1YDL225W MDH2P22133 377 aa1.55□□□□□ -2.16
SHS1YDL225W PRX1P34227 261 aaKnown RBP1.55□□□□□ -2.16
SHS1YDL225W VTC1P40046 129 aaRIP-Chip data1.55□□□□□ -2.16not detected
SHS1YDL225W ICE2P40499 491 aa1.55□□□□□ -2.16
SHS1YDL225W AGE2P40529 298 aa1.55□□□□□ -2.16
SHS1YDL225W CWC23P52868 283 aaPredicted RBP1.55□□□□□ -2.16
SHS1YDL225W PDR17P53844 350 aa1.55□□□□□ -2.16
SHS1YDL225W NTG1P31378 399 aa1.54□□□□□ -2.16
SHS1YDL225W TCA17P32613 152 aa1.54□□□□□ -2.16
SHS1YDL225W SVP26P38869 228 aa1.54□□□□□ -2.16
SHS1YDL225W CDC36P06100 191 aaPredicted RBP1.53□□□□□ -2.16
SHS1YDL225W RPL27BP0C2H7 136 aaKnown RBP1.53□□□□□ -2.16
SHS1YDL225W RPB4P20433 221 aaPredicted RBP1.53□□□□□ -2.16
SHS1YDL225W MRPS28P21771 286 aa1.53□□□□□ -2.16
SHS1YDL225W SKG1P36169 355 aa1.53□□□□□ -2.16
SHS1YDL225W SIP3P38717 1229 aa1.53□□□□□ -2.16
SHS1YDL225W YRB2P40517 327 aa1.53□□□□□ -2.16
SHS1YDL225W BOL2P53082 120 aa1.53□□□□□ -2.16
SHS1YDL225W BUD25P85052 153 aa1.53□□□□□ -2.16
SHS1YDL225W PET191Q02772 108 aa1.53□□□□□ -2.16
SHS1YDL225W SWP1Q02795 286 aa1.53□□□□□ -2.16
SHS1YDL225W BNA7Q04066 261 aa1.53□□□□□ -2.16
SHS1YDL225W SML1Q04964 104 aa1.53□□□□□ -2.16
SHS1YDL225W YHR214C-EQ8TGK0 99 aa1.53□□□□□ -2.16
SHS1YDL225W SEC17P32602 292 aa1.52□□□□□ -2.17
SHS1YDL225W TAF14P35189 244 aa1.52□□□□□ -2.17
SHS1YDL225W UTP30P36144 274 aaKnown RBP1.52□□□□□ -2.17
SHS1YDL225W MRPL17P36528 281 aa1.52□□□□□ -2.17
SHS1YDL225W MCP1Q12106 302 aa1.52□□□□□ -2.17
SHS1YDL225W TSC3Q3E790 80 aa1.52□□□□□ -2.17
SHS1YDL225W TIM9O74700 87 aa1.51□□□□□ -2.17
SHS1YDL225W SEC4P07560 215 aaKnown RBP1.51□□□□□ -2.17
SHS1YDL225W IDH1P28834 360 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
SHS1YDL225W MGM101P32787 269 aaKnown RBP1.51□□□□□ -2.17
SHS1YDL225W IKI1P38874 309 aa1.51□□□□□ -2.17
SHS1YDL225W RMD6P39975 231 aa1.51□□□□□ -2.17
SHS1YDL225W YNL217WP40152 326 aa1.51□□□□□ -2.17
SHS1YDL225W TUS1Q06412 1307 aa1.51□□□□□ -2.17
SHS1YDL225W YET1P35723 206 aa1.51□□□□□ -2.17
SHS1YDL225W YKT6P36015 200 aaKnown RBP1.51□□□□□ -2.17
SHS1YDL225W UMP1P38293 148 aa1.51□□□□□ -2.17
SHS1YDL225W YBR219CP38317 127 aa1.51□□□□□ -2.17
SHS1YDL225W DOC1P53068 250 aa1.51□□□□□ -2.17
SHS1YDL225W YGR050CP53231 118 aa1.51□□□□□ -2.17
SHS1YDL225W YNR077CP53758 84 aa1.51□□□□□ -2.17
SHS1YDL225W MER1P16523 270 aa1.5□□□□□ -2.17
SHS1YDL225W SPS18P32572 300 aa1.5□□□□□ -2.17
SHS1YDL225W AST2P39945 430 aaKnown RBP1.5□□□□□ -2.17
SHS1YDL225W AVT2P39981 480 aa1.5□□□□□ -2.17
SHS1YDL225W YPL162CQ12042 273 aa1.5□□□□□ -2.17
SHS1YDL225W YFR032C-BQ8TGU2 87 aa1.5□□□□□ -2.17
SHS1YDL225W KSS1P14681 368 aa1.49□□□□□ -2.17
SHS1YDL225W RFA3P26755 122 aaKnown RBP1.49□□□□□ -2.17
SHS1YDL225W PTM1P32857 523 aa1.49□□□□□ -2.17
SHS1YDL225W SNC2P33328 115 aa1.49□□□□□ -2.17
SHS1YDL225W GVP36P40531 326 aaKnown RBP1.49□□□□□ -2.17
SHS1YDL225W EAF6P47128 113 aa1.49□□□□□ -2.17
SHS1YDL225W YRA1Q12159 226 aaKnown RBP1.49□□□□□ -2.17
SHS1YDL225W CYR1P08678 2026 aaKnown RBP1.49□□□□□ -2.17
SHS1YDL225W RPL25P04456 142 aaKnown RBP1.48□□□□□ -2.17
SHS1YDL225W BET1P22804 142 aa1.48□□□□□ -2.17
SHS1YDL225W FZF1P32805 299 aa1.48□□□□□ -2.17
SHS1YDL225W YCR087C-AP37263 153 aa1.48□□□□□ -2.17
SHS1YDL225W TRM5P38793 499 aa1.48□□□□□ -2.17
SHS1YDL225W GAA1P39012 614 aa1.48□□□□□ -2.17
SHS1YDL225W YER135CP40082 130 aa1.48□□□□□ -2.17
SHS1YDL225W LSM7P53905 115 aaKnown RBP1.48□□□□□ -2.17
SHS1YDL225W YDR249CQ03787 373 aa1.48□□□□□ -2.17
SHS1YDL225W CSI2Q08054 341 aa1.48□□□□□ -2.17
SHS1YDL225W YOL160WQ08321 113 aa1.48□□□□□ -2.17
SHS1YDL225W FLO9P39712 1322 aa1.48□□□□□ -2.17
SHS1YDL225W HTB1P02293 131 aaKnown RBP1.48□□□□□ -2.17
SHS1YDL225W HTB2P02294 131 aa1.48□□□□□ -2.17
SHS1YDL225W YOL162WP0CF19 215 aa1.48□□□□□ -2.17
SHS1YDL225W URA5P13298 226 aaKnown RBP1.48□□□□□ -2.17
SHS1YDL225W CUS2P53830 285 aaPredicted RBP1.48□□□□□ -2.17
SHS1YDL225W COG5P53951 403 aa1.48□□□□□ -2.17
SHS1YDL225W YDR274CP87283 123 aa1.48□□□□□ -2.17
SHS1YDL225W CWC21Q03375 135 aaKnown RBP1.48□□□□□ -2.17
SHS1YDL225W YMR226CQ05016 267 aaKnown RBP1.48□□□□□ -2.17
SHS1YDL225W RPB3P16370 318 aaKnown RBP1.47□□□□□ -2.17
SHS1YDL225W CBF1P17106 351 aa1.47□□□□□ -2.17
SHS1YDL225W GPM2Q12008 311 aa1.47□□□□□ -2.17
SHS1YDL225W FSF1Q12029 327 aaKnown RBP1.47□□□□□ -2.17
SHS1YDL225W MDM32Q12171 622 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms