RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 LIFRP42702 1097 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 MBTD1Q05BQ5 628 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 FCHO2Q0JRZ9 810 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 FUT2Q10981 343 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 PSMD2Q13200 908 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 AMHR2Q16671 573 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 ARHGAP29Q52LW3 1261 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 GLRA4Q5JXX5 417 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 PIP4P1Q86T03 277 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 RDM1Q8NG50 284 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 RPLP0P6Q8NHW5 317 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 TCP11Q8WWU5 503 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 E2F7Q96AV8 911 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 GOLGA2P5Q9HBQ8 144 aa12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 RBM28Q9NW13 759 aaKnown RBP12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 WRAP73Q9P2S5 460 aaPredicted RBP12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 NAP1L2Q9ULW6 460 aaPredicted RBP12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 RBM8AQ9Y5S9 174 aaKnown RBP12.22□□□□□ -0.45
CTNNA1-234ENST00000522227 FAM221BA6H8Z2 402 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 EML1O00423 815 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 ABLIM3O94929 683 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 APBB3O95704 486 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 ATF2P15336 505 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 RFC5P40937 340 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 CLCNKBP51801 687 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 ATXN3P54252 364 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 CACNB1Q02641 598 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 LMAN2Q12907 356 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 TMEM132AQ24JP5 1023 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 ITPRIPL2Q3MIP1 535 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 XKR9Q5GH70 373 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 NAIF1Q69YI7 327 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 TEX2Q8IWB9 1127 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 TCEAL8Q8IYN2 117 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 HDDC3Q8N4P3 179 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 OR2I1PQ8NGU4 316 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 ASAP3Q8TDY4 903 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 CAMK1GQ96NX5 476 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 MTRQ99707 1265 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 SLKQ9H2G2 1235 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 GDAQ9Y2T3 454 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 RAI2Q9Y5P3 530 aa12.21□□□□□ -0.45
CTNNA1-234ENST00000522227 GOLGA8AA7E2F4 631 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 GOLGA8BA8MQT2 603 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 PYCARD-AS1I3L0S3 204 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 ZBTB39O15060 712 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 RECQL4O94761 1208 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 TDP2O95551 362 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 CFIP05156 583 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 QARSP47897 775 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 SEMA3BQ13214 749 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 CAPSQ13938 189 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 TFDP1Q14186 410 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 DMC1Q14565 340 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 NAB2Q15742 525 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 ZNF423Q2M1K9 1284 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 USP39Q53GS9 565 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 TMEM196Q5HYL7 178 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 SLC8B1Q6J4K2 584 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 APOA5Q6Q788 366 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 NOSTRINQ8IVI9 506 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 C3orf58Q8NDZ4 430 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 UBL7Q96S82 380 aaPredicted RBP12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 GPR88Q9GZN0 384 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 SMG9Q9H0W8 520 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 OSBPL3Q9H4L5 887 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 FBRSL1Q9HCM7 1045 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 GKN1Q9NS71 199 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
CTNNA1-234ENST00000522227 LAMA5O15230 3695 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 SHROOM3Q8TF72 1996 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 PRAMEF12O95522 483 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 LIG1P18858 919 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 CDC27P30260 824 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 PFKFB3Q16875 520 aaPredicted RBP12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 GPR158Q5T848 1215 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 TRIM68Q6AZZ1 485 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 CD300LGQ6UXG3 332 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 CCNI2Q6ZMN8 369 aaPredicted RBP12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 CHD1LQ86WJ1 897 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 MARCH9Q86YJ5 346 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 EXOC8Q8IYI6 725 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 TMEFF1Q8IYR6 380 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 SPRYD3Q8NCJ5 442 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 PIP4K2CQ8TBX8 421 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 BPIFB1Q8TDL5 484 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 RUFY2Q8WXA3 655 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 CHFRQ96EP1 664 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 HNRNPABQ99729 332 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 MTA3Q9BTC8 594 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 ZMYND12Q9H0C1 365 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 TMEM74BQ9NUR3 256 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 DACH1Q9UI36 760 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 BRPF3Q9ULD4 1205 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 APC2O95996 2303 aa12.19□□□□□ -0.46
CTNNA1-234ENST00000522227 ACACAQ13085 2346 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms