RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W PSF1Q12488 208 aa2.17□□□□□ -2.06
DPB3YBR278W TDA8Q6B2U8 126 aa2.17□□□□□ -2.06
DPB3YBR278W YHR214C-EQ8TGK0 99 aa2.17□□□□□ -2.06
DPB3YBR278W REP2P03872 296 aa2.16□□□□□ -2.06
DPB3YBR278W RPL25P04456 142 aaKnown RBP2.16□□□□□ -2.06
DPB3YBR278W MAG1P22134 296 aaKnown RBP2.16□□□□□ -2.06
DPB3YBR278W SCM4P32564 187 aa2.16□□□□□ -2.06
DPB3YBR278W EGD2P38879 174 aaKnown RBP2.16□□□□□ -2.06
DPB3YBR278W YER034WP40022 185 aaKnown RBP2.16□□□□□ -2.06
DPB3YBR278W SNX4P47057 423 aa2.16□□□□□ -2.06
DPB3YBR278W DIA1P54005 336 aa2.16□□□□□ -2.06
DPB3YBR278W GGA1Q06336 557 aa2.16□□□□□ -2.06
DPB3YBR278W YPL162CQ12042 273 aa2.16□□□□□ -2.06
DPB3YBR278W USB1Q12208 290 aaKnown RBP2.16□□□□□ -2.06
DPB3YBR278W CDC8P00572 216 aa2.15□□□□□ -2.07
DPB3YBR278W MRS1P07266 363 aa2.15□□□□□ -2.07
DPB3YBR278W SEC17P32602 292 aa2.15□□□□□ -2.07
DPB3YBR278W UTP30P36144 274 aaKnown RBP2.15□□□□□ -2.07
DPB3YBR278W AST2P39945 430 aaKnown RBP2.15□□□□□ -2.07
DPB3YBR278W HMF1P40037 129 aaKnown RBP2.15□□□□□ -2.07
DPB3YBR278W AIM25P47140 327 aa2.15□□□□□ -2.07
DPB3YBR278W DSK2P48510 373 aa2.15□□□□□ -2.07
DPB3YBR278W GRE1Q08969 168 aa2.15□□□□□ -2.07
DPB3YBR278W VPS68Q12016 184 aa2.15□□□□□ -2.07
DPB3YBR278W CCH1P50077 2039 aa2.15□□□□□ -2.07
DPB3YBR278W IKI3Q06706 1349 aaKnown RBP2.15□□□□□ -2.07
DPB3YBR278W MSW1P04803 379 aa2.14□□□□□ -2.07
DPB3YBR278W PUT1P09368 476 aa2.14□□□□□ -2.07
DPB3YBR278W YLR156WP0CE96 114 aa2.14□□□□□ -2.07
DPB3YBR278W YLR159WP0CE97 114 aa2.14□□□□□ -2.07
DPB3YBR278W YLR161WP0CE98 114 aa2.14□□□□□ -2.07
DPB3YBR278W VMA11P32842 164 aa2.14□□□□□ -2.07
DPB3YBR278W CAF4P36130 643 aa2.14□□□□□ -2.07
DPB3YBR278W MNN5P46982 586 aa2.14□□□□□ -2.07
DPB3YBR278W COG5P53951 403 aa2.14□□□□□ -2.07
DPB3YBR278W SLM2P53955 656 aa2.14□□□□□ -2.07
DPB3YBR278W MIX17Q03667 156 aa2.14□□□□□ -2.07
DPB3YBR278W ARR2Q06597 130 aa2.14□□□□□ -2.07
DPB3YBR278W RDS3Q06835 107 aaPredicted RBP2.14□□□□□ -2.07
DPB3YBR278W YOL160WQ08321 113 aa2.14□□□□□ -2.07
DPB3YBR278W KSS1P14681 368 aa2.13□□□□□ -2.07
DPB3YBR278W CLB6P32943 380 aa2.13□□□□□ -2.07
DPB3YBR278W SHG1P38337 142 aa2.13□□□□□ -2.07
DPB3YBR278W MED6P38782 295 aa2.13□□□□□ -2.07
DPB3YBR278W SEC72P39742 193 aaKnown RBP2.13□□□□□ -2.07
DPB3YBR278W ERG10P41338 398 aaKnown RBP2.13□□□□□ -2.07
DPB3YBR278W PRM10P42946 383 aa2.13□□□□□ -2.07
DPB3YBR278W RTC4P53850 401 aa2.13□□□□□ -2.07
DPB3YBR278W YDR249CQ03787 373 aa2.13□□□□□ -2.07
DPB3YBR278W SUE1Q06524 206 aa2.13□□□□□ -2.07
DPB3YBR278W YET3Q07451 203 aa2.13□□□□□ -2.07
DPB3YBR278W MCP1Q12106 302 aa2.13□□□□□ -2.07
DPB3YBR278W MHT1Q12525 324 aa2.13□□□□□ -2.07
DPB3YBR278W FKS1P38631 1876 aaKnown RBP2.12□□□□□ -2.07
DPB3YBR278W SIR2P06700 562 aa2.12□□□□□ -2.07
DPB3YBR278W RPL35AP0CX84 120 aaKnown RBP2.12□□□□□ -2.07
DPB3YBR278W RPL35BP0CX85 120 aaKnown RBP2.12□□□□□ -2.07
DPB3YBR278W SNF6P18888 332 aa2.12□□□□□ -2.07
DPB3YBR278W SKG1P36169 355 aa2.12□□□□□ -2.07
DPB3YBR278W YHR180WP38868 163 aa2.12□□□□□ -2.07
DPB3YBR278W POG1P40473 351 aa2.12□□□□□ -2.07
DPB3YBR278W AIF1P52923 378 aa2.12□□□□□ -2.07
DPB3YBR278W COS6P53344 381 aa2.12□□□□□ -2.07
DPB3YBR278W YNL184CP53876 108 aa2.12□□□□□ -2.07
DPB3YBR278W SWP1Q02795 286 aa2.12□□□□□ -2.07
DPB3YBR278W ARO80Q04052 950 aa2.12□□□□□ -2.07
DPB3YBR278W NEJ1Q06148 342 aa2.12□□□□□ -2.07
DPB3YBR278W NOC4Q06512 552 aaPredicted RBP2.12□□□□□ -2.07
DPB3YBR278W CMC2Q3E7A4 109 aa2.12□□□□□ -2.07
DPB3YBR278W IGO2Q9P305 131 aa2.12□□□□□ -2.07
DPB3YBR278W YIL177CP40434 1758 aa2.11□□□□□ -2.07
DPB3YBR278W YJL225CP40889 1758 aa2.11□□□□□ -2.07
DPB3YBR278W QCR6P00127 147 aa2.11□□□□□ -2.07
DPB3YBR278W GCY1P14065 312 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
DPB3YBR278W FBA1P14540 359 aaKnown RBP2.11□□□□□ -2.07
DPB3YBR278W BET1P22804 142 aa2.11□□□□□ -2.07
DPB3YBR278W PDS1P40316 373 aaPredicted RBP2.11□□□□□ -2.07
DPB3YBR278W UBC12P52491 188 aa2.11□□□□□ -2.07
DPB3YBR278W NRK1P53915 240 aa2.11□□□□□ -2.07
DPB3YBR278W SPG3Q04398 127 aaPredicted RBP2.11□□□□□ -2.07
DPB3YBR278W TSC3Q3E790 80 aa2.11□□□□□ -2.07
DPB3YBR278W YFR032C-BQ8TGU2 87 aa2.11□□□□□ -2.07
DPB3YBR278W GLE2P40066 365 aa2.1□□□□□ -2.07
DPB3YBR278W SNO1Q03144 224 aa2.1□□□□□ -2.07
DPB3YBR278W GIM5Q04493 163 aa2.1□□□□□ -2.07
DPB3YBR278W GRX8Q05926 109 aa2.1□□□□□ -2.07
DPB3YBR278W YLR036CQ07986 203 aa2.1□□□□□ -2.07
DPB3YBR278W YOL024WQ08172 172 aa2.1□□□□□ -2.07
DPB3YBR278W EMC6Q12431 108 aa2.1□□□□□ -2.07
DPB3YBR278W FAB1P34756 2278 aa2.1□□□□□ -2.07
DPB3YBR278W MBF1O14467 151 aaKnown RBP2.09□□□□□ -2.07
DPB3YBR278W URA5P13298 226 aaKnown RBP2.09□□□□□ -2.07
DPB3YBR278W RPB3P16370 318 aaKnown RBP2.09□□□□□ -2.07
DPB3YBR278W CNB1P25296 175 aa2.09□□□□□ -2.07
DPB3YBR278W MEI4P29467 408 aa2.09□□□□□ -2.07
DPB3YBR278W MDH3P32419 343 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
DPB3YBR278W UTR5P32630 166 aa2.09□□□□□ -2.07
DPB3YBR278W YOR062CP36025 268 aa2.09□□□□□ -2.07
DPB3YBR278W ECM4P36156 370 aa2.09□□□□□ -2.07
DPB3YBR278W PGD1P40356 397 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms