RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	SSH1	P38353	490 aa	Known RBP	3.12	□□□□□ -1.91
YAL004W	YAL004W	BDH1	P39714	382 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	VPS52	P39904	641 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	YER076C	P40049	302 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	STB1	P42845	420 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	SNX4	P47057	423 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	MOG1	P47123	218 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	OST3	P48439	350 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	NBP35	P52920	328 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	MPC1	P53157	130 aa	Known RBP	3.12	□□□□□ -1.91
YAL004W	YAL004W	POP6	P53218	158 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	PDR17	P53844	350 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	YMR279C	Q03263	540 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	TDA1	Q03533	586 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	YMR315W	Q04869	349 aa	Known RBP	3.12	□□□□□ -1.91
YAL004W	YAL004W	YPR127W	Q06494	345 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	YPD1	Q07688	167 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	RPN8	Q08723	338 aa	Known RBP	3.12	□□□□□ -1.91
YAL004W	YAL004W	MMT2	Q08970	484 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	YOR283W	Q12040	230 aa	Known RBP	3.12	□□□□□ -1.91
YAL004W	YAL004W	YLR050C	Q12155	161 aa	Known RBP	3.12	□□□□□ -1.91
YAL004W	YAL004W	USB1	Q12208	290 aa	Known RBP	3.12	□□□□□ -1.91
YAL004W	YAL004W	AGC1	Q12482	902 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	YCR024C-B	Q3E7Z8	88 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	SPT15	P13393	240 aa	Known RBP	3.11	□□□□□ -1.91
YAL004W	YAL004W	IDP1	P21954	428 aa	Known RBP	3.11	□□□□□ -1.91
YAL004W	YAL004W	SEC22	P22214	214 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	YMC1	P32331	307 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	SPT14	P32363	452 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	TCA17	P32613	152 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	ALK2	P32789	676 aa	Predicted RBP	3.11	□□□□□ -1.91
YAL004W	YAL004W	SFC1	P33303	322 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	CPR5	P35176	225 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	MRPL28	P36527	147 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	MBA1	P38300	278 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	MED6	P38782	295 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	MTC6	P38849	526 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	MRPL49	P40858	161 aa	Predicted RBP	3.11	□□□□□ -1.91
YAL004W	YAL004W	YAE1	P47118	141 aa	Predicted RBP	3.11	□□□□□ -1.91
YAL004W	YAL004W	MCM22	P47167	239 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	TPN1	P53099	579 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	PEX30	Q06169	523 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	YPR091C	Q06833	770 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	MRX9	Q07349	420 aa	Known RBP	3.11	□□□□□ -1.91
YAL004W	YAL004W	RRP40	Q08285	240 aa	Known RBP	3.11	□□□□□ -1.91
YAL004W	YAL004W	THP3	Q12049	470 aa	Known RBP	3.11	□□□□□ -1.91
YAL004W	YAL004W	ERV2	Q12284	196 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	PCL9	Q12477	304 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	PRM4	Q12498	284 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	NAG1	Q8TGN9	163 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	TAO3	P40468	2376 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	RIF1	P29539	1916 aa		3.11	□□□□□ -1.91
YAL004W	YAL004W	YAL064W-B	O13512	126 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	RPN13	O13563	156 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	DSF1	P0CX08	502 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	YNR073C	P0CX09	502 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	NHP6A	P11632	93 aa	Known RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	STF2	P16965	84 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	PET9	P18239	318 aa	Known RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	RPB5	P20434	215 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	DBF2	P22204	572 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	CAM1	P29547	415 aa	Known RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	GLC7	P32598	312 aa	Known RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	YOR062C	P36025	268 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	AVT5	P38176	459 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	ECM33	P38248	429 aa	Known RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	LEU5	P38702	357 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	MDM31	P38880	579 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	COX14	P39103	70 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	YMR144W	P40214	342 aa	Known RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	YJL218W	P40892	196 aa	Known RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	RTS2	P40962	232 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	AZF1	P41696	914 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	MDV1	P47025	714 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	COQ5	P49017	307 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	AVT4	P50944	713 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	ORM1	P53224	222 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	COS1	P53822	381 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	SWS2	P53937	143 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	TPS1	Q00764	495 aa	Known RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	GRX5	Q02784	150 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	MAK3	Q03503	176 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	AIM34	Q03673	198 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	GMC1	Q04399	608 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	RFU1	Q08003	200 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	COQ10	Q08058	207 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	YOR289W	Q12012	251 aa	Predicted RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	BBP1	Q12365	385 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	YLR111W	Q12528	110 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	FOL3	Q12676	427 aa	Predicted RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	HTZ1	Q12692	134 aa	Known RBP	3.1	□□□□□ -1.91
YAL004W	YAL004W	YDR034W-B	Q6Q5X2	51 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	IGO2	Q9P305	131 aa		3.1	□□□□□ -1.91
YAL004W	YAL004W	PIS1	P06197	220 aa	Known RBP	3.09	□□□□□ -1.91
YAL004W	YAL004W	GCN3	P14741	305 aa		3.09	□□□□□ -1.91
YAL004W	YAL004W	AIM17	P23180	465 aa	Known RBP	3.09	□□□□□ -1.91
YAL004W	YAL004W	PRE7	P23724	241 aa	Known RBP	3.09	□□□□□ -1.91
YAL004W	YAL004W	AGA1	P32323	725 aa		3.09	□□□□□ -1.91
YAL004W	YAL004W	SUI1	P32911	108 aa	Known RBP	3.09	□□□□□ -1.91
YAL004W	YAL004W	ZRT3	P34240	503 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms