RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W RFA1P22336 621 aaKnown RBP4.72□□□□□ -1.65
SHM1YBR263W RFA3P26755 122 aaKnown RBP4.72□□□□□ -1.65
SHM1YBR263W LNP1P38878 278 aa4.72□□□□□ -1.65
SHM1YBR263W SLM1P40485 686 aa4.72□□□□□ -1.65
SHM1YBR263W GNA1P43577 159 aaPredicted RBP4.72□□□□□ -1.65
SHM1YBR263W NCA3P46955 337 aa4.72□□□□□ -1.65
SHM1YBR263W MRX5P47007 382 aa4.72□□□□□ -1.65
SHM1YBR263W BNA2P47125 453 aa4.72□□□□□ -1.65
SHM1YBR263W UTP15Q04305 513 aaKnown RBP4.72□□□□□ -1.65
SHM1YBR263W YMR254CQ04838 102 aa4.72□□□□□ -1.65
SHM1YBR263W RTR2Q12378 196 aa4.72□□□□□ -1.65
SHM1YBR263W TDH2P00358 332 aaKnown RBP4.71□□□□□ -1.66
SHM1YBR263W AAC1P04710 309 aa4.71□□□□□ -1.66
SHM1YBR263W YLL053CP0CD98 152 aa4.71□□□□□ -1.66
SHM1YBR263W PET54P10834 293 aa4.71□□□□□ -1.66
SHM1YBR263W CAP2P13517 287 aa4.71□□□□□ -1.66
SHM1YBR263W HMX1P32339 317 aa4.71□□□□□ -1.66
SHM1YBR263W RNP1P32385 249 aa4.71□□□□□ -1.66
SHM1YBR263W MSS1P32559 526 aaPredicted RBP4.71□□□□□ -1.66
SHM1YBR263W RPD3P32561 433 aa4.71□□□□□ -1.66
SHM1YBR263W FIG1P38224 298 aa4.71□□□□□ -1.66
SHM1YBR263W PRS2P38620 318 aaKnown RBP4.71□□□□□ -1.66
SHM1YBR263W LSM4P40070 187 aaKnown RBP4.71□□□□□ -1.66
SHM1YBR263W SGN1P40561 250 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
SHM1YBR263W YIR020CP40575 100 aa4.71□□□□□ -1.66
SHM1YBR263W LSM7P53905 115 aaKnown RBP4.71□□□□□ -1.66
SHM1YBR263W YPL067CQ02754 198 aa4.71□□□□□ -1.66
SHM1YBR263W CAC2Q04199 468 aa4.71□□□□□ -1.66
SHM1YBR263W RTT103Q05543 409 aa4.71□□□□□ -1.66
SHM1YBR263W PEX10Q05568 337 aa4.71□□□□□ -1.66
SHM1YBR263W YLR031WQ07978 186 aa4.71□□□□□ -1.66
SHM1YBR263W FRE8Q12209 686 aa4.71□□□□□ -1.66
SHM1YBR263W YOR029WQ12243 111 aa4.71□□□□□ -1.66
SHM1YBR263W YCL048W-AQ2V2Q2 79 aa4.71□□□□□ -1.66
SHM1YBR263W SPO24Q3E752 67 aa4.71□□□□□ -1.66
SHM1YBR263W FUS3P16892 353 aaKnown RBP4.7□□□□□ -1.66
SHM1YBR263W IFM1P25038 676 aa4.7□□□□□ -1.66
SHM1YBR263W YCR101CP25607 182 aa4.7□□□□□ -1.66
SHM1YBR263W HYM1P32464 399 aa4.7□□□□□ -1.66
SHM1YBR263W YUH1P35127 236 aa4.7□□□□□ -1.66
SHM1YBR263W YHL044WP38727 235 aa4.7□□□□□ -1.66
SHM1YBR263W CCS1P40202 249 aaKnown RBP4.7□□□□□ -1.66
SHM1YBR263W CIN5P40917 295 aa4.7□□□□□ -1.66
SHM1YBR263W LOC1P43586 204 aaPredicted RBP4.7□□□□□ -1.66
SHM1YBR263W GEP7P53171 287 aa4.7□□□□□ -1.66
SHM1YBR263W PRM15Q03262 622 aa4.7□□□□□ -1.66
SHM1YBR263W DPB4Q04603 196 aaKnown RBP4.7□□□□□ -1.66
SHM1YBR263W UPS1Q05776 175 aa4.7□□□□□ -1.66
SHM1YBR263W AEP3Q12089 606 aa4.7□□□□□ -1.66
SHM1YBR263W RDL1Q12305 139 aaKnown RBP4.7□□□□□ -1.66
SHM1YBR263W TMA17Q12513 150 aa4.7□□□□□ -1.66
SHM1YBR263W YMR105W-AQ8TGS8 64 aa4.7□□□□□ -1.66
SHM1YBR263W URA2P07259 2214 aaKnown RBP4.7□□□□□ -1.66
SHM1YBR263W APA2P22108 325 aa4.69□□□□□ -1.66
SHM1YBR263W YCP4P25349 247 aaKnown RBP4.69□□□□□ -1.66
SHM1YBR263W OCH1P31755 480 aa4.69□□□□□ -1.66
SHM1YBR263W ERG3P32353 365 aa4.69□□□□□ -1.66
SHM1YBR263W SWD3P38123 315 aa4.69□□□□□ -1.66
SHM1YBR263W YKE4P40544 346 aa4.69□□□□□ -1.66
SHM1YBR263W AIM25P47140 327 aa4.69□□□□□ -1.66
SHM1YBR263W YDL183CP48569 320 aa4.69□□□□□ -1.66
SHM1YBR263W ARO8P53090 500 aaKnown RBP4.69□□□□□ -1.66
SHM1YBR263W YOR385WQ08909 290 aa4.69□□□□□ -1.66
SHM1YBR263W ENV7Q12003 364 aa4.69□□□□□ -1.66
SHM1YBR263W GEP5Q12393 293 aa4.69□□□□□ -1.66
SHM1YBR263W URA3P03962 267 aa4.69□□□□□ -1.66
SHM1YBR263W YCR016WP25617 290 aaKnown RBP4.69□□□□□ -1.66
SHM1YBR263W FMT1P32785 401 aa4.69□□□□□ -1.66
SHM1YBR263W NPL6P32832 435 aa4.69□□□□□ -1.66
SHM1YBR263W YKL069WP36088 180 aa4.69□□□□□ -1.66
SHM1YBR263W MRPL27P36526 146 aaPredicted RBP4.69□□□□□ -1.66
SHM1YBR263W SMM1P53720 384 aaKnown RBP4.69□□□□□ -1.66
SHM1YBR263W YNR064CP53750 290 aa4.69□□□□□ -1.66
SHM1YBR263W YOR192C-CQ3E736 78 aa4.69□□□□□ -1.66
SHM1YBR263W ATG40Q99325 256 aa4.69□□□□□ -1.66
SHM1YBR263W RPB7P34087 171 aa4.68□□□□□ -1.66
SHM1YBR263W FLO10P36170 1169 aa4.68□□□□□ -1.66
SHM1YBR263W RTS2P40962 232 aa4.68□□□□□ -1.66
SHM1YBR263W PIR5P46999 287 aa4.68□□□□□ -1.66
SHM1YBR263W YJR011CP47086 261 aaPredicted RBP4.68□□□□□ -1.66
SHM1YBR263W XPT1P47165 209 aa4.68□□□□□ -1.66
SHM1YBR263W YGL117WP53133 265 aa4.68□□□□□ -1.66
SHM1YBR263W HSK3P69852 69 aa4.68□□□□□ -1.66
SHM1YBR263W YML018CQ03730 393 aa4.68□□□□□ -1.66
SHM1YBR263W LIP2Q06005 328 aa4.68□□□□□ -1.66
SHM1YBR263W DXO1Q06349 442 aa4.68□□□□□ -1.66
SHM1YBR263W NDE2Q07500 545 aa4.68□□□□□ -1.66
SHM1YBR263W CSI2Q08054 341 aa4.68□□□□□ -1.66
SHM1YBR263W YOL118CQ08259 102 aa4.68□□□□□ -1.66
SHM1YBR263W RFM1Q12192 310 aa4.68□□□□□ -1.66
SHM1YBR263W BBP1Q12365 385 aa4.68□□□□□ -1.66
SHM1YBR263W SPS2P08459 502 aa4.67□□□□□ -1.66
SHM1YBR263W CDC23P16522 626 aa4.67□□□□□ -1.66
SHM1YBR263W BUD23P25627 275 aaPredicted RBP4.67□□□□□ -1.66
SHM1YBR263W GPI18P38211 433 aa4.67□□□□□ -1.66
SHM1YBR263W NTC20P38302 140 aaPredicted RBP4.67□□□□□ -1.66
SHM1YBR263W LSM12P38828 187 aaKnown RBP4.67□□□□□ -1.66
SHM1YBR263W YIL077CP40508 320 aa4.67□□□□□ -1.66
SHM1YBR263W YHC3P47040 408 aa4.67□□□□□ -1.66
SHM1YBR263W DIE2P50076 525 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms