RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CDV3Q9UKY7 258 aaKnown RBP10.98□□□□□ -0.65
PHGDH-222ENST00000641587 CFAP47Q6ZTR5 3102 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 ACKR2O00590 384 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 SEC24AO95486 1093 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 OR52Z1P0C646 297 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 TDGF1P13385 188 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 GJA1P17302 382 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 PTMSP20962 102 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 MAGEA9P43362 315 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 RPS9P46781 194 aaKnown RBP10.97□□□□□ -0.65
PHGDH-222ENST00000641587 ATP2C1P98194 919 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-222ENST00000641587 ADCY1Q08828 1119 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 PTPAQ15257 358 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 UPP1Q16831 310 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 FAM78AQ5JUQ0 283 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 PADI6Q6TGC4 694 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 ZNF852Q6ZMS4 543 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 KRI1Q8N9T8 703 aaKnown RBP10.97□□□□□ -0.65
PHGDH-222ENST00000641587 DEPTORQ8TB45 409 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 ELSPBP1Q96BH3 223 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 ZSWIM3Q96MP5 696 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 BACE2Q9Y5Z0 518 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.97□□□□□ -0.65
PHGDH-222ENST00000641587 ACACBO00763 2458 aa10.97□□□□□ -0.65
PHGDH-222ENST00000641587 KMT2BQ9UMN6 2715 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-222ENST00000641587 ARHGEF37A1IGU5 675 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 ARHGEF35A5YM69 484 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 LAD1O00515 517 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 PRRG1O14668 218 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 PPP6R2O75170 966 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 LRG1P02750 347 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 XRCC6P12956 609 aaKnown RBP eCLIP10.96□□□□□ -0.655e-6■■□□□ 11.5
PHGDH-222ENST00000641587 HOXC13P31276 330 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 NAMPTP43490 491 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 OSTNP61366 133 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 DMWDQ09019 674 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 SPEM2Q0P670 501 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 GAS6Q14393 721 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 ECM1Q16610 540 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 DCAF4L1Q3SXM0 396 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 ATF7IP2Q5U623 682 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 VITQ6UXI7 678 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 ANKS3Q6ZW76 656 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 ZMAT2Q96NC0 199 aaKnown RBP10.96□□□□□ -0.65
PHGDH-222ENST00000641587 ASB16Q96NS5 453 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 CHRDQ9H2X0 955 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 BRD9Q9H8M2 597 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 CYP4F11Q9HBI6 524 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 TUFT1Q9NNX1 390 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 GDE1Q9NZC3 331 aa10.96□□□□□ -0.65
PHGDH-222ENST00000641587 MAP1BP46821 2468 aaKnown RBP10.96□□□□□ -0.66
PHGDH-222ENST00000641587 CITO14578 2027 aa10.96□□□□□ -0.66
PHGDH-222ENST00000641587 PDCD11Q14690 1871 aaKnown RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 SMIM28A0A1B0GU29 152 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 VWA3AA6NCI4 1184 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 PODXLO00592 558 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 NCAM2O15394 837 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 MEFVO15553 781 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 TBC1D4O60343 1298 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 CUTAO60888 179 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 GADD45BO75293 160 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 MOSPD3O75425 235 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 ABLIM3O94929 683 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 PTPN2P17706 415 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 CYP11B2P19099 503 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 GDI1P31150 447 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 ELF1P32519 619 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 VIPR2P41587 438 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 UBE2HP62256 183 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 SATB1Q01826 763 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 LMNB2Q03252 620 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 SRSF5Q13243 272 aaKnown RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 ARL6IP4Q66PJ3 421 aaKnown RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 SLC8B1Q6J4K2 584 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 DTHD1Q6ZMT9 781 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 PRR23BQ6ZRT6 265 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 ZNF461Q8TAF7 563 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 DNASE1L2Q92874 299 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 SECISBP2LQ93073 1101 aaKnown RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 C18orf25Q96B23 403 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 NACC1Q96RE7 527 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 NELL2Q99435 816 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 CDT1Q9H211 546 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 ZFP14Q9HCL3 533 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 ZNF334Q9HCZ1 680 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 AVENQ9NQS1 362 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 LMBRD1Q9NUN5 540 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 FBXO2Q9UK22 296 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 GMEB2Q9UKD1 530 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 PCDHA7Q9UN72 937 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 MRPS17Q9Y2R5 130 aaKnown RBP10.95□□□□□ -0.66
PHGDH-222ENST00000641587 INSL5Q9Y5Q6 135 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 RALGAPA1Q6GYQ0 2036 aa10.95□□□□□ -0.66
PHGDH-222ENST00000641587 HARSP12081 509 aaKnown RBP10.94□□□□□ -0.66
PHGDH-222ENST00000641587 ATF2P15336 505 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 PRPHP41219 470 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 ZNF568Q3ZCX4 644 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 WDR44Q5JSH3 913 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 CCDC73Q6ZRK6 1079 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms