RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C ALG6Q12001 544 aaKnown RBP5.03□□□□□ -1.6
MDH3YDL078C POM33Q12164 279 aa5.03□□□□□ -1.6
MDH3YDL078C YHR214C-EQ8TGK0 99 aa5.03□□□□□ -1.6
MDH3YDL078C DDI2P0CH63 225 aa5.02□□□□□ -1.61
MDH3YDL078C DDI3P0CH64 225 aa5.02□□□□□ -1.61
MDH3YDL078C SEC12P11655 471 aa5.02□□□□□ -1.61
MDH3YDL078C SPS100P13130 326 aa5.02□□□□□ -1.61
MDH3YDL078C MDH1P17505 334 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
MDH3YDL078C ZRC1P20107 442 aa5.02□□□□□ -1.61
MDH3YDL078C PET18P25362 215 aa5.02□□□□□ -1.61
MDH3YDL078C ARO2P28777 376 aaKnown RBP5.02□□□□□ -1.61
MDH3YDL078C PRE4P30657 266 aa5.02□□□□□ -1.61
MDH3YDL078C PAD1P33751 242 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
MDH3YDL078C YOX1P34161 385 aa5.02□□□□□ -1.61
MDH3YDL078C MTR2P34232 184 aaKnown RBP5.02□□□□□ -1.61
MDH3YDL078C YKL107WP34251 309 aa5.02□□□□□ -1.61
MDH3YDL078C RPS20P38701 121 aaKnown RBP5.02□□□□□ -1.61
MDH3YDL078C MTC6P38849 526 aa5.02□□□□□ -1.61
MDH3YDL078C PRE6P40303 254 aaKnown RBP5.02□□□□□ -1.61
MDH3YDL078C AVT7P40501 490 aa5.02□□□□□ -1.61
MDH3YDL078C EXG2P52911 562 aa5.02□□□□□ -1.61
MDH3YDL078C PCP1P53259 346 aa5.02□□□□□ -1.61
MDH3YDL078C YNR066CP53752 436 aa5.02□□□□□ -1.61
MDH3YDL078C ARG5,6Q01217 863 aa5.02□□□□□ -1.61
MDH3YDL078C YPL080CQ02826 108 aa5.02□□□□□ -1.61
MDH3YDL078C SHH3Q04487 196 aa5.02□□□□□ -1.61
MDH3YDL078C SEN15Q04675 128 aa5.02□□□□□ -1.61
MDH3YDL078C YPR145C-AQ2V2P0 78 aa5.02□□□□□ -1.61
MDH3YDL078C SLO1Q3E784 85 aa5.02□□□□□ -1.61
MDH3YDL078C Q0142Q9ZZW4 58 aa5.02□□□□□ -1.61
MDH3YDL078C ADH3P07246 375 aaKnown RBP5.01□□□□□ -1.61
MDH3YDL078C CPR1P14832 162 aaKnown RBP5.01□□□□□ -1.61
MDH3YDL078C ERS1P17261 260 aa5.01□□□□□ -1.61
MDH3YDL078C MDH3P32419 343 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
MDH3YDL078C MRPL28P36527 147 aa5.01□□□□□ -1.61
MDH3YDL078C SDH4P37298 181 aa5.01□□□□□ -1.61
MDH3YDL078C DTR1P38125 572 aa5.01□□□□□ -1.61
MDH3YDL078C RPF1P38805 295 aaKnown RBP5.01□□□□□ -1.61
MDH3YDL078C BMT5P40493 336 aa5.01□□□□□ -1.61
MDH3YDL078C YJL218WP40892 196 aaKnown RBP5.01□□□□□ -1.61
MDH3YDL078C GWT1P47026 490 aa5.01□□□□□ -1.61
MDH3YDL078C HMS2P47175 358 aa5.01□□□□□ -1.61
MDH3YDL078C DAN1P47178 298 aa5.01□□□□□ -1.61
MDH3YDL078C AVT4P50944 713 aa5.01□□□□□ -1.61
MDH3YDL078C PHO23P50947 330 aa5.01□□□□□ -1.61
MDH3YDL078C YGL159WP53110 370 aa5.01□□□□□ -1.61
MDH3YDL078C YGR151CP53287 111 aa5.01□□□□□ -1.61
MDH3YDL078C BUD17P53727 317 aa5.01□□□□□ -1.61
MDH3YDL078C YPL067CQ02754 198 aa5.01□□□□□ -1.61
MDH3YDL078C VPS28Q02767 242 aa5.01□□□□□ -1.61
MDH3YDL078C PKR1Q03880 122 aaKnown RBP5.01□□□□□ -1.61
MDH3YDL078C GMC1Q04399 608 aa5.01□□□□□ -1.61
MDH3YDL078C ATG39Q06159 398 aa5.01□□□□□ -1.61
MDH3YDL078C MIM1Q08176 113 aa5.01□□□□□ -1.61
MDH3YDL078C RAD28Q12021 506 aa5.01□□□□□ -1.61
MDH3YDL078C FCF2Q12035 217 aaPredicted RBP5.01□□□□□ -1.61
MDH3YDL078C TGS1Q12052 315 aa5.01□□□□□ -1.61
MDH3YDL078C RRI1Q12468 440 aa5.01□□□□□ -1.61
MDH3YDL078C TMA17Q12513 150 aa5.01□□□□□ -1.61
MDH3YDL078C RPL35AP0CX84 120 aaKnown RBP5□□□□□ -1.61
MDH3YDL078C RPL35BP0CX85 120 aaKnown RBP5□□□□□ -1.61
MDH3YDL078C NHP6BP11633 99 aaKnown RBP5□□□□□ -1.61
MDH3YDL078C RPB3P16370 318 aaKnown RBP5□□□□□ -1.61
MDH3YDL078C STE50P25344 346 aa5□□□□□ -1.61
MDH3YDL078C YCP4P25349 247 aaKnown RBP5□□□□□ -1.61
MDH3YDL078C EMP24P32803 203 aaKnown RBP5□□□□□ -1.61
MDH3YDL078C SRY1P36007 326 aa5□□□□□ -1.61
MDH3YDL078C VBA2P38358 474 aaKnown RBP5□□□□□ -1.61
MDH3YDL078C MDM31P38880 579 aa5□□□□□ -1.61
MDH3YDL078C CHL4P38907 458 aa5□□□□□ -1.61
MDH3YDL078C SEC72P39742 193 aaKnown RBP5□□□□□ -1.61
MDH3YDL078C ISC1P40015 477 aaKnown RBP5□□□□□ -1.61
MDH3YDL078C YFL051CP43552 160 aa5□□□□□ -1.61
MDH3YDL078C MOB2P43563 287 aa5□□□□□ -1.61
MDH3YDL078C HNT2P49775 206 aa5□□□□□ -1.61
MDH3YDL078C TIM21P53220 239 aa5□□□□□ -1.61
MDH3YDL078C YGR045CP53229 120 aa5□□□□□ -1.61
MDH3YDL078C GPI15P53961 229 aa5□□□□□ -1.61
MDH3YDL078C DYN2Q02647 92 aa5□□□□□ -1.61
MDH3YDL078C GRX5Q02784 150 aa5□□□□□ -1.61
MDH3YDL078C STD1Q02794 444 aa5□□□□□ -1.61
MDH3YDL078C SNO1Q03144 224 aa5□□□□□ -1.61
MDH3YDL078C RCE1Q03530 315 aa5□□□□□ -1.61
MDH3YDL078C API2Q04413 109 aa5□□□□□ -1.61
MDH3YDL078C CNL1Q06333 122 aa5□□□□□ -1.61
MDH3YDL078C ANT1Q06497 328 aa5□□□□□ -1.61
MDH3YDL078C NCE102Q12207 173 aaRIP-Chip data5□□□□□ -1.61not detected
MDH3YDL078C SIA1Q12212 622 aa5□□□□□ -1.61
MDH3YDL078C YLR099W-AQ3E798 87 aa5□□□□□ -1.61
MDH3YDL078C MSW1P04803 379 aa4.99□□□□□ -1.61
MDH3YDL078C QCR2P07257 368 aa4.99□□□□□ -1.61
MDH3YDL078C RPS16AP0CX51 143 aaKnown RBP4.99□□□□□ -1.61
MDH3YDL078C RPS16BP0CX52 143 aaKnown RBP4.99□□□□□ -1.61
MDH3YDL078C MNS1P32906 549 aa4.99□□□□□ -1.61
MDH3YDL078C FLO10P36170 1169 aa4.99□□□□□ -1.61
MDH3YDL078C FAT1P38225 669 aa4.99□□□□□ -1.61
MDH3YDL078C RTC2P38279 296 aa4.99□□□□□ -1.61
MDH3YDL078C GCV3P39726 170 aaPredicted RBP4.99□□□□□ -1.61
MDH3YDL078C HPA3P39979 161 aa4.99□□□□□ -1.61
MDH3YDL078C RRG9P40156 214 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms