RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 JAM2P57087 298 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 ZBED6P86452 979 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 GRIK3Q13003 919 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 ZNF699Q32M78 642 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 WDR44Q5JSH3 913 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 C9orf57Q5W0N0 161 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 RRAGAQ7L523 313 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 CACNA2D4Q7Z3S7 1137 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 PPM1KQ8N3J5 372 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 CCDC150Q8NCX0 1101 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 TATDN2Q93075 761 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 ABHD10Q9NUJ1 306 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 DNAJC12Q9UKB3 198 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 AGAP1Q9UPQ3 857 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 DAAM1Q9Y4D1 1078 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 NUB1Q9Y5A7 615 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 COL4A6Q14031 1691 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 ANO9A1A5B4 782 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 POMCP01189 267 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 SYN1P17600 705 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 RBP5P82980 135 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 FPGSQ05932 587 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 PPIGQ13427 754 aaKnown RBP eCLIP12.29□□□□□ -0.44
FAM60A-206ENST00000539409 C16orf59Q7L2K0 433 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 NPAS4Q8IUM7 802 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 KAT5Q92993 513 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 KREMEN1Q96MU8 473 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 DNAJC7Q99615 494 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 UBE2TQ9NPD8 197 aaPredicted RBP12.29□□□□□ -0.44
FAM60A-206ENST00000539409 LRFN2Q9ULH4 789 aa12.29□□□□□ -0.44
FAM60A-206ENST00000539409 SCN1AP35498 2009 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 LRRC53A6NM62 1247 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 LRPAP1P30533 357 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
FAM60A-206ENST00000539409 ATICP31939 592 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 GCNT1Q02742 428 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 RAPGEF1Q13905 1077 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 NOMO2Q5JPE7 1267 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 ZNF397Q8NF99 534 aaPredicted RBP12.28□□□□□ -0.44
FAM60A-206ENST00000539409 TAF4BQ92750 862 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 HPDLQ96IR7 371 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 ARID3AQ99856 593 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 GPR88Q9GZN0 384 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 VRTNQ9H8Y1 702 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 CACNG4Q9UBN1 327 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 F8VZ95 297 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 PIRO00625 290 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 BAIAP3O94812 1187 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 CLSTN1O94985 981 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 STAU1O95793 577 aaKnown RBP12.28□□□□□ -0.44
FAM60A-206ENST00000539409 GATMP50440 423 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 EPHB4P54760 987 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 WDR5P61964 334 aaKnown RBP12.28□□□□□ -0.44
FAM60A-206ENST00000539409 E4F1Q66K89 784 aaPredicted RBP12.28□□□□□ -0.44
FAM60A-206ENST00000539409 PDXDC1Q6P996 788 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 TNS4Q8IZW8 715 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 LRRC52Q8N7C0 313 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
FAM60A-206ENST00000539409 ZMYND8Q9ULU4 1186 aaPredicted RBP12.28□□□□□ -0.44
FAM60A-206ENST00000539409 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.28□□□□□ -0.44
FAM60A-206ENST00000539409 PTPRSQ13332 1948 aa12.27□□□□□ -0.44
FAM60A-206ENST00000539409 FNDC1Q4ZHG4 1894 aaPredicted RBP12.27□□□□□ -0.44
FAM60A-206ENST00000539409 B4GALT3O60512 393 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 EFCAB14O75071 495 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 ASPAP45381 313 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 DEFB103AP81534 67 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 CUL2Q13617 745 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 DRAP1Q14919 205 aaPredicted RBP12.27□□□□□ -0.45
FAM60A-206ENST00000539409 ARHGAP44Q17R89 818 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 LRRC8AQ8IWT6 810 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 ABI1Q8IZP0 508 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 URGCPQ8TCY9 931 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 CASD1Q96PB1 797 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 PANX2Q96RD6 677 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 STK33Q9BYT3 514 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 TBC1D13Q9NVG8 400 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 MYO6Q9UM54 1294 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 HOXA2O43364 376 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 PNMA6AP0CW24 399 aaPredicted RBP12.27□□□□□ -0.45
FAM60A-206ENST00000539409 MFAP3P55082 362 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 DSC1Q08554 894 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 TUSC3Q13454 348 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 WDR72Q3MJ13 1102 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 ENOSF1Q7L5Y1 443 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 OTOP2Q7RTS6 562 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 OR8K1Q8NGG5 319 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 SPAG5Q96R06 1193 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 PAAF1Q9BRP4 392 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 KCNF1Q9H3M0 494 aa12.27□□□□□ -0.45
FAM60A-206ENST00000539409 R3HCC1Q9Y3T6 440 aaKnown RBP12.27□□□□□ -0.45
FAM60A-206ENST00000539409 LAMA2P24043 3122 aaKnown RBP12.26□□□□□ -0.45
FAM60A-206ENST00000539409 CASTOR2A6NHX0 329 aa12.26□□□□□ -0.45
FAM60A-206ENST00000539409 TBXAS1P24557 533 aaPredicted RBP12.26□□□□□ -0.45
FAM60A-206ENST00000539409 HNRNPH3P31942 346 aaKnown RBP12.26□□□□□ -0.45
FAM60A-206ENST00000539409 CLCNKBP51801 687 aa12.26□□□□□ -0.45
FAM60A-206ENST00000539409 MYO1EQ12965 1108 aa12.26□□□□□ -0.45
FAM60A-206ENST00000539409 ZNF667Q5HYK9 610 aa12.26□□□□□ -0.45
FAM60A-206ENST00000539409 SHC3Q92529 594 aa12.26□□□□□ -0.45
FAM60A-206ENST00000539409 DPF3Q92784 378 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms