RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W AUR1P36107 401 aaPredicted RBP0.36□□□□□ -2.35
UTP20YBL004W OLA1P38219 394 aaKnown RBP0.36□□□□□ -2.35
UTP20YBL004W HAC1P41546 238 aa0.36□□□□□ -2.35
UTP20YBL004W CAT5P41735 233 aa0.36□□□□□ -2.35
UTP20YBL004W IRC18P47056 224 aa0.36□□□□□ -2.35
UTP20YBL004W YAP1802P53309 568 aa0.36□□□□□ -2.35
UTP20YBL004W PXR1P53335 271 aaPredicted RBP0.36□□□□□ -2.35
UTP20YBL004W HLR1Q04429 423 aa0.36□□□□□ -2.35
UTP20YBL004W MCT1Q12283 360 aa0.36□□□□□ -2.35
UTP20YBL004W TAR1Q8TGM6 124 aa0.36□□□□□ -2.35
UTP20YBL004W YER039C-AP0CD97 72 aa0.36□□□□□ -2.35
UTP20YBL004W RPB3P16370 318 aaKnown RBP0.36□□□□□ -2.35
UTP20YBL004W RFC3P38629 340 aa0.36□□□□□ -2.35
UTP20YBL004W YML6P51998 286 aa0.36□□□□□ -2.35
UTP20YBL004W MRH4P53166 561 aa0.36□□□□□ -2.35
UTP20YBL004W LPP1Q04396 274 aa0.36□□□□□ -2.35
UTP20YBL004W YLR224WQ05947 369 aa0.36□□□□□ -2.35
UTP20YBL004W FRE5Q08908 694 aa0.36□□□□□ -2.35
UTP20YBL004W YOR289WQ12012 251 aaPredicted RBP0.36□□□□□ -2.35
UTP20YBL004W PHO13P19881 312 aa0.36□□□□□ -2.35
UTP20YBL004W MSS1P32559 526 aaPredicted RBP0.36□□□□□ -2.35
UTP20YBL004W MCH2P36032 473 aa0.36□□□□□ -2.35
UTP20YBL004W COS9P36034 407 aa0.36□□□□□ -2.35
UTP20YBL004W SRP102P36057 244 aaPredicted RBP0.36□□□□□ -2.35
UTP20YBL004W BIG1P38813 335 aa0.36□□□□□ -2.35
UTP20YBL004W IAH1P41734 238 aa0.36□□□□□ -2.35
UTP20YBL004W BNA7Q04066 261 aa0.36□□□□□ -2.35
UTP20YBL004W BTS1Q12051 335 aa0.36□□□□□ -2.35
UTP20YBL004W UTP23Q12339 254 aaKnown RBP0.36□□□□□ -2.35
UTP20YBL004W MRP1P10662 321 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W YCR043CP25361 127 aa0.35□□□□□ -2.35
UTP20YBL004W ARO7P32178 256 aa0.35□□□□□ -2.35
UTP20YBL004W YUH1P35127 236 aa0.35□□□□□ -2.35
UTP20YBL004W SDH8P38345 138 aa0.35□□□□□ -2.35
UTP20YBL004W DOG2P38773 246 aa0.35□□□□□ -2.35
UTP20YBL004W DOG1P38774 246 aa0.35□□□□□ -2.35
UTP20YBL004W RIO2P40160 425 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W PIR5P46999 287 aa0.35□□□□□ -2.35
UTP20YBL004W SCW4P53334 386 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W YNL181WP53878 407 aa0.35□□□□□ -2.35
UTP20YBL004W RTN2Q12443 393 aa0.35□□□□□ -2.35
UTP20YBL004W YGL041C-BQ3E750 60 aa0.35□□□□□ -2.35
UTP20YBL004W SSN8P47821 323 aa0.35□□□□□ -2.35
UTP20YBL004W MIC26P50087 233 aa0.35□□□□□ -2.35
UTP20YBL004W ALG9P53868 555 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W VMA4P22203 233 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W MRPL25P23369 157 aa0.35□□□□□ -2.35
UTP20YBL004W GIT1P25346 518 aa0.35□□□□□ -2.35
UTP20YBL004W NTG1P31378 399 aa0.35□□□□□ -2.35
UTP20YBL004W ACP1P32463 125 aa0.35□□□□□ -2.35
UTP20YBL004W RIB5P38145 238 aa0.35□□□□□ -2.35
UTP20YBL004W HMS2P47175 358 aa0.35□□□□□ -2.35
UTP20YBL004W SRL4Q03085 281 aa0.35□□□□□ -2.35
UTP20YBL004W NPC2Q12408 173 aa0.35□□□□□ -2.35
UTP20YBL004W TMA7Q3E764 64 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W MSS18P08593 268 aa0.35□□□□□ -2.35
UTP20YBL004W YCR025CP25352 136 aa0.35□□□□□ -2.35
UTP20YBL004W YNL122CP53921 115 aaPredicted RBP0.35□□□□□ -2.35
UTP20YBL004W YDR286CQ05530 114 aa0.35□□□□□ -2.35
UTP20YBL004W NOP56Q12460 504 aaKnown RBP RIP-Chip data0.35□□□□□ -2.35not detected
UTP20YBL004W IFM1P25038 676 aa0.35□□□□□ -2.35
UTP20YBL004W IMD2P38697 523 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W FCY21P40039 528 aa0.35□□□□□ -2.35
UTP20YBL004W IMD3P50095 523 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W CAF40P53829 373 aa0.35□□□□□ -2.35
UTP20YBL004W KSH1Q8TGJ3 72 aa0.35□□□□□ -2.35
UTP20YBL004W PET54P10834 293 aa0.35□□□□□ -2.35
UTP20YBL004W RCN1P36054 211 aa0.35□□□□□ -2.35
UTP20YBL004W POP4P38336 279 aa0.35□□□□□ -2.35
UTP20YBL004W SSZ1P38788 538 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W YAR029WP39549 74 aa0.35□□□□□ -2.35
UTP20YBL004W SSP120P39931 234 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W MPC1P53157 130 aaKnown RBP0.35□□□□□ -2.35
UTP20YBL004W MEU1Q07938 337 aaKnown RBP RIP-Chip data0.35□□□□□ -2.35not detected
UTP20YBL004W HMS1Q12398 434 aa0.35□□□□□ -2.35
UTP20YBL004W QDR3P38227 689 aa0.34□□□□□ -2.35
UTP20YBL004W GEP4P38812 185 aa0.34□□□□□ -2.35
UTP20YBL004W THI74Q04083 370 aa0.34□□□□□ -2.35
UTP20YBL004W VBA1Q04301 562 aa0.34□□□□□ -2.35
UTP20YBL004W YPD1Q07688 167 aa0.34□□□□□ -2.35
UTP20YBL004W YKL068W-AQ3E826 78 aa0.34□□□□□ -2.35
UTP20YBL004W YJR011CP47086 261 aaPredicted RBP0.34□□□□□ -2.35
UTP20YBL004W YIP3P53633 176 aa0.34□□□□□ -2.35
UTP20YBL004W YNL033WP53964 284 aa0.34□□□□□ -2.35
UTP20YBL004W CTF19Q02732 369 aa0.34□□□□□ -2.35
UTP20YBL004W SNX3Q08826 162 aaKnown RBP0.34□□□□□ -2.35
UTP20YBL004W VPS63O13549 108 aa0.34□□□□□ -2.35
UTP20YBL004W VAR1P02381 398 aa0.34□□□□□ -2.35
UTP20YBL004W YEL045CP32616 141 aa0.34□□□□□ -2.35
UTP20YBL004W MRPL27P36526 146 aaPredicted RBP0.34□□□□□ -2.35
UTP20YBL004W NTC20P38302 140 aaPredicted RBP0.34□□□□□ -2.35
UTP20YBL004W SIC1P38634 284 aa0.34□□□□□ -2.35
UTP20YBL004W SAS2P40963 338 aa0.34□□□□□ -2.35
UTP20YBL004W TWF1P53250 332 aa0.34□□□□□ -2.35
UTP20YBL004W SPC2Q04969 178 aa0.34□□□□□ -2.35
UTP20YBL004W YDL241WQ07738 123 aa0.34□□□□□ -2.35
UTP20YBL004W ACM1Q08981 209 aa0.34□□□□□ -2.35
UTP20YBL004W PRP21P32524 280 aaPredicted RBP0.34□□□□□ -2.36
UTP20YBL004W NNK1P36003 928 aa0.34□□□□□ -2.36
UTP20YBL004W TIM21P53220 239 aa0.34□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms