RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ZC3H3Q8IXZ2 948 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 C1orf127Q8N9H9 656 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 PARD3BQ8TEW8 1205 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 NELFBQ8WX92 580 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 ZNF516Q92618 1163 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 FNBP1Q96RU3 617 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 TSG101Q99816 390 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 DUSP9Q99956 384 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 NUB1Q9Y5A7 615 aa12.92□□□□□ -0.34
RABGGTA-218ENST00000560777 C2CD2LO14523 706 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 CETN3O15182 167 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 SPTLC1O15269 473 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 TRAPPC3O43617 180 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 TNNI1P19237 187 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 FGFR3P22607 806 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 PSMC2P35998 433 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 NRIP1P48552 1158 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 GLUD2P49448 558 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 AARSP49588 968 aaKnown RBP eCLIP12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 LILRA4P59901 499 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 MCCD1P59942 119 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 DLG4P78352 724 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 ELAVL2Q12926 359 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 RTP2Q5QGT7 225 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 KIAA1841Q6NSI8 718 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 TTI2Q6NXR4 508 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 CEP57Q86XR8 500 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 GPR65Q8IYL9 337 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 MLKLQ8NB16 471 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 LNX1Q8TBB1 728 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 BORCS6Q96GS4 357 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 ANKRD36BP1Q96IX9 119 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 SUSD3Q96L08 255 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 CGRRF1Q99675 332 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 TTPALQ9BTX7 342 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 MTMR12Q9C0I1 747 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 IGFLR1Q9H665 355 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 TLE6Q9H808 572 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 MRPL17Q9NRX2 175 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 SIX4Q9UIU6 781 aa12.91□□□□□ -0.34
RABGGTA-218ENST00000560777 PRUNE2Q8WUY3 3088 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 LRRIQ3A6PVS8 624 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 M0QZQ0 153 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 CST3P01034 146 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 TNNC2P02585 160 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 ITGB3P05106 788 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 URODP06132 367 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 CNPP09543 421 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 TMEM191BP0C7N4 346 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 TKTP29401 623 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 POLR2BP30876 1174 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 CA8P35219 290 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 VAMP7P51809 220 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 STX17P56962 302 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 NLRP12P59046 1061 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 PAK1Q13153 545 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 ADAM15Q13444 863 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 COL19A1Q14993 1142 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 DUSP6Q16828 381 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 C1orf220Q5T0J3 134 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 FOXR2Q6PJQ5 311 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 TRAPPC11Q7Z392 1133 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 FAM186BQ8IYM0 893 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 RIN2Q8WYP3 895 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 PPP2R3CQ969Q6 453 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 KLHL5Q96PQ7 755 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 MED15Q96RN5 788 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 MKNK1Q9BUB5 465 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 RXFP1Q9HBX9 757 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 TMEM63CQ9P1W3 806 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 ITGA11Q9UKX5 1188 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 AGAP1Q9UPQ3 857 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 CTNND2Q9UQB3 1225 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 SSX2IPQ9Y2D8 614 aa12.9□□□□□ -0.34
RABGGTA-218ENST00000560777 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 BICDL2A1A5D9 508 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 IKBKBO14920 756 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 SYN3O14994 580 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 CLASP2O75122 1294 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 PAX3P23760 479 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 RBP5P82980 135 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 KCNC3Q14003 757 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 MRPL58Q14197 206 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 CTC1Q2NKJ3 1217 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 DPCR1Q3MIW9 517 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 PRSS55Q6UWB4 352 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 INTS8Q75QN2 995 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 FILIP1Q7Z7B0 1213 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 EFHBQ8N7U6 833 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 PIK3R5Q8WYR1 880 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 CDCA3Q99618 268 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 PRDM6Q9NQX0 595 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 RWDD2AQ9UIY3 292 aa12.89□□□□□ -0.35
RABGGTA-218ENST00000560777 PCDHB8Q9UN66 801 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms