RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 EDRF1Q3B7T1 1238 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 ZCWPW2Q504Y3 356 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 C9orf57Q5W0N0 161 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 LMBRD2Q68DH5 695 aaPredicted RBP21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 KLHL10Q6JEL2 608 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 CD300LGQ6UXG3 332 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 TMEM174Q8WUU8 243 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 RIN2Q8WYP3 895 aaPredicted RBP21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 CCDC127Q96BQ5 260 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 CDCA3Q99618 268 aaPredicted RBP21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 TTPALQ9BTX7 342 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 EMILIN2Q9BXX0 1053 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 CHST7Q9NS84 486 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 PLXNA3P51805 1871 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 MTCL1Q9Y4B5 1905 aaKnown RBP21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 FSD2A1L4K1 749 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 NCK2O43639 380 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 CCNE1P24864 410 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 GTF2F1P35269 517 aaKnown RBP eCLIP21.25■□□□□ 0.991e-6■■■■■ 54.6
SHKBP1-214ENST00000597396 CASP4P49662 377 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 ADAM9Q13443 819 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 DUSP6Q16828 381 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 KIAA0319Q5VV43 1072 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 CENPPQ6IPU0 288 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 WDR49Q8IV35 697 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 DHTKD1Q96HY7 919 aaPredicted RBP21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 MFSD14AQ96MC6 490 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 CGRRF1Q99675 332 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 MTMR12Q9C0I1 747 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 INTS13Q9NVM9 706 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 CLDND1Q9NY35 253 aa21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 R3HCC1Q9Y3T6 440 aaKnown RBP21.25■□□□□ 0.99
SHKBP1-214ENST00000597396 ANO9A1A5B4 782 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 PPEF2O14830 753 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 CD44P16070 742 aaKnown RBP21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 BMP6P22004 513 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 LRRC63Q05C16 580 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 DUOXA2Q1HG44 320 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 RTP2Q5QGT7 225 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 PDXDC1Q6P996 788 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 DSTYKQ6XUX3 929 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 FAM84AQ96KN4 292 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 SUSD3Q96L08 255 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 ZNF560Q96MR9 790 aa21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 UHRF1Q96T88 793 aaPredicted RBP21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.24■□□□□ 0.99
SHKBP1-214ENST00000597396 TRIM49BA6NDI0 452 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 PPP1R3GB7ZBB8 358 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 PIRO00625 290 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 CETN3O15182 167 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 LILRB3O75022 631 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 ITGB3P05106 788 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 KRT19P08727 400 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 FGFR3P22607 806 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 TKTP29401 623 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 POLR2BP30876 1174 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 CREMQ03060 361 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 TFF2Q03403 129 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 PSMD5Q16401 504 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 ANKRD40Q6AI12 368 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 PRSS55Q6UWB4 352 aaPredicted RBP21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 GPR65Q8IYL9 337 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 FAM186BQ8IYM0 893 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 CSGALNACT2Q8N6G5 542 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 EFHBQ8N7U6 833 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 C1orf127Q8N9H9 656 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 OR5B17Q8NGF7 314 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 NELFBQ8WX92 580 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 PIK3R5Q8WYR1 880 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 HLA-CQ95604 372 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 PABPC5Q96DU9 382 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 KLHL5Q96PQ7 755 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 ITGA11Q9UKX5 1188 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 AGAP1Q9UPQ3 857 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 CTNND2Q9UQB3 1225 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 PTPRJQ12913 1337 aa21.23■□□□□ 0.99
SHKBP1-214ENST00000597396 TSC2P49815 1807 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 BICDL2A1A5D9 508 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 SYN3O14994 580 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 MAPK13O15264 365 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 CLASP2O75122 1294 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 ADH1AP07327 375 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 CNPP09543 421 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 KRT13P13646 458 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 PAX3P23760 479 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 KLRC2P26717 231 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 PSMC2P35998 433 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 TAF6P49848 677 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 PMS1P54277 932 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 LILRA4P59901 499 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 AAK1Q2M2I8 961 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 USP37Q86T82 979 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 POP1Q99575 1024 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 UBE2ZQ9H832 354 aaPredicted RBP21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 COG5Q9UP83 839 aa21.22■□□□□ 0.99
SHKBP1-214ENST00000597396 REV3LO60673 3130 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 LINC01565O15544 149 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 AKAP3O75969 853 aa21.21■□□□□ 0.99
SHKBP1-214ENST00000597396 SRGAP2BP0DMP2 458 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms