RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 PDXKO00764 312 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 CALUO43852 315 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 NR3C1P04150 777 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 TMEM191BP0C7N4 346 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 DLATP10515 647 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 FGFR3P22607 806 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 CREMQ03060 361 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 CAMK4Q16566 473 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 LEXMQ3ZCV2 418 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 ZNF658Q5TYW1 1059 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 PALB2Q86YC2 1186 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 PIK3R5Q8WYR1 880 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 CASP10Q92851 521 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 CCDC127Q96BQ5 260 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 MTMR12Q9C0I1 747 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 CD207Q9UJ71 328 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 PTPRJQ12913 1337 aa17.15■□□□□ 0.34
RABGGTA-206ENST00000558649 TSC2P49815 1807 aa17.14■□□□□ 0.34
RABGGTA-206ENST00000558649 BIN1O00499 593 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 ITGB3P05106 788 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 KRT19P08727 400 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 SPATA31D3P0C874 917 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 CLCN4P51793 760 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 CYP24A1Q07973 514 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 KCNC3Q14003 757 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 TJAP1Q5JTD0 557 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 CEP135Q66GS9 1140 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 PTCRAQ6ISU1 281 aaPredicted RBP17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 ANKRD54Q6NXT1 300 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 DSTYKQ6XUX3 929 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 SPATA31D4Q6ZUB0 917 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 PPFIBP1Q86W92 1011 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 NT5DC4Q86YG4 428 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 C12orf56Q8IXR9 622 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 LNX1Q8TBB1 728 aaPredicted RBP17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 CACTINQ8WUQ7 758 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 ANKRD36BP1Q96IX9 119 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 MSLNLQ96KJ4 702 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 SUSD3Q96L08 255 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 FBXL18Q96ME1 805 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 FNBP1Q96RU3 617 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 RXFP1Q9HBX9 757 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 MAN1B1Q9UKM7 699 aa17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 TIMM13Q9Y5L4 95 aaPredicted RBP17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 TCF20Q9UGU0 1960 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-206ENST00000558649 XIRP2A4UGR9 3374 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 GLUD1P00367 558 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 TNNC2P02585 160 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 TNNI1P19237 187 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 POLR2BP30876 1174 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 PRCPP42785 496 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 SURF1Q15526 300 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 VARS2Q5ST30 1063 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 PDXDC1Q6P996 788 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 CLEC17AQ6ZS10 378 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 C12orf76Q8N812 135 aaPredicted RBP17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 SPATA20Q8TB22 786 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 SLC22A17Q8WUG5 538 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 POP1Q99575 1024 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 CLSTN3Q9BQT9 956 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 MAN1C1Q9NR34 630 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 FNIP2Q9P278 1114 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 AGAP1Q9UPQ3 857 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 CDY1Q9Y6F8 540 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 SCN1AP35498 2009 aa17.13■□□□□ 0.33
RABGGTA-206ENST00000558649 UNC80Q8N2C7 3258 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 ANO9A1A5B4 782 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 PIRO00625 290 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 SYN3O14994 580 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 SPTLC1O15269 473 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 ADAM12O43184 909 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 IL9P15248 144 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 NR2F2P24468 414 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 CASP4P49662 377 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 TAF6P49848 677 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 ARPP19P56211 112 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 LILRA4P59901 499 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 PSMD6Q15008 389 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 RARS2Q5T160 578 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 TMEM184AQ6ZMB5 413 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 ANKS3Q6ZW76 656 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 WDR49Q8IV35 697 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 CSGALNACT2Q8N6G5 542 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 C1orf127Q8N9H9 656 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 APPL2Q8NEU8 664 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 OR5B17Q8NGF7 314 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 ZNF560Q96MR9 790 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 CGRRF1Q99675 332 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 LMBRD1Q9NUN5 540 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 INTS13Q9NVM9 706 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 DZANK1Q9NVP4 752 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 MTRRQ9UBK8 725 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 PCDHB8Q9UN66 801 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 TRAF3IP3Q9Y228 551 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 FRMD4BQ9Y2L6 1034 aa17.12■□□□□ 0.33
RABGGTA-206ENST00000558649 R3HCC1Q9Y3T6 440 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms