RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W GWT1P47026 490 aa2.93□□□□□ -1.94
NUP60YAR002W SRB7P47822 140 aa2.93□□□□□ -1.94
NUP60YAR002W PNC1P53184 216 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W MRP51Q02950 344 aa2.93□□□□□ -1.94
NUP60YAR002W COQ11Q05892 277 aa2.93□□□□□ -1.94
NUP60YAR002W RRT7Q07829 113 aa2.93□□□□□ -1.94
NUP60YAR002W USB1Q12208 290 aaKnown RBP2.93□□□□□ -1.94
NUP60YAR002W MED4Q12343 284 aa2.93□□□□□ -1.94
NUP60YAR002W HUT1Q12520 339 aa2.93□□□□□ -1.94
NUP60YAR002W YHR213W-AQ8TGT4 77 aa2.93□□□□□ -1.94
NUP60YAR002W ISN1Q99312 450 aa2.93□□□□□ -1.94
NUP60YAR002W RPL7AP05737 244 aaKnown RBP2.92□□□□□ -1.94
NUP60YAR002W CBP6P07253 162 aaPredicted RBP2.92□□□□□ -1.94
NUP60YAR002W YLL053CP0CD98 152 aa2.92□□□□□ -1.94
NUP60YAR002W UBI4P0CG63 381 aaKnown RBP2.92□□□□□ -1.94
NUP60YAR002W RPL40AP0CH08 128 aaKnown RBP2.92□□□□□ -1.94
NUP60YAR002W RPL40BP0CH09 128 aaKnown RBP2.92□□□□□ -1.94
NUP60YAR002W MIR1P23641 311 aaKnown RBP2.92□□□□□ -1.94
NUP60YAR002W PEX4P29340 183 aa2.92□□□□□ -1.94
NUP60YAR002W CBT1P36038 271 aaPredicted RBP2.92□□□□□ -1.94
NUP60YAR002W FIG1P38224 298 aa2.92□□□□□ -1.94
NUP60YAR002W PET100P38958 111 aa2.92□□□□□ -1.94
NUP60YAR002W YIL169CP40442 995 aa2.92□□□□□ -1.94
NUP60YAR002W SNN1P48232 102 aa2.92□□□□□ -1.94
NUP60YAR002W UFD1P53044 361 aa2.92□□□□□ -1.94
NUP60YAR002W CWC25P53854 179 aaKnown RBP2.92□□□□□ -1.94
NUP60YAR002W MRPL19P53875 158 aa2.92□□□□□ -1.94
NUP60YAR002W YPL108WQ02872 168 aaPredicted RBP2.92□□□□□ -1.94
NUP60YAR002W THI74Q04083 370 aa2.92□□□□□ -1.94
NUP60YAR002W CAC2Q04199 468 aa2.92□□□□□ -1.94
NUP60YAR002W RPL7BQ12213 244 aaKnown RBP2.92□□□□□ -1.94
NUP60YAR002W YCT1Q12235 531 aa2.92□□□□□ -1.94
NUP60YAR002W YDL180WQ12301 547 aa2.92□□□□□ -1.94
NUP60YAR002W IZH2Q12442 317 aa2.92□□□□□ -1.94
NUP60YAR002W YLR146W-AQ2V2P1 62 aa2.92□□□□□ -1.94
NUP60YAR002W Q0144Q9ZZW2 109 aa2.92□□□□□ -1.94
NUP60YAR002W IRA2P19158 3079 aa2.92□□□□□ -1.94
NUP60YAR002W RIP1P08067 215 aa2.91□□□□□ -1.94
NUP60YAR002W ZRC1P20107 442 aa2.91□□□□□ -1.94
NUP60YAR002W OLE1P21147 510 aaKnown RBP2.91□□□□□ -1.94
NUP60YAR002W CNB1P25296 175 aa2.91□□□□□ -1.94
NUP60YAR002W LDB16P25587 256 aa2.91□□□□□ -1.94
NUP60YAR002W DEG1P31115 442 aaKnown RBP2.91□□□□□ -1.94
NUP60YAR002W ECM25P32525 599 aa2.91□□□□□ -1.94
NUP60YAR002W SRB6P32570 121 aa2.91□□□□□ -1.94
NUP60YAR002W GLC7P32598 312 aaKnown RBP2.91□□□□□ -1.94
NUP60YAR002W REC114P32841 428 aa2.91□□□□□ -1.94
NUP60YAR002W MRPL39P36533 70 aa2.91□□□□□ -1.94
NUP60YAR002W RPL13BP40212 199 aaKnown RBP2.91□□□□□ -1.94
NUP60YAR002W SSN8P47821 323 aa2.91□□□□□ -1.94
NUP60YAR002W ERV25P54837 211 aaKnown RBP2.91□□□□□ -1.94
NUP60YAR002W ODC1Q03028 310 aa2.91□□□□□ -1.94
NUP60YAR002W EST3Q03096 181 aa2.91□□□□□ -1.94
NUP60YAR002W ERP1Q05359 219 aaKnown RBP2.91□□□□□ -1.94
NUP60YAR002W HRI1Q05905 244 aaKnown RBP2.91□□□□□ -1.94
NUP60YAR002W BER1Q06688 274 aaKnown RBP2.91□□□□□ -1.94
NUP60YAR002W RFU1Q08003 200 aa2.91□□□□□ -1.94
NUP60YAR002W YOR186WQ08560 144 aa2.91□□□□□ -1.94
NUP60YAR002W FCF2Q12035 217 aaPredicted RBP2.91□□□□□ -1.94
NUP60YAR002W RPL13AQ12690 199 aaPredicted RBP2.91□□□□□ -1.94
NUP60YAR002W YER175W-AQ8TGU4 54 aa2.91□□□□□ -1.94
NUP60YAR002W ARO3P14843 370 aaKnown RBP2.9□□□□□ -1.94
NUP60YAR002W CKA1P15790 372 aa2.9□□□□□ -1.94
NUP60YAR002W SAG1P20840 650 aa2.9□□□□□ -1.94
NUP60YAR002W LDS1P31379 325 aa2.9□□□□□ -1.94
NUP60YAR002W OCH1P31755 480 aa2.9□□□□□ -1.94
NUP60YAR002W VMA8P32610 256 aaKnown RBP2.9□□□□□ -1.94
NUP60YAR002W MCH2P36032 473 aa2.9□□□□□ -1.94
NUP60YAR002W ARC40P38328 384 aaKnown RBP2.9□□□□□ -1.94
NUP60YAR002W MTC6P38849 526 aa2.9□□□□□ -1.94
NUP60YAR002W GPI16P38875 610 aa2.9□□□□□ -1.94
NUP60YAR002W AGX1P43567 385 aa2.9□□□□□ -1.94
NUP60YAR002W IKS1P47042 667 aa2.9□□□□□ -1.94
NUP60YAR002W MCM22P47167 239 aa2.9□□□□□ -1.94
NUP60YAR002W PKP2P53170 491 aa2.9□□□□□ -1.94
NUP60YAR002W SLX9P53251 210 aaPredicted RBP2.9□□□□□ -1.94
NUP60YAR002W GPI15P53961 229 aa2.9□□□□□ -1.94
NUP60YAR002W VPS28Q02767 242 aa2.9□□□□□ -1.94
NUP60YAR002W RSM10Q03201 203 aa2.9□□□□□ -1.94
NUP60YAR002W YDR391CQ04170 232 aa2.9□□□□□ -1.94
NUP60YAR002W YDR286CQ05530 114 aa2.9□□□□□ -1.94
NUP60YAR002W YBR255C-AQ3E776 120 aa2.9□□□□□ -1.94
NUP60YAR002W VMA9Q3E7B6 73 aa2.9□□□□□ -1.94
NUP60YAR002W YLR365WQ7LIF2 110 aa2.9□□□□□ -1.94
NUP60YAR002W IRA1P18963 3092 aa2.9□□□□□ -1.95
NUP60YAR002W RPL25P04456 142 aaKnown RBP2.9□□□□□ -1.95
NUP60YAR002W SPS4P09937 338 aa2.9□□□□□ -1.95
NUP60YAR002W SEC62P21825 274 aa2.9□□□□□ -1.95
NUP60YAR002W YCR101CP25607 182 aa2.9□□□□□ -1.95
NUP60YAR002W ERG2P32352 222 aa2.9□□□□□ -1.95
NUP60YAR002W MRPS5P33759 307 aa2.9□□□□□ -1.95
NUP60YAR002W RPB7P34087 171 aa2.9□□□□□ -1.95
NUP60YAR002W SWD2P36104 329 aaPredicted RBP2.9□□□□□ -1.95
NUP60YAR002W ERV15P38312 142 aa2.9□□□□□ -1.95
NUP60YAR002W POP2P39008 433 aa2.9□□□□□ -1.95
NUP60YAR002W YEA6P39953 335 aa2.9□□□□□ -1.95
NUP60YAR002W YER079WP40052 210 aaKnown RBP2.9□□□□□ -1.95
NUP60YAR002W YER084WP40057 128 aa2.9□□□□□ -1.95
NUP60YAR002W CCS1P40202 249 aaKnown RBP2.9□□□□□ -1.95
NUP60YAR002W XBP1P40489 647 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms